Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031936.1 Length=49979 Score E Sequences producing significant alignments: (Bits) Value seq97 98.7 3e-16 >seq97 Length=479585 Score = 98.7 bits (108), Expect = 3e-16 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 45106 CACGCCAGCGGCGTCGAGTGCATCCAAATCACCGAGCACATGGGGTTCTGCCTCGGAAAC 45165 ||| | ||||| |||| |||||||| || ||||||| ||| | ||| |||||||| Sbjct 255893 CACCCAAGCGGTATCGAATGCATCCAGATAGCCGAGCATATGAGCTTCAATCTCGGAAAT 255834 Query 45166 GCCGTCAAGTACATCTGGCGGGCCGACCTGAAACACGATGCGATCGAGGACCTGGAGAAG 45225 ||| | || ||||||||||| ||| ||||| || || || || || ||||||||||| Sbjct 255833 GCCCTAAAATACATCTGGCGCTGCGATCTGAAGCAAGACGCAATTGAAGACCTGGAGAAA 255774 Query 45226 GCGCGCTGGTATCTGGATCGTGAGATC 45252 || || ||||| | || || || ||| Sbjct 255773 GCCCGTTGGTACATCGACCGGGAAATC 255747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159808355260758