Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017
-06-23] 5,395 sequences; 248,577,651 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq445 196 4e-45
>seq445
Length=79264
Score = 196 bits (216), Expect = 4e-45
Identities = 796/1243 (64%), Gaps = 25/1243 (2%)
Strand=Plus/Minus
Query 30184 GACAACAACAAACCATACACTAGAGCGACGGATCATGTGGTGGCCGGTTACTTTGTAGAG 30243
|| || |||||||||| || | || | | | | || || | | |||||| || ||
Sbjct 27758 GAAAAGAACAAACCATTCAAACAAACGTCTGGTAAAGTCGTTGGAGCTTACTTCGTTGAA 27699
Query 30244 TGGGGTGTTTACGACAGACAATATCCAGCAGACTTAGTTCCCGTCCCCAACCTTACGCAT 30303
|||||||| ||| ||| ||| || | || || || | || || || || |||
Sbjct 27698 TGGGGTGTATACCCCAGGAAATTCCCCGTCGATCGTGTGCCGATTCCAAATCTCACACAT 27639
Query 30304 CTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAACGATAGCTTAAAGCAA 30363
||| | || || || | || | || || || ||||| || || || || ||||| ||
Sbjct 27638 CTTCTTTACGGTTTCATACCGATATGTGGGGGTGATGGCATTAATGACAGTTTAAAAGAA 27579
Query 30364 GTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGTCGAGAGGATTTTAAAGTG 30423
| ||| ||| | || |||| || ||| ||||| || |||||||| ||
Sbjct 27578 ATCGAGGGAAGTTTTCAAGCACTACAGCGTTCATGCAGTGGTCGGGAAGATTTTAAGGTT 27519
Query 30424 ACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAAGGAGTGGGCGCTTGGGAC 30483
| || || ||| ||||| ||| | || ||||| |||| ||| | | | ||| |
Sbjct 27518 TCCATCCATGATCCTTGGGCTGCTTTACAGAAACCTCAAAGAGGTCTATCCTCCTGGAAT 27459
Query 30484 GATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAAAGACAC-AATCCCGACCT 30542
|| || |||||||| |||||||| ||| ||||| | ||| ||| | | || || ||| |
Sbjct 27458 GAACCTTATAAAGGCAATTTTGGTCAATTGATGTC-ATTGAAACAAGCTAAACCAGACTT 27400
Query 30543 TACGATTTTACCGTCTATTGGCGGGTGGACACTTAGC-GACCCTTTCTTTAAATTGAGTT 30601
| ||||||||| || ||||| |||||||| ||||| || |||||||| || | |
Sbjct 27399 GAAGATTTTACCATCAATTGGTGGGTGGACT-TTAGCTGATCCTTTCTTCTTCTTCACTG 27341
Query 30602 CTGCCGAAAATCG-CGCCGTTTTCGTTGAGTCCGCACGAGAGTATTTGCGCACATGGAAA 30660
| || || | || ||| || || || | ||| | | || ||||||
Sbjct 27340 ATAAGAGTAAGCGACAGCGATTT-GTAGAATCTGTTAAAGATTTCCTTTTAACCTGGAAA 27282
Query 30661 TTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGGGCGGTAAAGGTGCTAATCCCGAA 30720
|| |||||||| | || || ||||||||||| || || |||||||||||||| || ||
Sbjct 27281 TTCTTTGACGGTGTTGATATTGACTGGGAGTTCCCTGGTGGTAAAGGTGCTAACCCAGAC 27222
Query 30721 TTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGCAGTTATTGAAAGAGCTCAGAGAA 30780
| ||| |||||| ||||| | || || || || |||| | | |||
Sbjct 27221 CTCGGAAGCCCAGAA---GATGGTGCTGTTTACGTTAGTTTGATGGAAGAATTACGTGAA 27165
Query 30781 ATGCTAAACGATCTTTCTAAAGAAACAGGGAAAAAATACCAGCTCACCTCGGCGATTAGC 30840
||||| | ||| | ||| || || |||| ||| | || ||||| || || ||
Sbjct 27164 ATGCTTGATGATTTATCTGCTACCACTGGTAAAACGTACGAACTGACCTCAGCAATCAGT 27105
Query 30841 GCGGGGTACGATAAAATCTCTATAGTTAATTATGAAAATGCGCAAGAGTATCTTGATCAC 30900
|| || | || ||||| | || |||| | ||| |||||| | || | || |||
Sbjct 27104 GCTGGATGGGACAAAATTCAGGTTGTCGATTACGCAAAAGCGCAACAATACATGGACCAC 27045
Query 30901 ATTTTTGTTATGACGTACGATTTTAAAGGCGCTTGGTCTAACACGGACTTGGGATATCAC 30960
||||| ||||||| |||||||| ||||| || ||||| || |||||| ||||
Sbjct 27044 ATTTTCGTTATGAGTTACGATTTCAAAGGAGCATGGTCAAATGATACTTTGGGACATCAA 26985
Query 30961 ACTACACTTTATTCACCCTCTTGGAACGCTGAAGAAAAATATACTGCCGAGTACGCGACA 31020
||| | | ||| |||| | ||||| || |||| | || || |||| | ||
Sbjct 26984 ACTCCGTTGTATGCACCGGCATGGAATCCTAAAGAGACTTACACAACCGACTTCGGTGTG 26925
Query 31021 AAGGAGTTGTTAAAACAAAACGTCAATAGTAAGAAAATAGTGCTAGCTGTTGCAATGTAC 31080
|| | |||||| ||| || || || || || | | |||||| |||||
Sbjct 26924 AAATATTTGTTAGCTCAAGGTGTGTCACCGAAAAAGATCGTAGTTGGTGTTGCTATGTAT 26865
Query 31081 GGAAGAGGGTGGACGGGTGTGCATGACATAAAAAACAACAATCCCTTTACGGGTGTAGCT 31140
|| |||| ||||| || || ||| | || ||||| || || || |||
Sbjct 26864 GGTCGAGGATGGACTGGGGTTAATGGTTACGAGGGAAATAATCCATTCACAGGCAATGCT 26805
Query 31141 CAGGGGCCGATTAAAGGAACTTGGGAAAGTGGAGTTGTAGATTACAAAGATTT------- 31193
|| || | |||||||| ||| || || ||| | ||||| | ||| |
Sbjct 26804 ACTGGACCAGTCAAAGGAACATGGCAAGACGGTGTTATTGATTATAGAGAAATCGCCAAC 26745
Query 31194 GATA----CAAAGGTACACCGACACT-TATTATGACTCTGTAGCGCAAGCGGCATATGCG 31248
|| | | |||| | | | | | | || ||| |||||| || || | ||||
Sbjct 26744 GAAATAGCCCAAGGAAAATGGGAATTCCACTACGACAATGTAGCCCAGGCTCCTTATGTC 26685
Query 31249 TTCGCAGAGAATGT--TGGTGATCTACTTACTTACGATAACCCAACGAGTGTGCAAGCTA 31306
|| |||| || | || || || | ||||||||||| ||| ||| | |
Sbjct 26684 TT--CAGACCATCTACCGGGGACCTCGTCACTTACGATAATGCAAGATCTGTTATTGAAA 26627
Query 31307 AGGGAAAGTTTGTAATAGACAACAATTTGGGTGGTTTGTTTGCGTGGGAACTGGACGCCG 31366
|||| || | ||||| | || || | |||||| | || ||||||||| | || ||||
Sbjct 26626 AGGGTAAATATGTAAGGAATAATAAACTCGGTGGTCTCTTCGCGTGGGAAATTGATGCCG 26567
Query 31367 ACAATGGCGACATTCTTAACAGCATGAACGAGGGTTTAGGTAA 31409
||||||| || | || ||| |||||| |||||| |||||
Sbjct 26566 ACAATGGTGATTTACTGAACGCTATGAACATGGGTTTGGGTAA 26524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421223502075395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |