Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq149 105 7e-18 >seq149 Length=636072 Score = 105 bits (116), Expect = 7e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | ||||| ||||| || || || |||||||| ||||| | || ||||| | Sbjct 239140 GGTCCCTAATATATGTATCAATCAGAAGTGAATACATTTCCGAGTGAACATTTTCCATAG 239081 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345 | ||||| || || || ||||||| || || | | ||||||||| | |||| |||| Sbjct 239080 CAATCTGGAAACCATAGAAGCATCTCGCCTCAGTCACCTGAACTTCCTGGGAGAAGCGTT 239021 Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405 | | ||||| || || || || || || || || ||||||||||||| |||||||| Sbjct 239020 CTACGAGATTCTCATTTACTATACCATCTGATGCCGCAAAAAACGCCAATACATGCTTAA 238961 Query 17406 TGAAATATTTTTC 17418 | || | | |||| Sbjct 238960 TAAAGTGTCTTTC 238948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517510698018600