Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq445 219 5e-52 seq131 122 1e-22 seq221 118 1e-21 seq84 109 6e-19 seq124 107 2e-18 seq150 105 8e-18 seq6 105 8e-18 seq155 104 3e-17 seq147 104 3e-17 seq130 104 3e-17 seq125 104 3e-17 seq20 104 3e-17 seq1465 102 9e-17 seq179 100 3e-16 seq176 98.7 1e-15 seq56 98.7 1e-15 seq217 96.9 4e-15 seq64 91.5 2e-13 >seq445 Length=79264 Score = 219 bits (242), Expect = 5e-52 Identities = 790/1226 (64%), Gaps = 45/1226 (4%) Strand=Plus/Minus Query 96463 GGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGACAAGGTGCCC 96522 || ||||| || || |||||||| || ||| | || || |||| || ||||| Sbjct 27716 GGAGCTTACTTCGTTGAATGGGGTGTATACCCCAGGAAATTCCCCGTCGATCGTGTGCCG 27657 Query 96523 ATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAGGCGACGGTATC 96582 ||||| ||||| || ||||| | |||||||| ||||| || || || || || || || Sbjct 27656 ATTCCAAATCTCACACATCTTCTTTACGGTTTCATACCGATATGTGGGGGTGATGGCATT 27597 Query 96583 AACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCGGC 96642 || |||||| ||||| | | || |||| | || |||| ||||| || Sbjct 27596 AATGACAGTTTAAAAGAAATCGAGGGAAGTTTTCAAGCACTACAGCGTTCATGCAGTGGT 27537 Query 96643 AGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAAAA 96702 | || ||||| |||||| |||||| || || | |||| |||| ||||| |||| | Sbjct 27536 CGGGAAGATTTTAAGGTTTCCATCCATGATCCTTGGGCTGCTTTACAGAAACCTCAAAGA 27477 Query 96703 GGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGCTATTCGC 96762 ||| | ||| | ||||||||||| ||||||||||| || | ||| | ||| Sbjct 27476 GGTCTATCCTCCTGGAATGAACCTTATAAAGGCAATTTTGGTCAATTGATGTC-ATT--G 27420 Query 96763 AAACA---TAACCCTCATTTAAAAATTTTGCCTAGCATCGGTGGTTGGACACTGAGC-GA 96818 ||||| ||| || | || || ||||| || || ||||| ||||| | ||| || Sbjct 27419 AAACAAGCTAAACCAGACTTGAAGATTTTACCATCAATTGGTGGGTGGAC-TTTAGCTGA 27361 Query 96819 CCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACTCGGTTCGTGA 96878 ||||||| || ||| | || | ||| ||| | |||||| || || ||| || Sbjct 27360 TCCTTTCTTCTTCTTCACTGATAAGAGTAAGCGACAGCGATTTGTAGAATCTGTTAAAGA 27301 Query 96879 ATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTTTCCCGGCGG 96938 ||| | | ||||| || || || || || || || ||||||||||| || || || Sbjct 27300 TTTCCTTTTAACCTGGAAATTCTTTGACGGTGTTGATATTGACTGGGAGTTCCCTGGTGG 27241 Query 96939 AAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACATATGTAACACT 96998 || ||||| ||||| ||| | || | || | | ||||| || || | | Sbjct 27240 TAAAGGTGCTAACCCAGACCTCGG-AAGCCCA--GAAGATGGTGCTGTTTACGTTAGTTT 27184 Query 96999 ATTGAAAGAACTACGCCTAATGCTAGACAAACTGGGTG-------TGGTGAACAAACGCG 97051 || ||||| |||| |||||| || | | || |||| |||| Sbjct 27183 GATGGAAGAATTACGTGAAATGCTTGATGATTTATCTGCTACCACTGGT---AAAAC--- 27130 Query 97052 TGTACGAGTTGACCAGCGCCGTGGGAGCAGGCTACGATAAAATAGACGTGATAGATTACT 97111 |||||| ||||| || | | || || | || ||||| | || | |||||| Sbjct 27129 -GTACGAACTGACCTCAGCAATCAGTGCTGGATGGGACAAAATTCAGGTTGTCGATTACG 27071 Query 97112 CTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTCAAAGGCGCAT 97171 | || ||||| |||| || | || | ||||||||||| |||||||| |||| Sbjct 27070 CAAAAGCGCAACAATACATGGACCACATTTTCGTTATGAGTTACGATTTCAAAGGAGCAT 27011 Query 97172 GGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAACCCTGACG 97231 |||| || |||||| |||||||| || ||||| ||||| | ||||| ||| | | Sbjct 27010 GGTCAAATGATACTTTGGGACATCAAACTCCGTTGTATGCACCGGCATGGAATCCTAAAG 26951 Query 97232 ACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTCAAGCAAAAAGTACCTTCCAACA 97291 | | |||||||| |||| | || ||| | || | ||| || | | || | Sbjct 26950 AGACTTACACAACCGACTTCGGTGTGAAATATTTGTTAGCTCAAGGTGTGTCACCGAAAA 26891 Query 97292 AAATTGTAGTTGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGATTACAAGA 97351 | || |||||||| || || ||||| || |||| |||| ||| || | | |||| || Sbjct 26890 AGATCGTAGTTGGTGTTGCTATGTATGGTCGAGGATGGACTGGGGTTAATGGTTACGAGG 26831 Query 97352 ACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGTACATGGGAAAACGGTG 97411 ||||| ||| || ||| || || || || || ||||| |||||| || |||||| Sbjct 26830 GAAATAATCCATTCACAGGCAATGCTACTGGACCAGTCAAAGGAACATGGCAAGACGGTG 26771 Query 97412 TCGTCGATTATAGGCAA---GTTAACGATTT----TAAAAACAGTCCCGCTTACACTTAC 97464 | | |||||||| || | ||||| | || | | | || ||| Sbjct 26770 TTATTGATTATAGAGAAATCGCCAACGAAATAGCCCAAGGAAAATGGGAATTCCAC---- 26715 Query 97465 GCTTACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGAAGAGGCGTTGGAT 97524 |||||||| || ||| |||| || || || | | | ||| | || ||| Sbjct 26714 ---TACGACAATGTAGCCCAGGCTCCTTATGTCTTCAGACCATC--TACCGG----GGAC 26664 Query 97525 CTGATTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTTACAGAAT 97584 || | ||||||| | | || || | | || || | || || | ||| Sbjct 26663 CTCGTCACTTACGATAATGCAAGATCTGTTATTGAAAAGGGTAAATATGTAAGGAATAAT 26604 Query 97585 AATTTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGACAATGGCGATTTGTTAAACGCC 97644 || | |||||| | || || |||||||| |||||||||||||| ||||| | ||||| Sbjct 26603 AAACTCGGTGGTCTCTTCGCGTGGGAAATTGATGCCGACAATGGTGATTTACTGAACGCT 26544 Query 97645 ATGAACACAGGTCTGGGCAACAGCCC 97670 ||||||| ||| |||| ||||| || Sbjct 26543 ATGAACATGGGTTTGGGTAACAGTCC 26518 >seq131 Length=856804 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || | | ||||| |||| || ||||||||||| |||||||||| | Sbjct 308113 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308172 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || |||| |||||| || || || || |||| ||||||||| | || Sbjct 308173 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308232 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||||||| ||| || ||| | || | | ||||||| | ||| || Sbjct 308233 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAACATTCTCGATCGTGTCGGAGGGTTCAACT 308292 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| ||||| || |||| || ||||||||||||||||| Sbjct 308293 TCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308339 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || | | ||||| |||| || ||||||||||| |||||||||| | Sbjct 308341 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308400 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || |||| |||||| || || || || |||| ||||||||| | || Sbjct 308401 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308460 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||||||| ||| || ||| | || | | ||||||| | ||| || Sbjct 308461 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAACATTCTCGATCGTGTCGGAGGGTTCAACT 308520 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| ||||| || |||| || ||||||||||||||||| Sbjct 308521 TCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308567 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || | | ||||| |||| || ||||||||||| |||||||||| | Sbjct 308569 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308628 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || |||| |||||| || || || || |||| ||||||||| | || Sbjct 308629 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308688 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||||||| ||| || ||| | || | | ||||||| | ||| || Sbjct 308689 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAACATTCTCGATCGTGTCGGAGGGTTCAACT 308748 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| ||||| || |||| || ||||||||||||||||| Sbjct 308749 TCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308795 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || | | ||||| |||| || ||||||||||| |||||||||| | Sbjct 308797 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308856 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || |||| |||||| || || || || |||| ||||||||| | || Sbjct 308857 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308916 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||||||| |||||| ||| | || | | ||||||| | ||| || Sbjct 308917 ATTCCTTCCTTGTCCTGGATTTTAGCTTTAACATTCTCGATCGTGTCGGAGGGTTCAACT 308976 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || | ||||| |||||||| |||| || || ||||| || ||||| || Sbjct 308977 TCCAAAGTGATCGTTTTGCCAGTTAAGGTTTTCACAAAAATCTGCATCTT 309026 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| || ||||||| ||| || || | || |||| |||||| || || || Sbjct 307921 TCCTTTTGAATGTTATAATCAGACAGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAG 307980 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || |||| ||||||||| | || | | ||||||||| ||| || ||| | || Sbjct 307981 ATAAGTCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCTTTAACATTC 308040 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||| | ||| || || | ||||| ||||| || |||| || |||||| Sbjct 308041 TCGATCGTGTCGGAGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACA 308100 Query 43173 AAGATTTGCAT 43183 ||||||||||| Sbjct 308101 AAGATTTGCAT 308111 >seq221 Length=486136 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||| | ||| | || |||||||| || |||||| || || ||||| |||| Sbjct 78343 TCCGCCTCTGAGACGGAGAACTAAATGCAAGGTAGACTCCTTCTGGATGTTGTAGTCAGA 78402 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || |||||||||||||| || || || ||||| ||||| | || Sbjct 78403 AAGTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCTGGAGG 78462 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||| ||||||| || | || | | |||||| | ||| || Sbjct 78463 GATGCCTTCCTTGTCTTGGATTTTTGCCTTTACATTCTCTATGGTGTCGGAGGGTTCGAC 78522 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||||||||| || | ||||| || ||||| ||||| Sbjct 78523 TTCTAGGGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 78570 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| |||| || || || |||| || |||||||||||||| || Sbjct 78608 TCCTTCTGGATGTTGTAGTCAGAAAGTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAG 78667 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||| ||||||| || | | || ||||| |||||| ||| | || Sbjct 78668 ATCAGACGCTGTTGGTCGGGAGGGATACCTTCTTTGTCTTGGATTTTCGCTTTTACATTC 78727 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| | ||| || || | |||||||||||||| || | ||||| || Sbjct 78728 TCAATTGTGTCTGAAGGTTCGACTTCTAGGGTGATGGTTTTGCCAGTCAAGGTCTTGACG 78787 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 78788 AAGATCTGCAT 78798 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| |||| || || || |||| || |||||||||||||| || Sbjct 78836 TCCTTCTGGATGTTGTAGTCAGAAAGTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAG 78895 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||| ||||||| || | | || ||||| |||||| ||| | || Sbjct 78896 ATCAGACGCTGTTGGTCGGGAGGGATACCTTCTTTGTCTTGGATTTTCGCTTTTACATTC 78955 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| | ||| || || | |||||||||||||| || | ||||| || Sbjct 78956 TCAATTGTGTCTGAAGGTTCGACTTCTAAGGTGATGGTTTTGCCAGTCAAGGTCTTGACG 79015 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 79016 AAGATCTGCAT 79026 >seq84 Length=612729 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 116445 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 116504 Query 60124 TATACTACCGAGGAT 60138 ||||||||||||||| Sbjct 116505 TATACTACCGAGGAT 116519 >seq124 Length=522509 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 410456 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 410397 Query 60126 TACTACCGAGGATT 60139 |||||||||||||| Sbjct 410396 TACTACCGAGGATT 410383 >seq150 Length=751698 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 636560 AAAAAATTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 636619 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 636620 TGACCACTATACTACCGAAGA 636640 Score = 102 bits (112), Expect = 9e-17 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 60055 TGAAAAATTTTCTC-CTC-GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||||||| | |||| ||| ||| ||||||||||||| ||||||||||||||||||||| Sbjct 270549 TGAAAAAATATCTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 270608 Query 60113 ATACTCACCACTATACTACCGAGGA 60137 ||||| |||||||||||||||| || Sbjct 270609 ATACTGACCACTATACTACCGAAGA 270633 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 641130 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 641189 Query 60125 ATACTACCGAGGATTGAATATA 60146 |||||||||| || | | |||| Sbjct 641190 ATACTACCGAAGACTTACTATA 641211 >seq6 Length=1953610 Score = 105 bits (116), Expect = 8e-18 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 60052 TTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111 |||| ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 1135486 TTATAAAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 1135427 Query 60112 CATACTCACCACTATACTACCGAGGA 60137 ||||| |||||||||||||||| || Sbjct 1135426 GATACTGACCACTATACTACCGAAGA 1135401 >seq155 Length=416050 Score = 104 bits (114), Expect = 3e-17 Identities = 86/103 (83%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 60042 AAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGT 60101 ||||||| |||| |||| | |||| |||| ||||||||||||| |||||||||||| Sbjct 210928 AAATTAA--TTTACAAAAAGTGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGT 210985 Query 60102 GACAGGCGGACATACTCACCACTATACTACCGAGGA--TTGAA 60142 ||||||||| ||||| |||||||||||||||| || ||||| Sbjct 210986 GACAGGCGGGGATACTGACCACTATACTACCGAAGACGTTGAA 211028 >seq147 Length=647312 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| || |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 44280 AAAAGTTATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 44221 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||| ||| Sbjct 44220 TGACCACTATACTACCGAAGAT 44199 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 127269 AAAAGGTTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 127328 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||| ||| Sbjct 127329 TGACCACTATACTACCGAAGAT 127350 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 46625 AAAAGGTGTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 46684 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||| ||| Sbjct 46685 TTACCACTATACTACCGAAGAT 46706 Score = 98.7 bits (108), Expect = 1e-15 Identities = 79/93 (85%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 60047 AACGTTTATGAAAAATTT-TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACA 60105 ||||| || |||| | | |||| |||| ||||||||||||| |||||||||||||||| Sbjct 47561 AACGTGTA--AAAAGTATGTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACA 47618 Query 60106 GGCGGACATACTCACCACTATACTACCGAGGAT 60138 ||||| ||||| |||||||||||||||| ||| Sbjct 47619 GGCGGGGATACTGACCACTATACTACCGAAGAT 47651 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 50480 AAAAGGTGTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 50421 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||| ||| Sbjct 50420 TGACCACTATACTACCGAAGAT 50399 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 53428 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 53487 Query 60125 ATACTACCGAGGAT 60138 |||||||||| ||| Sbjct 53488 ATACTACCGAAGAT 53501 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 54412 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 54471 Query 60125 ATACTACCGAGGAT 60138 |||||||||| ||| Sbjct 54472 ATACTACCGAAGAT 54485 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 57292 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 57233 Query 60125 ATACTACCGAGGAT 60138 |||||||||| ||| Sbjct 57232 ATACTACCGAAGAT 57219 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 123099 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 123040 Query 60125 ATACTACCGAGGAT 60138 |||||||||| ||| Sbjct 123039 ATACTACCGAAGAT 123026 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 44644 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 44703 Query 60125 ATACTACCGAGGA 60137 |||||||||| || Sbjct 44704 ATACTACCGAAGA 44716 >seq130 Length=531438 Score = 104 bits (114), Expect = 3e-17 Identities = 72/81 (89%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 490851 AAAAATTCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 490908 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 490909 TGACCACTATACTACCGAAGA 490929 Score = 100 bits (110), Expect = 3e-16 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 60053 TATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||| ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 498230 TATAAAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 498171 Query 60113 ATACTCACCACTATACTACCGAGGA 60137 ||||| |||||||||||||||| || Sbjct 498170 ATACTGACCACTATACTACCGAAGA 498146 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 462539 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 462598 Query 60125 ATACTACCGAGGA 60137 |||||||||| || Sbjct 462599 ATACTACCGAAGA 462611 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 484802 AAAAAACATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 484743 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 484742 TGACCACTATACTACCGAAGA 484722 >seq125 Length=491055 Score = 104 bits (114), Expect = 3e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 60057 AAAAATT-TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||| || ||||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 84002 AAAAGTTGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 84061 Query 60116 CTCACCACTATACTACCGAGGA-TTGAATAT 60145 || |||||||||||||||| || ||| |||| Sbjct 84062 CTGACCACTATACTACCGAAGACTTGTATAT 84092 >seq20 Length=1221564 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 491343 AAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 491402 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||| ||| Sbjct 491403 TGACCACTATACTACCGAAGAT 491424 >seq1465 Length=1545 Score = 102 bits (112), Expect = 9e-17 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 60052 TTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111 |||| ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 799 TTATAAAAAAAGCTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 858 Query 60112 CATACTCACCACTATACTACCGAGGA 60137 ||||| |||||||||||||||| || Sbjct 859 GATACTGACCACTATACTACCGAAGA 884 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 886 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 945 Query 60125 ATACTACCGAGGA 60137 |||||||||| || Sbjct 946 ATACTACCGAAGA 958 >seq179 Length=350167 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 240009 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 240068 Query 60124 TATACTACCGAGGAT 60138 ||||||||||| ||| Sbjct 240069 TATACTACCGAAGAT 240083 >seq176 Length=968888 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 329156 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 329215 Query 60117 TCACCACTATACTACCGAGGATTG 60140 | |||||||||||||||| || || Sbjct 329216 TGACCACTATACTACCGAAGACTG 329239 >seq56 Length=833486 Score = 98.7 bits (108), Expect = 1e-15 Identities = 79/93 (85%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 60047 AACGTTTATGAAAAATTT-TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACA 60105 ||||| || |||| | | |||| |||| ||||||||||||| |||||||||||||||| Sbjct 811643 AACGTGTA--AAAAGTATGTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACA 811586 Query 60106 GGCGGACATACTCACCACTATACTACCGAGGAT 60138 ||||| ||||| |||||||||||||||| ||| Sbjct 811585 GGCGGGGATACTGACCACTATACTACCGAAGAT 811553 >seq217 Length=298866 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 298730 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 298789 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 298790 TGACCACTATACTACCGAAGA 298810 >seq64 Length=1946208 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | | |||||| | |||||| || ||||||||||||||||| || | Sbjct 785701 CCTCCTCTAAGTCTCAACACAAGATGCAAGGTAGATTCCTTTTGAATATTGTAGTCGGAT 785760 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || | || || ||||||||||| | ||||||||| || | || Sbjct 785761 AAGGTACGACCATCTTCCAATTGTTTTCCAGCGAATATCAATCGCTGCTGATCTGGTGGA 785820 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | |||||||| ||| || || | || | | ||||| | || || Sbjct 785821 ATACCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATGGTGTCAGAGGCCTCAACC 785880 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || | || |||||||| |||||||| ||||| || || || |||||||| Sbjct 785881 TCTAGGGTAATGGTTTTACCCGTTAGGGTCTTAACGAAAATCTGCATTTT 785930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571779038050600