Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017
-06-23] 5,395 sequences; 248,577,651 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq149 116 3e-21
>seq149
Length=636072
Score = 116 bits (128), Expect = 3e-21
Identities = 147/202 (73%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 13404 TTTCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATAT 13463
|||| ||| ||| |||||| ||||| |||| | ||||||||| || |||| ||
Sbjct 239149 TTTCTTTAGGGTCCCTAATATATGTATCAATCAGAAGTGAATACATTTCCGAGTGAACAT 239090
Query 13464 TTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGT 13523
||||||| || || ||||||||||| || ||||| ||||| | ||||||||||| |
Sbjct 239089 TTTCCATAGCAATCTGGAAACCATAGAAGCATCTCGCCTCAGTCACCTGAACTTCCTGGG 239030
Query 13524 AAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTA 13583
| || | |||| | | || || || ||||| || || || |||||||| || | ||
Sbjct 239029 AGAAGCGTTCTACGAGATTCTCATTTACTATACCATCTGATGCCGCAAAAAACGCCAATA 238970
Query 13584 TGTGCTTAATAAAttttttttC 13605
||||||||||| | | ||||
Sbjct 238969 CATGCTTAATAAAGTGTCTTTC 238948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430954062233790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |