Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1121 87.8 2e-12 >seq1121 Length=1158 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/203 (70%), Gaps = 5/203 (2%) Strand=Plus/Plus Query 50665 TACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTT---TTATCCTGTC 50721 |||| || |||||| |||| ||||||||| | | || || ||||| |||| Sbjct 949 TACCACCATGTCATACTTTAATTCAATTTTACGTTTCTGATGATAAAAAATTATCTTGTC 1008 Query 50722 AATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACG 50781 ||| |||||| | || ||||| |||||| |||||||| || | |||||||| | Sbjct 1009 AATTATATCAACGTAGTGCAGATATTTTTTTAGGAGTTCCTTTTAATATTGCTTCTTATG 1068 Query 50782 CTTTATTAACGTATTTGATCGCTCAAGCC-GTCGATATGAAACCGGGAGAATTTATTCAT 50840 | |||||||| || | || ||| || | ||| | | ||||||||||||||| Sbjct 1069 CATTATTAACAATAATGTTAGCACAAATATGTGGCTATCAG-CTAGGAGAATTTATTCAT 1127 Query 50841 ACGTTAGGAGACGCTCATATTTA 50863 || ||||| || ||||||||||| Sbjct 1128 ACTTTAGGTGATGCTCATATTTA 1150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667062700678440