Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_006636.1 Length=15876 Score E Sequences producing significant alignments: (Bits) Value seq247 325 4e-85 seq179 318 6e-83 seq13 307 1e-79 seq121 306 4e-79 seq709 304 1e-78 seq545 304 1e-78 seq33 304 1e-78 seq223 298 6e-77 seq442 284 1e-72 seq140 284 1e-72 seq135 284 1e-72 seq1 251 7e-63 seq51 246 3e-61 seq234 244 1e-60 seq64 242 4e-60 seq1258 239 5e-59 seq127 170 2e-38 seq56 147 2e-31 seq3 82.4 8e-12 >seq247 Length=263828 Score = 325 bits (360), Expect = 4e-85 Identities = 307/385 (80%), Gaps = 16/385 (4%) Strand=Plus/Plus Query 6178 ATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTC 6237 ||||| ||||||||||||||| |||||||||||| || ||||||||||| ||| || Sbjct 109259 ATGATGCAAAGCATCAGAGAGTGCTTTACGATCGAA-AATTTTTTTTCGCCTCATTTT-- 109315 Query 6238 GGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACT 6297 |||||||||||||| | ||||| ||||||| ||||| ||||||||||||||| ||||||| Sbjct 109316 GGCAACTATTTTTAGTGTTATAGCCTTGTTTGTTAATGGAATCAAGATATTTTGCATACT 109375 Query 6298 ATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaatttatttagtgcaa 6357 |||||| || |||||||||||||||||| || ||| ||||||| ||||||||||| Sbjct 109376 ATTGTCGAAATAATTTAATGGAGATTAATTCTATTCTTGCTAAAAATTAATTTAGTGCAA 109435 Query 6358 tagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTAT 6417 |||||||||||||||| |||||||||| | |||||| |||| ||| |||| |||| Sbjct 109436 TAGAAACGGAAAAAAATATCAAAATAGGTCAAAAAAAATTCCTGTCCGTCA----TGTAT 109491 Query 6418 G-AACTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGAAATGttttttt 6476 | |||| | |||||||||| ||| | ||||| ||||| || ||| | ||||||| Sbjct 109492 GAAACTCCGGAAACACTGTAACTTATGAGAAAATACATTATTTGAGT----TATTTTTTT 109547 Query 6477 tttAATTCTTTGAAGGA--ATTGCAGGCCCCCTACCGCGGATGGCTATGTAACTCAGTGT 6534 |||||||||| | || |||| || | | | ||| ||||||| ||| ||||| | Sbjct 109548 TTTAATTCTT--ATCGACTATTGTAGATCATCGAATGCGAATGGCTAATTAATTCAGTAT 109605 Query 6535 CGTTTAATTGCAATTAATAAAATaa 6559 ||||||||| |||| |||||| ||| Sbjct 109606 CGTTTAATTACAATCAATAAATTAA 109630 >seq179 Length=350167 Score = 318 bits (352), Expect = 6e-83 Identities = 312/396 (79%), Gaps = 16/396 (4%) Strand=Plus/Plus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| ||||| ||||| ||||||||||||| || |||||||||||| || ||||||||| Sbjct 232513 TTGCACGACTCATGATGCGAAGCATCAGAGAATGCTTTACGATCGAAAAATTTTTTTTCG 232572 Query 6227 CCCCATATTTCGGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATA 6286 || ||| || |||||||||||| | ||||||| |||||||||||||||||||||||||| Sbjct 232573 CCTCATTTT--GGCAACTATTTT-AGTATTATAGCCTTGTTAGTTAACGGAATCAAGATA 232629 Query 6287 TTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaattt 6346 ||| ||||||||||||| ||| ||| |||||||||||||| |||||| ||||||| Sbjct 232630 TTTTGCATACTATTGTCGAGATAATTAAATGGAGATTAATTCTATACTTGCTAAAAATTA 232689 Query 6347 atttagtgcaatagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGT 6406 ||||||||||||||||| ||||||||| | ||||||| | |||||| ||| ||| || Sbjct 232690 ATTTAGTGCAATAGAAAAGGAAAAAAATGTTAAAATAGGTCAAAAAAAAATCCTGTCCGT 232749 Query 6407 CAAACGGGTATG-AACTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGA 6465 || ||||| |||| | |||||||||| ||| | | |||||| |||| || ||| Sbjct 232750 CA----TGTATGAAACTCCGGAAACACTGTAACTTTCAATAAAATCAATTATTTGAGT-- 232803 Query 6466 AATGttttttttttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATG 6523 | |||||||||| ||||| | || | ||| || | | | ||| |||||| Sbjct 232804 --TATTTTTTTTTTTATTCTAGTCGA--CAGTTGTAGATCATCGAGTGCGAATGGCTCAT 232859 Query 6524 TAACTCAGTGTCGTTTAATTGCAATTAATAAAATaa 6559 ||| ||||| |||||||||| |||| |||||| ||| Sbjct 232860 TAATTCAGTTTCGTTTAATTACAATCAATAAATTAA 232895 >seq13 Length=1808754 Score = 307 bits (340), Expect = 1e-79 Identities = 312/399 (78%), Gaps = 17/399 (4%) Strand=Plus/Minus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| | ||| ||||| ||| |||||||||||| |||||| ||||| |||||||||||| Sbjct 473796 TTGCAAGACTCATGATGCGAATCATCAGAGAGTGCTTTACGTTCGAAAAAATTTTTTTCG 473737 Query 6227 CCCCATATTTCGGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATA 6286 || ||| || |||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 473736 CCTCATTTT--GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAATCAAGATA 473679 Query 6287 TTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaattt 6346 ||| ||||||||||||| ||| | || ||||||||||||| |||||| ||| ||| Sbjct 473678 TTTTGCATACTATTGTCGAGATAACTT-ATGGAGATTAATTATATACTTGCTAAATATTA 473620 Query 6347 atttagtgcaatagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGT 6406 ||||||||||||||||||||||||||| |||||||||| | ||| || |||| |||| Sbjct 473619 ATTTAGTGCAATAGAAACGGAAAAAAATATCAAAATAGGTCAAATAAATTTC----CTGT 473564 Query 6407 CAAACGGGTATGA-ACTTTGTAAACACTGTAGCTTGCCAAAAAATCCAT---TAATTCAG 6462 | | | |||||| ||| | |||||||||| ||| | |||||| || || || || Sbjct 473563 CCATCATGTATGACACTCCGGAAACACTGTAACTTATGAGAAAATCAATTTGTATTTGAG 473504 Query 6463 TGAAATGttttttttttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCT 6520 | || |||||||||| ||||| | || |||||||| | | | ||| ||||| Sbjct 473503 TTAA--TTTTTTTTTTTTATTCTAATCGA--CAATTGCAGATCATCGAATGCGAATGGCA 473448 Query 6521 ATGTAACTCAGTGTCGTTTAATTGCAATTAATAAAATaa 6559 | ||| |||||||| || | || ||| ||||| | ||| Sbjct 473447 AATTAATTCAGTGTCATTGATTTACAACTAATACATTAA 473409 Score = 286 bits (316), Expect = 4e-73 Identities = 308/399 (77%), Gaps = 18/399 (5%) Strand=Plus/Minus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| | ||| ||||| ||||||||| ||| | |||||||||||| || ||||||||| Sbjct 480670 TTGCATGACTCATGATGCGAAGCATCACAGAATTCTTTACGATCGAATAA-TTTTTTTCG 480612 Query 6227 CCCCATATTTCGGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATA 6286 || | | || |||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 480611 CCTCCTTTT--GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAATCAAGATA 480554 Query 6287 TTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaattt 6346 ||| ||||||||||||| ||| | || ||||||||||||| |||||| ||| ||| Sbjct 480553 TTTTGCATACTATTGTCGAGATAACTT-ATGGAGATTAATTATATACTTGCTAAATATTA 480495 Query 6347 atttagtgcaatagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGT 6406 ||||||||||||||||||||||||||| |||||||||| | |||||| || |||| Sbjct 480494 ATTTAGTGCAATAGAAACGGAAAAAAATATCAAAATAGGTCAAAAAAAAATC----CTGT 480439 Query 6407 CAAACGGGTATGA-ACTTTGTAAACACTGTAGCTTGCCAAAAAATCCAT---TAATTCAG 6462 | | | |||||| ||| | |||||||||| ||| | |||||| || || || || Sbjct 480438 CCATCATGTATGACACTCCGGAAACACTGTAACTTATGAGAAAATCAATTTGTATTTGAG 480379 Query 6463 TGAAATGttttttttttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCT 6520 | || |||||||||| ||||| | || |||||||| | | | ||| ||||| Sbjct 480378 TTAA--TTTTTTTTTTTTATTCTAATCGA--CAATTGCAGATCATCGAATGCGAATGGCA 480323 Query 6521 ATGTAACTCAGTGTCGTTTAATTGCAATTAATAAAATaa 6559 | ||| |||||||| || | || ||| ||||| | ||| Sbjct 480322 AATTAATTCAGTGTCATTGATTTACAACTAATACATTAA 480284 >seq121 Length=521636 Score = 306 bits (338), Expect = 4e-79 Identities = 309/395 (78%), Gaps = 14/395 (4%) Strand=Plus/Plus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| | ||| ||||| ||||||||| ||| | |||||||||||| || ||||||||| Sbjct 266285 TTGCATGACTCATGATGCGAAGCATCACAGAATTCTTTACGATCGAATAA-TTTTTTTCG 266343 Query 6227 CCCCATATTTCGGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATA 6286 || | | || |||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 266344 CCTCCTTTT--GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAATCAAGATA 266401 Query 6287 TTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaattt 6346 ||| ||| ||| ||||| ||| |||||||| ||||||||| |||||| |||||| Sbjct 266402 TTTTGCAAACTGTTGTCGAGATAATTTAATGAAGATTAATTCTATACTTGCTAAAAATAA 266461 Query 6347 atttagtgcaatagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGT 6406 ||||||||||||||||||||||||||| |||||||||| | ||||| || ||| || Sbjct 266462 ATTTAGTGCAATAGAAACGGAAAAAAATATCAAAATAG-GTCAAAAACAAACCTGTCCGT 266520 Query 6407 CAAACGGGTATG-AACTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGA 6465 || ||||| |||| | |||||||||| ||| | |||||| |||| | ||| Sbjct 266521 CA----TGTATGAAACTCCGGAAACACTGTAACTTATGAGAAAATCAATTATT----TGA 266572 Query 6466 AATGttttttttttAATTCTTTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATGTA 6525 | | |||||||||||||||| | ||||| || | | | ||| |||||| || Sbjct 266573 ATTTTTTTTTTTTTAATTCTAATAGACAATTGTAGATCATCGAATGCGAATGGCTTATTA 266632 Query 6526 ACTCAGTGTCGTTTAATTGCAATTAATAAAATaaa 6560 | |||||||||||||||| |||||||| ||||||| Sbjct 266633 ATTCAGTGTCGTTTAATTACAATTAAT-AAATAAA 266666 >seq709 Length=10720 Score = 304 bits (336), Expect = 1e-78 Identities = 303/385 (79%), Gaps = 21/385 (5%) Strand=Plus/Plus Query 6178 ATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTC 6237 ||||| ||| | ||||||| || |||||| ||||| |||||||||||||| ||| || Sbjct 4059 ATGATGCGAATCGTCAGAGACTGCTTTACGTTCGAA-AAATTTTTTTCGCCTCATTTT-- 4115 Query 6238 GGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACT 6297 |||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||| Sbjct 4116 GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAAAAAAGATATTTTGCATACT 4175 Query 6298 ATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaatttatttagtgcaa 6357 |||||| ||| |||||||||||||||||| |||||| ||||||| ||||||||||| Sbjct 4176 ATTGTCGAGATAATTTAATGGAGATTAATTCTATACTTGCTAAAAATTAATTTAGTGCAA 4235 Query 6358 tagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTAT 6417 ||||||||| |||||| |||||||||| | |||||| |||| ||| |||| |||| Sbjct 4236 TAGAAACGG-AAAAAATATCAAAATAGGTCAAAAAA-ATTCCTGTCCGTCA----TGTAT 4289 Query 6418 G-AACTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGAAATGttttttt 6476 | |||| | |||||||||| ||| | | |||||| |||| || | ||| |||| Sbjct 4290 GAAACTCCGGAAACACTGTAACTTTCAATAAAATCAATTATTTGA-------GTTATTTT 4342 Query 6477 tttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATGTAACTCAGTGT 6534 |||| |||| | || | ||| || | | | ||| |||||| ||| ||||||| Sbjct 4343 TTTATTTCTAGTCGA--CAGTTGTAGATCATCGAGTGCGAATGGCTCATTAATTCAGTGT 4400 Query 6535 CGTTTAATTGCAATTAATAAAATaa 6559 ||||||||| |||| |||||| ||| Sbjct 4401 CGTTTAATTACAATCAATAAATTAA 4425 Score = 264 bits (292), Expect = 1e-66 Identities = 297/388 (77%), Gaps = 21/388 (5%) Strand=Plus/Minus Query 6178 ATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTC 6237 ||||| ||| | ||||||| || |||||| ||||| |||||||||||||| ||| || Sbjct 3519 ATGATGCGAATCGTCAGAGACTGCTTTACGTTCGAA-AAATTTTTTTCGCCTCATTTT-- 3463 Query 6238 GGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACT 6297 |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 3462 GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAATCAAGATATTTTGCATACT 3403 Query 6298 ATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaatttatttagtgcaa 6357 || || ||| | || ||||||||||||| || ||| ||| ||| ||||||||||| Sbjct 3402 TTTATCGAGATAACTT-ATGGAGATTAATTCTATTCTTGCTAAATATTAATTTAGTGCAA 3344 Query 6358 tagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTAT 6417 |||||||||||||||| |||||||||| | ||||| | ||| |||| |||| Sbjct 3343 TAGAAACGGAAAAAAATATCAAAATAG-GTCAAAAACAAACGTGTCCGTCA----TGTAT 3289 Query 6418 G-AACTTTGTAAACACTGTAGCTTGCCAAAAAATCCAT---TAATTCAGTGAAATGtttt 6473 | |||| | |||||||||| ||| | |||||| || || || ||| || || Sbjct 3288 GAAACTCCGGAAACACTGTAACTTATGAGAAAATCAATTTGTATTTGAGTTAA----TTA 3233 Query 6474 ttttttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATGTAACTCAG 6531 |||||| ||||| | || |||||||| | | | ||| |||||| ||| |||| Sbjct 3232 TTTTTTTATTCTAATCGA--CAATTGCAGATCATCGAATGCGAATGGCTCATTAATTCAG 3175 Query 6532 TGTCGTTTAATTGCAATTAATAAAATaa 6559 ||| ||||||| |||| |||||| ||| Sbjct 3174 CGTCCTTTAATTACAATCAATAAATTAA 3147 >seq545 Length=33278 Score = 304 bits (336), Expect = 1e-78 Identities = 303/385 (79%), Gaps = 21/385 (5%) Strand=Plus/Minus Query 6178 ATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTC 6237 ||||| ||| | ||||||| || |||||| ||||| |||||||||||||| ||| || Sbjct 27424 ATGATGCGAATCGTCAGAGACTGCTTTACGTTCGAA-AAATTTTTTTCGCCTCATTTT-- 27368 Query 6238 GGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACT 6297 |||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||| Sbjct 27367 GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAAAAAAGATATTTTGCATACT 27308 Query 6298 ATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaatttatttagtgcaa 6357 |||||| ||| |||||||||||||||||| |||||| ||||||| ||||||||||| Sbjct 27307 ATTGTCGAGATAATTTAATGGAGATTAATTCTATACTTGCTAAAAATTAATTTAGTGCAA 27248 Query 6358 tagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTAT 6417 ||||||||| |||||| |||||||||| | |||||| |||| ||| |||| |||| Sbjct 27247 TAGAAACGG-AAAAAATATCAAAATAGGTCAAAAAA-ATTCCTGTCCGTCA----TGTAT 27194 Query 6418 G-AACTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGAAATGttttttt 6476 | |||| | |||||||||| ||| | | |||||| |||| || | ||| |||| Sbjct 27193 GAAACTCCGGAAACACTGTAACTTTCAATAAAATCAATTATTTGA-------GTTATTTT 27141 Query 6477 tttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATGTAACTCAGTGT 6534 |||| |||| | || | ||| || | | | ||| |||||| ||| ||||||| Sbjct 27140 TTTATTTCTAGTCGA--CAGTTGTAGATCATCGAGTGCGAATGGCTCATTAATTCAGTGT 27083 Query 6535 CGTTTAATTGCAATTAATAAAATaa 6559 ||||||||| |||| |||||| ||| Sbjct 27082 CGTTTAATTACAATCAATAAATTAA 27058 Score = 131 bits (144), Expect = 2e-26 Identities = 97/111 (87%), Gaps = 3/111 (3%) Strand=Plus/Plus Query 6178 ATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTC 6237 ||||| ||| | ||||||| || |||||| ||||| |||||||||||||| ||| || Sbjct 27964 ATGATGCGAATCGTCAGAGACTGCTTTACGTTCGAA-AAATTTTTTTCGCCTCATTTT-- 28020 Query 6238 GGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATT 6288 |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 28021 GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAATCAAGATATT 28071 >seq33 Length=1277348 Score = 304 bits (336), Expect = 1e-78 Identities = 303/385 (79%), Gaps = 21/385 (5%) Strand=Plus/Minus Query 6178 ATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTC 6237 ||||| ||| | ||||||| || |||||| ||||| |||||||||||||| ||| || Sbjct 60516 ATGATGCGAATCGTCAGAGACTGCTTTACGTTCGAA-AAATTTTTTTCGCCTCATTTT-- 60460 Query 6238 GGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACT 6297 |||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||| Sbjct 60459 GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAAAAAAGATATTTTGCATACT 60400 Query 6298 ATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaatttatttagtgcaa 6357 |||||| ||| |||||||||||||||||| |||||| ||||||| ||||||||||| Sbjct 60399 ATTGTCGAGATAATTTAATGGAGATTAATTCTATACTTGCTAAAAATTAATTTAGTGCAA 60340 Query 6358 tagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTAT 6417 ||||||||| |||||| |||||||||| | |||||| |||| ||| |||| |||| Sbjct 60339 TAGAAACGG-AAAAAATATCAAAATAGGTCAAAAAA-ATTCCTGTCCGTCA----TGTAT 60286 Query 6418 G-AACTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGAAATGttttttt 6476 | |||| | |||||||||| ||| | | |||||| |||| || | ||| |||| Sbjct 60285 GAAACTCCGGAAACACTGTAACTTTCAATAAAATCAATTATTTGA-------GTTATTTT 60233 Query 6477 tttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATGTAACTCAGTGT 6534 |||| |||| | || | ||| || | | | ||| |||||| ||| ||||||| Sbjct 60232 TTTATTTCTAGTCGA--CAGTTGTAGATCATCGAGTGCGAATGGCTCATTAATTCAGTGT 60175 Query 6535 CGTTTAATTGCAATTAATAAAATaa 6559 ||||||||| |||| |||||| ||| Sbjct 60174 CGTTTAATTACAATCAATAAATTAA 60150 >seq223 Length=794585 Score = 298 bits (330), Expect = 6e-77 Identities = 297/376 (79%), Gaps = 13/376 (3%) Strand=Plus/Minus Query 6186 AAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTCGGCAACTA 6245 ||||||||||||||| |||||||||||| ||||||||| ||| ||| || ||||||| Sbjct 767474 AAGCATCAGAGAGTGCTTTACGATCGAAAAAATTTTTT-CGCATCATTTTA--GCAACTA 767418 Query 6246 TTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACTATTGTCTC 6305 |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 767417 TTTTTAGTATTATAGGCTTGTTAGTTAACGGAATCAAGATATTTTGCATACTATTGTCGA 767358 Query 6306 GATTATTTAATGGAGATTAATTGCATACtt-ttaaaaaatttatttagtgcaatagaaac 6364 ||| |||||||||||||||||| |||||| | ||||||| |||||||||||| |||| Sbjct 767357 GATAATTTAATGGAGATTAATTCTATACTTGCTTAAAAATTAATTTAGTGCAATGGAAAA 767298 Query 6365 ggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTATG-AACTT 6423 ||||||| | ||||| |||| | |||||| ||| ||| |||| | ||| ||||| Sbjct 767297 GGAAAAACATATCAAGATAGGTCAAAAAA-AGTCCTGTCCGTCA----TGAATGAAACTT 767243 Query 6424 TGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGAAATGttttttttttAATT 6483 || |||||||||| ||| | ||||| |||| || ||| ||| |||||||||||||| Sbjct 767242 TGAAAACACTGTAACTTATGAGAAAATTAATTATTTGAGT--AAT-TTTTTTTTTTAATT 767186 Query 6484 CTTTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATGTAACTCAGTGTCGTTTAATT 6543 ||| ||||| | | | | ||| |||||| | | |||||||| |||| || Sbjct 767185 CTTATCGACAATTGTTGATCATCGAATGCGAATGGCTCATTTATTCAGTGTCTTTTAGTT 767126 Query 6544 GCAATTAATAAAATaa 6559 ||||||||||| ||| Sbjct 767125 ACAATTAATAAATTAA 767110 >seq442 Length=82742 Score = 284 bits (314), Expect = 1e-72 Identities = 305/396 (77%), Gaps = 17/396 (4%) Strand=Plus/Minus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| ||||| ||| || |||||||||||||||| |||||| ||||| | |||||||| Sbjct 72833 TTGCACGACTCATGCTA-GAAGCATCAGAGAGTGCTTTACGTTCGAA-ACTTTTTTTTCT 72776 Query 6227 CCCCATATTTCGGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATA 6286 |||||| || |||||||||||||| ||||||| |||||||||||||| |||||||||| Sbjct 72775 CCCCATTTT--GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACATAATCAAGATA 72718 Query 6287 TTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaattt 6346 | | ||||||||||||| ||| ||||| |||||||||||| ||||| ||||||| Sbjct 72717 TCTTGCATACTATTGTCGAGATAATTTATTGGAGATTAATTCTATACTAGCTAAAAATTA 72658 Query 6347 atttagtgcaatagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGT 6406 ||||| ||||| ||||||||||||||| ||||||| || | |||||| ||| |||| Sbjct 72657 ATTTATTGCAAAAGAAACGGAAAAAAATATCAAAACAGGTCAAAAAAATTT----ACTGT 72602 Query 6407 CAAACGGGTAT-GAACTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGA 6465 | || |||| |||| | |||||||||| ||| | |||||| |||| || ||| | Sbjct 72601 CCGACATGTATAAAACTCCGGAAACACTGTAACTTATGAGAAAATCGATTATTTGAGTTA 72542 Query 6466 AATGttttttttttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATG 6523 | | || |||| ||||| | || |||||||| | | | ||| |||||| Sbjct 72541 A----TATTCTTTTTATTCTAATCGA--CAATTGCAGATCATCGAATGCGAATGGCTCAT 72488 Query 6524 TAACTCAGTGTCGTTTAATTGCAATTAATAAAATaa 6559 ||| |||| ||| ||||||| |||| |||||| ||| Sbjct 72487 TAATTCAGCGTCCTTTAATTACAATCAATAAATTAA 72452 >seq140 Length=726855 Score = 284 bits (314), Expect = 1e-72 Identities = 294/377 (78%), Gaps = 16/377 (4%) Strand=Plus/Plus Query 6190 ATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTCGGCAACTATTTT 6249 ||||||||||| |||||||||||| ||||| | || ||| ||| || |||||||||||| Sbjct 304382 ATCAGAGAGTGCTTTACGATCGAA-AAATTCTATTAGCCTCATTTT--GGCAACTATTTT 304438 Query 6250 TATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACTATTGTCTCGATT 6309 || || ||| ||||||||||||| ||||||||||||||| |||| ||||| || ||| Sbjct 304439 TAGCATCATAGCCTTGTTAGTTAATGGAATCAAGATATTTTGCATCCTATTATCGAGATA 304498 Query 6310 ATTTAATGGAGATTAATTGCATACttttaaaaaatttatttagtgcaatagaaacggaaa 6369 | ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 304499 AAATAATGGAGATTAATTCTATACTTGCTAAAAATTAATTTAGTGCAATAGAAACGGAAA 304558 Query 6370 aaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTATG-AACTTTGTAA 6428 |||| |||||||||| | |||||| ||||| ||| |||| ||||| |||| | || Sbjct 304559 AAAATATCAAAATAGGTCAAAAAA-TTTCCTGTCCGTCA----TGTATGAAACTCCGGAA 304613 Query 6429 ACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGAAATGttttttttttAATTCT--T 6486 |||||||| || | |||| | |||| || ||| || ||||||| |||||||| | Sbjct 304614 ACACTGTAAGTTATGAGAAAAACAATTATTTGAGTTAA---TTTTTTTGTTAATTCTAAT 304670 Query 6487 TGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATGTAACTCAGTGTCGTTTAATTGCA 6546 || || || | | | | || |||||| ||| |||||||||||||||| || Sbjct 304671 CGA--CAACTGTAAATCATCGAATGCTAATGGCTGATTAATTCAGTGTCGTTTAATTACA 304728 Query 6547 ATTAATAAAATaaaaaa 6563 ||||||||| ||| ||| Sbjct 304729 ATTAATAAATTAATAAA 304745 >seq135 Length=452117 Score = 284 bits (314), Expect = 1e-72 Identities = 307/397 (77%), Gaps = 20/397 (5%) Strand=Plus/Plus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| ||||| |||| |||||||||||||||| ||||||| |||||| ||||||||| Sbjct 255889 TTGCACGACTCTTGATGCGAAGCATCAGAGAGTGCTTTACGACCGAACAT-TTTTTTTCG 255947 Query 6227 CCCCATATTTCGGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATA 6286 || ||| || |||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 255948 CCTCATTTT--GGCAACTATTTTTAGTATTATAGTCTTGTTAGTTAACGGAATCAAGATA 256005 Query 6287 TTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaattt 6346 ||| | ||||||||||| ||| |||||||||||||||||| |||||| ||||||| Sbjct 256006 TTTTGTATACTATTGTCGAGATAATTTAATGGAGATTAATTCTATACTTGCTAAAAATTA 256065 Query 6347 atttagtgcaatagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGT 6406 |||| | |||||| |||||| |||||| ||||||| | || |||||| ||| ||| || Sbjct 256066 ATTTCGCGCAATAAAAACGG-AAAAAATATCAAAA-AATTAAAAAAAAAATCCTGTCCGT 256123 Query 6407 CAAACGGGTAT-GAACTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAGTGA 6465 || |||| |||| | ||||||| || ||| | |||||| |||| || ||| | Sbjct 256124 CA----TGTATAAAACTCCGGAAACACTTTAACTTATGAGAAAATCAATTATTTGAGTTA 256179 Query 6466 AATGttttttttttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATG 6523 ||||||||| ||||| | || ||||| || | | | ||| ||| ||| Sbjct 256180 -----TTTTTTTTTTATTCTAATCGA--CAATTGTAGATCATCGAATGCGAATGACTAAT 256232 Query 6524 TAACTCAGTGTCGTTTAATTGCAATTAATAAAATaaa 6560 | | ||||||||||||||| |||||||| ||||||| Sbjct 256233 TTATTCAGTGTCGTTTAATAACAATTAAT-AAATAAA 256268 >seq1 Length=6243310 Score = 251 bits (278), Expect = 7e-63 Identities = 269/348 (77%), Gaps = 13/348 (4%) Strand=Plus/Plus Query 6215 AAAtttttttCGCCCCATATTTCGGCAACTATTTTTATTAT--TATACCCTTGTTAGTTA 6272 ||| ||||| ||| ||| || |||||||| |||| |||| |||| ||| ||||| || Sbjct 2148365 AAAATTTTTGGGCCTCATTTT--GGCAACTACTTTTGTTATAGTATAGCCTGGTTAGCTA 2148422 Query 6273 ACGGAATCAAGATATTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATA 6332 ||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||| ||| Sbjct 2148423 ACGGAATCAAGATCTTT-GCATACTATTGTCGAGATGATTTAATGGAGATTAATTATATA 2148481 Query 6333 Cttttaaaaaatttatttagtgcaatagaaacggaaaaaaacatcaaaatagtttaaaaa 6392 ||| ||||||| ||||||||||||||||||||||| ||| |||||||||| | ||||| Sbjct 2148482 CTTGCTAAAAATTAATTTAGTGCAATAGAAACGGAAACAAATATCAAAATAGGTCAAAAA 2148541 Query 6393 attttCCCGTCTGTCAAACGGGTATG-AACTTTGTAAACACTGTAGCTTGCCAAAAAATC 6451 | ||||| ||| |||| ||||| |||| | ||||||| || | | | ||| || Sbjct 2148542 AATTTCCTGTCCGTCA----TGTATGAAACTCCGGAAACACTTTAACGTATGAGAAAGTC 2148597 Query 6452 CATTAATTCAGTGAAATGttttttttttAATTCTTTGAAGGAATTGCAGGCCCCCTACCG 6511 |||| || ||| | || |||||||| | |||| || ||||| || | | | Sbjct 2148598 AATTATTTGAGTTATATATTTTTTTTAT-TTTCTCCGA--CAATTGTAGATCATAGAATG 2148654 Query 6512 CGGATGGCTATGTAACTCAGTGTCGTTTAATTGCAATTAATAAAATaa 6559 || ||||||| ||| ||||||||||||| || ||||||||||| ||| Sbjct 2148655 CGAATGGCTAATTAATTCAGTGTCGTTTAGTTACAATTAATAAATTAA 2148702 >seq51 Length=834498 Score = 246 bits (272), Expect = 3e-61 Identities = 293/385 (76%), Gaps = 23/385 (6%) Strand=Plus/Minus Query 6181 ATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTCGGC 6240 || |||||||||||||| | |||||||| ||| || |||| || ||| ||| || ||| Sbjct 413375 ATCAGAAGCATCAGAGAAAGCTTTACGATTGAA-AATTTTTATTTGCCTCATTTT--GGC 413319 Query 6241 AACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACTATT 6300 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 413318 AACTATTTTTATTATTATAGCCTTGTTAGTTAACGGAATCAAGATATTTTGCATACTATT 413259 Query 6301 GTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaatttatttagtgcaatag 6360 || || |||||||||||||||||| || ||| ||||||| ||||| |||||||| Sbjct 413258 GTAGAGAAAATTTAATGGAGATTAATTCTATTCTTGCTAAAAATTAATTTACTGCAATAG 413199 Query 6361 aaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTATG-A 6419 ||| || |||||| |||||||||| | |||||| | ||||| | | ||||| | Sbjct 413198 AAATGG-AAAAAATATCAAAATAGGTCAAAAAA---AAACTCCTGTCCATCATGTATGCA 413143 Query 6420 ACTTTGTAAACACTGTAGCT-TGCCAAAAAATCCATTAATTCAGTGAAATGtt---tttt 6475 || |||||| || || || | |||||| |||| | |||||| || |||| Sbjct 413142 ACACCAGAAACAC--TAACTATG--AGAAAATCAATTATT----TGAAATATTTAATTTT 413091 Query 6476 ttttAAT-TCTTTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCTATGTAACTCAGTGT 6534 ||||||| | | || ||||| || | || || ||||||| ||| ||| ||| Sbjct 413090 TTTTAATCTAATCGA--CAATTGTAGATCATTGACTGCAAATGGCTAATTAATTCAATGT 413033 Query 6535 CGTTTAATTGCAATTAATAAAATaa 6559 | ||||||| ||||||||||| ||| Sbjct 413032 CATTTAATTACAATTAATAAATTAA 413008 >seq234 Length=648534 Score = 244 bits (270), Expect = 1e-60 Identities = 221/275 (80%), Gaps = 15/275 (5%) Strand=Plus/Minus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| ||||| ||||| ||||| |||||||||| |||||||||||| || ||||| || Sbjct 12135 TTGCACGACTCATGATGCGAAGCTTCAGAGAGTGCTTTACGATCGAAAAAGTTTTT--CG 12078 Query 6227 CCCCATATTTCGGCAACTATTTTTATTATTAT------ACCCTTGTTAGTTAACGGAATC 6280 || ||| || |||||||||||||| |||||| | ||||||||||||| |||||| Sbjct 12077 CCTCATTTT--GGCAACTATTTTTAGTATTATTAGTTTAGCCTTGTTAGTTAATGGAATC 12020 Query 6281 AAGATATTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaa 6340 ||||||||| ||||||||||||| ||| |||||||||||||||||| |||||| || Sbjct 12019 AAGATATTTTGCATACTATTGTCGAGATAATTTAATGGAGATTAATTCTATACTTGCTAA 11960 Query 6341 aaatttatttagtgcaatagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCC 6400 ||||| |||||| |||||||||| ||||||||| |||||||||| | |||||| ||| Sbjct 11959 AAATTAATTTAGGGCAATAGAAAAGGAAAAAAATATCAAAATAGGTCAAAAAAATTTTGT 11900 Query 6401 GTCTGTCAAACGGGTATG-AACTTTGTAAACACTG 6434 || |||| ||||| |||| | |||||||| Sbjct 11899 GTTCGTCA----TGTATGAAACTCCGGAAACACTG 11869 >seq64 Length=1946208 Score = 242 bits (268), Expect = 4e-60 Identities = 295/398 (74%), Gaps = 33/398 (8%) Strand=Plus/Minus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| ||||| ||| | |||||||||||||||| |||||||||||| ||||| ||||| Sbjct 946719 TTGCACGACTCATGCTGCGAAGCATCAGAGAGTGCTTTACGATCGAA-AAATTAGTTTCG 946661 Query 6227 CCCCATATTTCGGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATA 6286 || ||| || ||||||||| |||| ||||||| |||||||||||||||||||| ||||| Sbjct 946660 CCTCAT--TTAGGCAACTATATTTAGTATTATAGCCTTGTTAGTTAACGGAATCTAGATA 946603 Query 6287 TTTAGCATACTATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaattt 6346 ||| ||||||||||||| ||||| | || |||||| ||||||| Sbjct 946602 TTTTGCATACTATTGTC--------------GAGATAATTTCTATACTTGCTAAAAATTA 946557 Query 6347 atttagtgcaatagaaacggaaaaaaac---atcaaaatagtttaaaaaattttCCCGTC 6403 ||||||||||||||||| ||||||| |||||||||| | ||||| ||| ||| Sbjct 946556 ATTTAGTGCAATAGAAATTAAAAAAAAATATATCAAAATAGGTCCAAAAAAATTCTTGTC 946497 Query 6404 TGTCAAACGGGTATGAA-CTTTGTAAACACTGTAGCTTGCCAAAAAATCCATTAATTCAG 6462 ||| | ||||| || | |||||||||| ||| | |||||| |||| | || Sbjct 946496 CTTCAT----GAATGAAACTCCGGAAACACTGTAACTTATGAGAAAATCAATTATTCGAG 946441 Query 6463 TGAAATGttttttttttAATTCT--TTGAAGGAATTGCAGGCCCCCTACCGCGGATGGCT 6520 | || |||||||||||| || | || ||||| || | | | ||| |||||| Sbjct 946440 TTAA----TTTTTTTTTAATCCTAATCGAC--AATTGTAGATCATCGAATGCGAATGGCT 946387 Query 6521 ATGTAACTCAGTGTCGTTTAATTGCAATTAATAAAATa 6558 | ||| |||||||||||||||| |||||||||| || Sbjct 946386 AACTAATTCAGTGTCGTTTAATTATAATTAATAAATTA 946349 >seq1258 Length=3912 Score = 239 bits (264), Expect = 5e-59 Identities = 241/306 (79%), Gaps = 13/306 (4%) Strand=Plus/Minus Query 6178 ATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCGCCCCATATTTC 6237 ||||| ||| | ||||||| || |||||| ||||| |||||||||||||| ||| || Sbjct 2939 ATGATGCGAATCGTCAGAGACTGCTTTACGTTCGAA-AAATTTTTTTCGCCTCATTTT-- 2883 Query 6238 GGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAGATATTTAGCATACT 6297 |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 2882 GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAATCAAGATATTTTGCATACT 2823 Query 6298 ATTGTCTCGATTATTTAATGGAGATTAATTGCATACttttaaaaaatttatttagtgcaa 6357 || || ||| | || ||||||||||||| || ||| ||| ||| ||||||||||| Sbjct 2822 TTTATCGAGATAACTT-ATGGAGATTAATTCTATTCTTGCTAAATATTAATTTAGTGCAA 2764 Query 6358 tagaaacggaaaaaaacatcaaaatagtttaaaaaattttCCCGTCTGTCAAACGGGTAT 6417 |||||||||||||||| |||||||||| | ||||| | ||| |||| |||| Sbjct 2763 TAGAAACGGAAAAAAATATCAAAATAG-GTCAAAAACAAACGTGTCCGTCA----TGTAT 2709 Query 6418 G-AACTTTGTAAACACTGTAGCTTGCCAAAAAATCCAT---TAATTCAGTGAAATGtttt 6473 | |||| | |||||||||| ||| | |||||| || || || ||| || | |||| Sbjct 2708 GAAACTCCGGAAACACTGTAACTTATGAGAAAATCAATTTGTATTTGAGTTAATTATTTT 2649 Query 6474 tttttt 6479 ||| || Sbjct 2648 TTTATT 2643 >seq127 Length=591228 Score = 170 bits (188), Expect = 2e-38 Identities = 129/150 (86%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 6164 ATTTTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttt 6223 || ||| ||||| ||||| ||||| ||||| |||| ||||||||||| ||||||||| Sbjct 210628 ATATTGCACGACTCATGATGCGAAGCGTCAGACAGTGCTTTACGATCGAT-AAATTTTTT 210570 Query 6224 tCGCCCCATATTTCGGCAACTATTTTTATTATTATACCCTTGTTAGTTAACGGAATCAAG 6283 ||||| ||| || |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 210569 TCGCCTCATTTT--GGCAACTATTTTTAGTATTATAGCCTTGTTAGTTAACGGAATCAAG 210512 Query 6284 ATATTTAGCATACTATTGTCTCGATTATTT 6313 |||||| ||||||||||||| ||| |||| Sbjct 210511 ATATTTTGCATACTATTGTCGAGATAATTT 210482 >seq56 Length=833486 Score = 147 bits (162), Expect = 2e-31 Identities = 177/237 (75%), Gaps = 13/237 (5%) Strand=Plus/Minus Query 6324 AATTGCATACttttaaaaaatttatttagtgcaatagaaacggaaaaaaacatcaaaata 6383 |||| |||||| ||||||| ||||||| ||||||||||||||||||| || ||| || Sbjct 590530 AATTCTATACTTGCTAAAAATTAATTTAGTTCAATAGAAACGGAAAAAAATATGAAATTA 590471 Query 6384 gtttaaaaaattttCCCGTCTGTCAAACGGGTATG-AACTTTGTAAACACTGTAGCTTGC 6442 | | |||||| ||||| ||| |||| ||||| ||||| | |||||||||| ||| Sbjct 590470 GGTCAAAAAAATTTCCTGTCCGTCAT----GTATGCAACTTCGGAAACACTGTAACTTAT 590415 Query 6443 CAAAAAATCCATTAATTCAGTGAAATGttttttttttAATTCTTTGAAGGAATTGCAGGC 6502 | |||| | |||| || ||| ||| |||||||| |||| || ||||| || Sbjct 590414 TAGAAAAACAATTATTTGAGT--AATTTTTTTTTTCTAATC----GAC--AATTGTAGAT 590363 Query 6503 CCCCTACCGCGGATGGCTATGTAACTCAGTGTCGTTTAATTGCAATTAATAAAATaa 6559 | | ||| |||||| ||| |||||||||||||||| ||||||||||| ||| Sbjct 590362 CGTTGAATGCGAATGGCTTATTAATTCAGTGTCGTTTAATTACAATTAATAAATTAA 590306 Score = 147 bits (162), Expect = 2e-31 Identities = 177/237 (75%), Gaps = 13/237 (5%) Strand=Plus/Plus Query 6324 AATTGCATACttttaaaaaatttatttagtgcaatagaaacggaaaaaaacatcaaaata 6383 |||| |||||| ||||||| ||||||| ||||||||||||||||||| || ||| || Sbjct 590694 AATTCTATACTTGCTAAAAATTAATTTAGTTCAATAGAAACGGAAAAAAATATGAAATTA 590753 Query 6384 gtttaaaaaattttCCCGTCTGTCAAACGGGTATG-AACTTTGTAAACACTGTAGCTTGC 6442 | | |||||| ||||| ||| |||| ||||| ||||| | |||||||||| ||| Sbjct 590754 GGTCAAAAAAATTTCCTGTCCGTCAT----GTATGCAACTTCGGAAACACTGTAACTTAT 590809 Query 6443 CAAAAAATCCATTAATTCAGTGAAATGttttttttttAATTCTTTGAAGGAATTGCAGGC 6502 | |||| | |||| || ||| ||| |||||||| |||| || ||||| || Sbjct 590810 TAGAAAAACAATTATTTGAGT--AATTTTTTTTTTCTAATC----GAC--AATTGTAGAT 590861 Query 6503 CCCCTACCGCGGATGGCTATGTAACTCAGTGTCGTTTAATTGCAATTAATAAAATaa 6559 | | ||| |||||| ||| |||||||||||||||| ||||||||||| ||| Sbjct 590862 CGTTGAATGCGAATGGCTTATTAATTCAGTGTCGTTTAATTACAATTAATAAATTAA 590918 >seq3 Length=1815429 Score = 82.4 bits (90), Expect = 8e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 6167 TTGGACGACCGATGATAAGAAGCATCAGAGAGTGGTTTACGATCGAACAAAtttttttCG 6226 ||| ||||| ||||| |||||||||||||||| |||||||||||| |||||||||||| Sbjct 458134 TTGCACGACTCATGATGCGAAGCATCAGAGAGTGCTTTACGATCGAA-AAATTTTTTTCG 458192 Query 6227 CCCCATATTTCGGCAA 6242 || ||||| ||||| Sbjct 458193 --CCTTATTTTGGCAA 458206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50681638298015