Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq23 89.7 4e-13 >seq23 Length=1085908 Score = 89.7 bits (98), Expect = 4e-13 Identities = 174/252 (69%), Gaps = 9/252 (4%) Strand=Plus/Plus Query 97449 GTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGC 97508 ||| |||||||||||||| ||| || | ||||| | | | | || || ||||| || Sbjct 507227 GTCACCTTCTTCTCTATCTTTGAACCCCAAATTATCAAGAAAAGCTCTGGAACCATTCGC 507286 Query 97509 ATCCCAAATGTGCACACCAGATGCT-GCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAA 97567 |||||| || |||||||| |||| || || | ||| || ||||| || || || | Sbjct 507287 ATCCCATATATGCACACC-TTTGCTAGCTAGTTTTTTACTATCAGTCGAACCGGATATCA 507345 Query 97568 ACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGT---TAAGAGAG 97624 |||||| | |||||| | ||| ||||| ||| |||| || ||||| ||| | Sbjct 507346 TCCACAAAAGTTCTTCTATAACTCCTCTGACAAAAACTCGTTTTGTTGTAAGTAAAGGCA 507405 Query 97625 GAAAATCCTTTTCTAAGCTGTA--TCTAGACTGCATTCCAAAAACACTCAATGTTCCAAC 97682 || || |||| ||| || | | |||| |||||| ||| || |||||||| Sbjct 507406 GAGTATTATTTTTTAAAGAATACCTTTGTACTG--ATCCAAATACAGATAAGGTTCCAAC 507463 Query 97683 TCCTGTTCTGTC 97694 ||||||||||| Sbjct 507464 ACCTGTTCTGTC 507475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346761198410150