Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq890 96.9 4e-15
seq1300 87.8 2e-12
seq966 87.8 2e-12
seq949 82.4 9e-11
seq733 82.4 9e-11
>seq890
Length=125401
Score = 96.9 bits (106), Expect = 4e-15
Identities = 77/90 (86%), Gaps = 2/90 (2%)
Strand=Plus/Minus
Query 158115 TATGGAAAGGTGGTCGAGTGGTTGATGGCTCTGGTCTTGAAAACCAGCGA-AGTGAGAG- 158172
|| |||| |||| ||||||||| | ||| |||||||||||||||||||| |||||||
Sbjct 24557 TAAGGAAGTGTGGCCGAGTGGTTTAAGGCACTGGTCTTGAAAACCAGCGACGGTGAGAGC 24498
Query 158173 CTTCCGTGGGTTCGAATCCCACCCTTTCCG 158202
| ||||||||||||||||||||| |||||
Sbjct 24497 CGTCCGTGGGTTCGAATCCCACCGCTTCCG 24468
>seq1300
Length=673
Score = 87.8 bits (96), Expect = 2e-12
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 17866 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGTCCG 17921
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 145 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGTCGGTTCGACTCCG 90
>seq966
Length=90452
Score = 87.8 bits (96), Expect = 2e-12
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 17866 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGTCCG 17921
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 90309 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGTCGGTTCGACTCCG 90364
>seq949
Length=99569
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/72 (86%), Gaps = 2/72 (3%)
Strand=Plus/Minus
Query 18376 TGTCCGAGTGGTTAATGGAGGCGGACTGTAAATCCGCTGGCTCTGCCTACGGGGGTTCAA 18435
|| |||||||||||| || | ||||||||||||||| ||||| |||||||| |||||||
Sbjct 1490 TGCCCGAGTGGTTAAAGGGGACGGACTGTAAATCCGTTGGCTATGCCTACGTTGGTTCAA 1431
Query 18436 ATCC--CTCCCT 18445
|||| ||||||
Sbjct 1430 ATCCAACTCCCT 1419
>seq733
Length=265776
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 17859 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 17918
|||| ||||||||||||||||||||| ||| | ||| ||| || ||||||||||||| |
Sbjct 182022 GGGGCTTTAGCTCAGTTGGTAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGACT 181963
Query 17919 CCGCTATTCTCCA 17931
|||||| |||||
Sbjct 181962 CCGCTAAGCTCCA 181950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596296026693840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |