Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_006638.1 Length=15230 Score E Sequences producing significant alignments: (Bits) Value seq80 1110 0.0 seq639 1077 0.0 seq216 661 0.0 >seq80 Length=626719 Score = 1110 bits (1230), Expect = 0.0 Identities = 857/1016 (84%), Gaps = 18/1016 (2%) Strand=Plus/Minus Query 9141 CATTGAACCACGACACCGTATTTGAATCGAATCTCTTGAATCTTACTGTGCAAAGTATTG 9200 |||| |||||| ||||| |||||||| |||||||||||||| |||||||| |||||| | Sbjct 504756 CATTCAACCACCACACCATATTTGAACCGAATCTCTTGAATTTTACTGTGTAAAGTACTA 504697 Query 9201 AGAATAGGTTGTATGTCAGTATTCCAACCACGTTGGAGTCCGTGCTCTAAAACAAAATTT 9260 ||||||||| ||| ||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 504696 AGAATAGGTCGTAAGTCAGTATTCCAACCACGTTGTAGTCCGTGATCTAAAACGAAATTC 504637 Query 9261 AACAGTACTGTACACGCATGATCATCTAATTCTGGCCTAGCATTAGATCCAACATTATCA 9320 |||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 504636 AACAGTACCGTAGCCGCATGATCATCTAATTCTGGCCTCGCATTAGATCGAACATTATCA 504577 Query 9321 GAAGCCTGCGCTCTCTCAGTAATTGATAAACAAACACTCAGTGCTTTTCTGTTGAATACT 9380 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 504576 GAAGCCTGCGCTCTCTCAGCAATTGATAAACAAACACTCAGTGCTTTTCTGTTGAACACT 504517 Query 9381 GCTAATAATAATCGTCGTGCTAATGATTTGCAATCTTTTGATACTTGCTGACAGTATTTG 9440 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 504516 GCTGATAATAATCGTAGTGCTAATGATTTGCAATCTTTTGATACTTGCTGACAGTATTTG 504457 Query 9441 AGGTCTCCGTAGCTGACCCAAACACCCCTTTGAGGCCTAAGTTCTATGAGACCTGGCAGA 9500 ||||||||||||||||| ||||| | ||||||||| | ||||||| ||| ||||||||| Sbjct 504456 AGGTCTCCGTAGCTGACGTAAACAGCACTTTGAGGCATGAGTTCTACGAGTCCTGGCAGA 504397 Query 9501 TTAGTCCGATACTTCAATGTCCATTTTGTATCATGAGGATCATATTCCGGTGGTAGGACA 9560 || || |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 504396 TTGGTTCGATACTTCAATGTCCATTTTGTATCATGAGGATCATATTCCGGTGGTAGAACA 504337 Query 9561 AAACGCCATGAGTTGTATTTTTTCTTCGGTGGTTCGTTAGCATCGTCGTTACTATGTTGA 9620 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || Sbjct 504336 AAACGCCATGAGTTGCGTTTTTTCTTCGGTGGTTCGTTAGCATCGTCATTACTATGTCGA 504277 Query 9621 TCTTGAGTAATGGAACTAGTACTTGCTGTTACTTCAGTGTGTCTTCTTTTAGGAGACTTT 9680 ||||| ||| | |||||||||||||||||||||||||||||||| |||||||| || Sbjct 504276 TCTTGGGTACTTGAACTAGTACTTGCTGTTACTTCAGTGTGTCTCTTTTTAGGAAACCGA 504217 Query 9681 CGGACTTCTGGTTTCGAGTTAATCGAAAAAGATTTATTGTCGGCTGAATTTTGCGTTGAG 9740 ||||||||||||||| ||||||||||||||||||||||| | | ||||||| ||||| Sbjct 504216 CGGACTTCTGGTTTCAAGTTAATCGAAAAAGATTTATTGCTGATTAAATTTTGTGTTGAA 504157 Query 9741 TTGAATTGTTCGACTGCACCTAGTAACTTTTTATATGTCTGGGCAGTGTCAAGGATTGAA 9800 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct 504156 TTTAATTGTTCGACTGCACCCAGTAACTTTTTATATGTCTGGGCGGTGTCAAGGATCGAA 504097 Query 9801 CTTCGTAAGGTGCTGTACATATCAGTAGTATAACGCAAAGTAGAGCTTATTTGAGTGAAG 9860 || ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 504096 CTCCGTAAGGTGTTGTACATATCAGTAGTATAACGCAAAGTAGACCCCATTTGAGTGAAG 504037 Query 9861 AGGTCAGCAAAGTTGTTCAATATTCCCTGCTCTAAAGAAGACCTGACATCAGTAGAA-GA 9919 ||| ||| ||||||| ||| ||| ||||||||| ||| | ||||| | Sbjct 504036 AGGGTAGCGAAGTTGTCCAACATTTGCTGCTCTAA---------TACAACTTTAGAATGC 503986 Query 9920 GTTTATTGAT--GTAGAATTTTCAGCAGTTGTTGGCCTGTCTGCGGAGCTACTTGCAGGA 9977 || | |||| || || ||||| |||| | | || ||||||| |||| || ||| | Sbjct 503985 GTCTGGTGATTCGTGGAGTTTTCTGCAGCTATCGGTCTGTCTGTACAGCTTTTTCCAGAA 503926 Query 9978 GTGATTTCAGTGCTGGTGCTATCATTTATTCTCTCAACAGGTGCTCTGTCTGTAGACAAC 10037 |||||| ||| || | | ||| |||| |||| ||||||| |||| ||||| | Sbjct 503925 GTGATTCCAGGGCCGTAAAAGTTATTCGTTCTTTCAATAGGTGCTTCATCTGCAGACATC 503866 Query 10038 TCGTGGTCTAAAATTCCTTC---ATCCGTAACTGTATCGGAATCTGAAGTTACCGCATAA 10094 || || ||| | ||| |||| ||| ||| |||||||||||||| || || ||| | Sbjct 503865 TCATGATCTGAGATTACTTCATGATCGGTACTAATATCGGAATCTGAATTTGCCCCATGA 503806 Query 10095 TGTGGTGACACAGGTTTTAC---GACGCACTCGCCTGTTTGACGCGTATTGTCTAT 10147 || | |||| || || | | | ||||| |||||||| ||||||||| || Sbjct 503805 TGCGCTGACGGAGTTTCTTCTTTCATCCACTCACCTGTTTGCAACGTATTGTCAAT 503750 Score = 394 bits (436), Expect = 9e-106 Identities = 654/939 (70%), Gaps = 32/939 (3%) Strand=Plus/Minus Query 11343 TTGGAAGCAGCAGCAGTTTCTTGTGTCTGAGTGAGTTTCG-TTGATCGGTTGTCTTGAAT 11401 |||||| || || |||| || ||||| || || |||| ||| | ||||| | | Sbjct 502782 TTGGAATCACTAGTAGTTGTTTCTGTCTCAGC-AGATTCGATTGGTTGGTTGACCCGTGC 502724 Query 11402 GTTGGTCGATTGTTCCCTTATTGA---------CTCTGTATTAGCGTCGGTAACAGAATC 11452 | | |||| |||||| | |||| ||||| |||||||||||||||| | | Sbjct 502723 GATAATCGACTGTTCCTGTCTTGAAGATCCAGGCTCTGCATTAGCGTCGGTAACAACAGC 502664 Query 11453 GCTAGATGGCTTAGCAGCTTTCTTCAGTTTAAACCGTTTTCCATCAAGTTGTTCGTTCAG 11512 |||||||| || |||||| | |||||| | || || ||||||||||||| |||| | Sbjct 502663 GCTAGATGACTGAGCAGCGTCACCCAGTTTCATTCGCTTCCCATCAAGTTGTTTGTTCGG 502604 Query 11513 TTCTGGTAAACTTGGTCGCGTGATTAATGTTCTCGGCAGTGGTTTCCGAGGATTATCATT 11572 || |||| |||||| | ||| || ||| || |||||||||||| |||||||||| Sbjct 502603 TTTTGGT------GGTCGCTTAATTGATATTCCTGGTAGTGGTTTCCGAAGATTATCATT 502550 Query 11573 AAATTTCGACGAGTTACCTTGAGTGGAATTCCGCGAATTCAGGTTCGGCGCAGATTCTGG 11632 ||||||||||| | | | | | | ||| | ||| || | | | ||| Sbjct 502549 TAATTTCGACGAATGGTTTCGGTTCGCAACACGCAATTTCTTATTTAATGGGAAGTTTGG 502490 Query 11633 TTGCGTATCTATAAATAAAAATTTTTATTACTATTCAGAAG-CTTGAAATTTAAAACAAG 11691 || | | || |||| |||| || |||| |||| || | ||| |||||| ||| ||| Sbjct 502489 TTCTGAAACTGGAAATGAAAAGATTGATTATTATTTCGAGGGCTTTAAATTTGAAATAAG 502430 Query 11692 CAATATTCAAAAAAGTATTTTCAATGGAAATTCAATCGTGAAGACTGATAAATTTATTTG 11751 ||| |||| |||| ||||||||||| |||| | |||||| ||||| ||||| Sbjct 502429 TTGTATCTGAAAATAAATTTACAATGGAAATTAAATCTTTAAGACTAATAAAGTTATTCA 502370 Query 11752 ATTCTTACCAGGCATTTTTCTTGTTTCTCTTTCTACTAAAAGTCGATGATCATTTCTTGA 11811 ||||| ||| | || || || |||| |||||||||| ||| || ||||||||| | Sbjct 502369 ATTCTCACCTG---TTGTTTTTAATTCTTCTTCTACTAAAGGTCCATAATCATTTCTCGT 502313 Query 11812 CGCTGTCCAAGCTTCTGCATTTTGGTAACTATCTGAAAAGANNNNNNNNNNATTCTTATT 11871 ||| ||||| |||||||| | ||||||||||||||| | | | ||||| Sbjct 502312 CGCAATCCAATATTCTGCATCTCCGTAACTATCTGAAAAAAATAAAAA---AATATTATT 502256 Query 11872 TTATCTTAATTTCTGAGA-TATTGTGAATCTGATCATACTTTAGCGATAAAACACAA--- 11927 || ||| |||||||||| ||| | || || ||||| | ||| || ||| Sbjct 502255 TTCTCTCAATTTCTGAGCCTATCTAGGTTCAAAT-ATACTGCGACAATACTACGCAAAAC 502197 Query 11928 CGAATTGATTAATGAAATTATTTAAACTCACTTGAGTGATATTTGACGGCAGCCATAAAA 11987 | ||| | |||| | | ||| |||||||||||| | |||||| ||| ||||||| || Sbjct 502196 CAAATCAACTAATACATTGATTCAAACTCACTTGATTCATATTTAACGATAGCCATATAA 502137 Query 11988 AATTTCCACTCATGATCGCATTTTTCCTTTCTTTTAACGCGATCTCTTGTGAGGGAAGGA 12047 | |||||||| | || | | | ||| |||| | |||||||||||| ||| | ||||| Sbjct 502136 CAGTTCCACTCGTCATTGTGTCTCTCCCTTCTATAAACGCGATCTCTGGTGTTGAAAGGA 502077 Query 12048 TCTTCGCCTGTAGGGTAGGTAACAACAGCTTTCATATCGTGTACTTTATGTACCATTACC 12107 |||||| || ||||||| | |||| || ||| ||| ||||| |||| || | | Sbjct 502076 TCTTCGTCTTTAGGGTACGCAACAGTGGCCTTCTGATCCGTCGCTTTACGTACTATCAGC 502017 Query 12108 CAAGTGTGTGGTACGCATACGTAATCATCAATACCTTCATAAGGCAAGTCCAAGAATTGA 12167 |||| || ||||||||||| ||||||||||||||| ||||||| || | ||| ||| Sbjct 502016 CAAGCCGACGGCACGCATACGTAGTCATCAATACCTTCAAAAGGCAATTCTATGAACTGA 501957 Query 12168 ACAACATAGAATGCCGGCTTA---TCACTTTTACGTGTCATATGAAACGATCCAAAACAT 12224 || || | || || || || | | | | |||| |||| |||||| | |||| | Sbjct 501956 ACGACGGAAAACGCTCGCCTATAGTTATTATGACGTTTCATCTGAAACAAATAAAAATAC 501897 Query 12225 TTCCGCTAATGCTAAGTAAAACGATATTATCAAAACAAC 12263 || || ||| | ||||||| |||||| ||||| |||| Sbjct 501896 TTTCGTAAATTCAAAGTAAATCGATATGGTCAAAGCAAC 501858 Score = 102 bits (112), Expect = 8e-18 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 10323 AGAACAGATGACTGCACTTTCTTTT-TGACCTCTTGAAGAGTAGGCATTTGCGTTTCTTT 10381 |||| || |||| || ||||||| |||| ||||||| |||| |||| |||| Sbjct 503622 AGAATAGGTGACAGCG-TTTCTTTCGTGAC---TTGAAGAATAGGTGCTTGCCGG-CTTT 503568 Query 10382 TTGTAGTTCGTTCGAGACGCTAGTACGTATATCCGGTATCTGCGGTTGTCGCTGTGAGTC 10441 | | | |||| |||| |||| || ||| | |||| | || ||||| || |||||||| Sbjct 503567 TGG--GCTCGTCAGAGATGCTAATATATATTTTCGGTTTTTGTGGTTGCCGTTGTGAGTC 503510 Query 10442 TTGCTGATTCGACTGTGACGGTCTCTGTTGTGGAAATTTGGAAGTCTGATACAACGGATT 10501 ||||||| | ||| ||| ||||||||||||| ||||| |||||||||||||| | Sbjct 503509 TTGCTGAGATGGCTGCGACTCACTCTGTTGTGGAAGCTTGGAGATCTGATACAACGGACT 503450 Query 10502 GGATGGTTTCGTTAAAATTTGTCCAGTAGATGGAATA 10538 ||| || | || ||||||| | |||||| || Sbjct 503449 GGAAGGGACAATAGAATTTTGTCCGATGGATGGAGTA 503413 >seq639 Length=14582 Score = 1077 bits (1194), Expect = 0.0 Identities = 851/1020 (83%), Gaps = 29/1020 (3%) Strand=Plus/Minus Query 9141 CATTGAACCACGACACCGTATTTGAATCGAATCTCTTGAATCTTACTGTGCAAAGTATTG 9200 |||| |||||| ||||| |||||||| |||||||||||||| |||||||| |||||| | Sbjct 12677 CATTCAACCACCACACCATATTTGAACCGAATCTCTTGAATTTTACTGTGTAAAGTACTA 12618 Query 9201 AGAATAGGTTGTATGTCAGTATTCCAACCACGTTGGAGTCCGTGCTCTAAAACAAAATTT 9260 ||||||||| ||| ||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 12617 AGAATAGGTCGTAAGTCAGTATTCCAACCACGTTGTAGTCCGTGATCTAAAACGAAATTC 12558 Query 9261 AACAGTACTGTACACGCATGATCATCTAATTCTGGCCTAGCATTAGATCCAACATTATCA 9320 |||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 12557 AACAGTACCGTAGCCGCATGATCATCTAATTCTGGCCTCGCATTAGATCGAACATTATCA 12498 Query 9321 GAAGCCTGCGCTCTCTCAGTAATTGATAAACAAACACTCAGTGCTTTTCTGTTGAATACT 9380 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 12497 GAAGCCTGCGCTCTCTCAGCAATTGATAAACAAACACTCAGTGCTTTTCTGTTGAACACT 12438 Query 9381 GCTAATAATAATCGTCGTGCTAATGATTTGCAATCTTTTGATACTTGCTGACAGTATTTG 9440 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 12437 GCTGATAATAATCGTAGTGCTAATGATTTGCAATCTTTTGATACTTGCTGACAGTATTTG 12378 Query 9441 AGGTCTCCGTAGCTGACCCAAACACCCCTTTGAGGCCTAAGTTCTATGAGACCTGGCAGA 9500 ||||||||||||||||| ||||| | ||||||||| | ||||||| ||| ||||||||| Sbjct 12377 AGGTCTCCGTAGCTGACGTAAACAGCACTTTGAGGCATGAGTTCTACGAGTCCTGGCAGA 12318 Query 9501 TTAGTCCGATACTTCAATGTCCATTTTGTATCATGAGGATCATATTCCGGTGGTAGGACA 9560 || || |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 12317 TTGGTTCGATACTTCAATGTCCATTTTGTATCATGAGGATCATATTCCGGTGGTAGAACA 12258 Query 9561 AAACGCCATGAGTTGTATTTTTTCTTCGGTGGTTCGTTAGCATCGTCGTTACTATGTTGA 9620 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || Sbjct 12257 AAACGCCATGAGTTGCGTTTTTTCTTCGGTGGTTCGTTAGCATCGTCATTACTATGTCGA 12198 Query 9621 TCTTGAGTAATGGAACTAGTACTTGCTGTTACTTCAGTGTGTCTTCTTTTAGGAGACTTT 9680 ||||| |||||||||||||||||||||||||||| |||||||| || Sbjct 12197 TCTTG-----------TAGTACTTGCTGTTACTTCAGTGTGTCTCTTTTTAGGAAACCGA 12149 Query 9681 CGGACTTCTGGTTTCGAGTTAATCGAAAAAGATTTATTGTCGGCTGAATTTTGCGTTGAG 9740 ||||||||||||||| ||||||||||||||||||||||| | | ||||||| ||||| Sbjct 12148 CGGACTTCTGGTTTCAAGTTAATCGAAAAAGATTTATTGCTGATTAAATTTTGTGTTGAA 12089 Query 9741 TTGAATTGTTCGACTGCACCTAGTAACTTTTTATATGTCTGGGCAGTGTCAAGGATTGAA 9800 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct 12088 TTTAATTGTTCGACTGCACCCAGTAACTTTTTATATGTCTGGGCGGTGTCAAGGATCGAA 12029 Query 9801 CTTCGTAAGGTGCTGTACATATCAGTAGTATAACGCAAAGTAGAGCTTATTTGAGTGAAG 9860 || ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 12028 CTCCGTAAGGTGTTGTACATATCAGTAGTATAACGCAAAGTAGACCCCATTTGAGTGAAG 11969 Query 9861 AGGTCAGCAAAGTTGTTCAATATTCCCTGCTCTAAAGAAGACCTGACATCAGTAGAA-GA 9919 ||| ||| ||||||| ||| ||| ||||||||| ||| | ||||| | Sbjct 11968 AGGGTAGCGAAGTTGTCCAACATTTGCTGCTCTAA---------TACAACTTTAGAATGC 11918 Query 9920 GTTTATTGAT--GTAGAATTTTCAGCAGTTGTTGGCCTGTCTGCGGAGCTACTTGCAGGA 9977 || | |||| || || ||||| |||| | | || ||||||| |||| || ||| | Sbjct 11917 GTCTGGTGATTCGTGGAGTTTTCTGCAGCTATCGGTCTGTCTGTACAGCTTTTTCCAGAA 11858 Query 9978 GTGATTTCAGTGCTGGTGCTATCATTTATTCTCTCAACAGGTGCTCTGTCTGTAGACAAC 10037 |||||| ||| || | | ||| |||| |||| ||||||| |||| ||||| | Sbjct 11857 GTGATTCCAGGGCCGTAAAAGTTATTCGTTCTTTCAATAGGTGCTTCATCTGCAGACATC 11798 Query 10038 TCGTGGTCTAAAATTCCTTC---ATCCGTAACTGTATCGGAATCTGAAGTTACCGCATAA 10094 || || ||| | ||| |||| ||| ||| |||||||||||||| || || ||| | Sbjct 11797 TCATGATCTGAGATTACTTCATGATCGGTACTAATATCGGAATCTGAATTTGCCCCATGA 11738 Query 10095 TGTGGTGACACAG---GTTTTACGACGCACTCGCCTGTTTGACGCGTATTGTCTATTACG 10151 || | |||| || || | | | ||||| ||||||| ||||||||| ||| || Sbjct 11737 TGCGCTGACGGAGTTTCTTCTTCCATCCACTCATCTGTTTGCAACGTATTGTCAATTTCG 11678 Score = 408 bits (452), Expect = 4e-110 Identities = 657/939 (70%), Gaps = 32/939 (3%) Strand=Plus/Minus Query 11343 TTGGAAGCAGCAGCAGTTTCTTGTGTCTGAGTGAGTTTCG-TTGATCGGTTGTCTTGAAT 11401 |||||| || || |||| || ||||| || || |||| ||| | ||||| | || Sbjct 10714 TTGGAATCACTAGTAGTTGTTTCTGTCTCAGC-AGATTCGATTGGTTGGTTGCCCTGTGC 10656 Query 11402 GTTGGTCGATTGTTCCCTTATTGA---------CTCTGTATTAGCGTCGGTAACAGAATC 11452 | |||| |||||| | |||| ||||| |||||||||||||||| | | Sbjct 10655 GAAAATCGACTGTTCCTGTCTTGAAGATCCAGGCTCTGCATTAGCGTCGGTAACAAGAGC 10596 Query 11453 GCTAGATGGCTTAGCAGCTTTCTTCAGTTTAAACCGTTTTCCATCAAGTTGTTCGTTCAG 11512 |||||||| || |||||| | |||||| | || || ||||||||||||| |||| | Sbjct 10595 GCTAGATGACTGAGCAGCGTCACCCAGTTTCATTCGCTTCCCATCAAGTTGTTTGTTCGG 10536 Query 11513 TTCTGGTAAACTTGGTCGCGTGATTAATGTTCTCGGCAGTGGTTTCCGAGGATTATCATT 11572 || |||| |||||| | ||| || ||| |||||||||||||||||||| ||||| Sbjct 10535 TTTTGGT------GGTCGCTTAATTGATATTCCTGGCAGTGGTTTCCGAGGATTCTCATT 10482 Query 11573 AAATTTCGACGAGTTACCTTGAGTGGAATTCCGCGAATTCAGGTTCGGCGCAGATTCTGG 11632 |||||||||| | | | ||| | ||| | ||| ||| || | | ||| Sbjct 10481 TGATTTCGACGAATGGTTTCGGTTGGCAACACGCAATTTCTTGTTTAACGGGAAGTTTGG 10422 Query 11633 TTGCGTATCTATAAATAAAAATTTTTATTACTATTCAGAAG-CTTGAAATTTAAAACAAG 11691 || | |||| |||| |||| || |||| |||| || | ||| |||||| ||| ||| Sbjct 10421 TTCTGAATCTGGAAATGAAAAGATTGATTATTATTTCGAGGGCTTTAAATTTGAAATAAG 10362 Query 11692 CAATATTCAAAAAAGTATTTTCAATGGAAATTCAATCGTGAAGACTGATAAATTTATTTG 11751 ||| |||| |||| ||||||||||| |||| | |||||| ||||| | ||| Sbjct 10361 TTGTATCTGAAAATAAATTTACAATGGAAATTAAATCTTTAAGACTAATAAAGTGATTCA 10302 Query 11752 ATTCTTACCAGGCATTTTTCTTGTTTCTCTTTCTACTAAAAGTCGATGATCATTTCTTGA 11811 ||||| ||| | || || || |||| |||||||||| ||| || ||||||||| | Sbjct 10301 ATTCTCACCTG---TTGTTTTTAATTCTTCTTCTACTAAAGGTCCATAATCATTTCTCGT 10245 Query 11812 CGCTGTCCAAGCTTCTGCATTTTGGTAACTATCTGAAAAGANNNNNNNNNNATTCTTATT 11871 ||| ||||| ||||||| | ||||||||||||||| | | | ||||| Sbjct 10244 CGCAATCCAATATTCTGCACCTCTGTAACTATCTGAAAAAAATAAAAA---AATATTATT 10188 Query 11872 TTATCTTAATTTCTGAGA-TATTGTGAATCTGATCATACTTTAGCGATAAAACACAA--- 11927 || ||| |||||||||| ||| | || || ||||| | ||| || ||| Sbjct 10187 TTCTCTCAATTTCTGAGCCTATCTAGGTTCAAAT-ATACTGCGACAATACTACGCAAAAC 10129 Query 11928 CGAATTGATTAATGAAATTATTTAAACTCACTTGAGTGATATTTGACGGCAGCCATAAAA 11987 | ||| | |||| | | ||| |||||||||||| | |||||| ||| ||||||| || Sbjct 10128 CAAATCAACTAATACATTGATTCAAACTCACTTGATTCATATTTAACGATAGCCATATAA 10069 Query 11988 AATTTCCACTCATGATCGCATTTTTCCTTTCTTTTAACGCGATCTCTTGTGAGGGAAGGA 12047 | |||||| | || | | | ||||||||||||||||||||||| ||| | ||||| Sbjct 10068 CAGCTCCACTTGTCATTGTGTCTCTCCTTTCTTTTAACGCGATCTCTGGTGTTGAAAGGA 10009 Query 12048 TCTTCGCCTGTAGGGTAGGTAACAACAGCTTTCATATCGTGTACTTTATGTACCATTACC 12107 |||||| || ||||||| | ||| | || ||| ||| ||||| |||| || | | Sbjct 10008 TCTTCGTCTTTAGGGTACGCAACGATGGCCTTCTGATCCGTCGCTTTACGTACTATCAGC 9949 Query 12108 CAAGTGTGTGGTACGCATACGTAATCATCAATACCTTCATAAGGCAAGTCCAAGAATTGA 12167 |||| || ||||||||||| ||||||||||||||| ||||||| || | ||| ||| Sbjct 9948 CAAGCCGACGGCACGCATACGTAGTCATCAATACCTTCAAAAGGCAATTCTATGAACTGA 9889 Query 12168 ACAACATAGAATGCCGGCTTA---TCACTTTTACGTGTCATATGAAACGATCCAAAACAT 12224 || || | || || || || | | | | |||| |||| |||||| | |||| | Sbjct 9888 ACGACGGAAAACGCTCGCCTATAGTTATTATGACGTTTCATCTGAAACAAATAAAAATAC 9829 Query 12225 TTCCGCTAATGCTAAGTAAAACGATATTATCAAAACAAC 12263 || || ||| | ||||||| |||||| ||||| |||| Sbjct 9828 TTTCGTAAATTCAAAGTAAATCGATATGGTCAAAGCAAC 9790 Score = 111 bits (122), Expect = 2e-20 Identities = 158/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 10323 AGAACAGATGACTGCACTTTCTTTT-TGACCTCTTGAAGAGTAGGCATTTGCGTTTCTTT 10381 |||| || |||| || ||||||| |||| ||||||| |||| |||| |||| Sbjct 11554 AGAATAGGTGACAGCG-TTTCTTTCGTGAC---TTGAAGAATAGGTGCTTGCCGG-CTTT 11500 Query 10382 TTGTAGTTCGTTCGAGACGCTAGTACGTATATCCGGTATCTGCGGTTGTCGCTGTGAGTC 10441 | | | |||| |||| |||| || ||| | |||| | || ||||| || |||||||| Sbjct 11499 TGG--GCTCGTCAGAGATGCTAATATATATTTTCGGTTTTTGTGGTTGCCGTTGTGAGTC 11442 Query 10442 TTGCTGATTCGACTGTGACGGTCTCTGTTGTGGAAATTTGGAAGTCTGATACAACGGATT 10501 ||||||| | ||| ||| ||||||||||||||| ||||| |||||||||||||| | Sbjct 11441 TTGCTGAGATGGCTGCGACTGTCTCTGTTGTGGAAGCTTGGAGATCTGATACAACGGACT 11382 Query 10502 GGATGGTTTCGTTAAAATTTGTCCAGTAGATGGAATA 10538 ||| || | || ||||||| | |||||| || Sbjct 11381 GGAAGGGACAATAGAATTTTGTCCGATGGATGGAGTA 11345 >seq216 Length=395888 Score = 661 bits (732), Expect = 0.0 Identities = 649/834 (78%), Gaps = 14/834 (2%) Strand=Plus/Plus Query 9068 TTCTTAGCATGAATAATTTAGGAACATTGAACGGCTCCACATATGACCAACAGATCGTAA 9127 |||||||| | | ||||| || ||||| | | ||| || ||||| ||| || | || Sbjct 117269 TTCTTAGCTTCAGTAATT-AGAAACATAGGATAACTCGACTTATGATCAAAAGTT---AA 117324 Query 9128 TTATAGTAAGTGGCATTGAACCACGACACCGTATTTGAATCGAATCTCTTGAATCTTACT 9187 | ||||| | |||| ||||| ||||| |||||||| ||||||||||| ||||| || Sbjct 117325 TAATAGTTAA---CATTCAACCATTACACCATATTTGAACCGAATCTCTTGCATCTTGCT 117381 Query 9188 GTGCAAAGTATTGAGAATAGGTTGTATGTCAGTATTCCAACCACGTTGGAGTCCGTGCTC 9247 ||| || ||| |||| |||||||||| |||||||||||||||||||||||||| || || Sbjct 117382 GTGTAAGGTACTGAGGATAGGTTGTAGATCAGTATTCCAACCACGTTGGAGTCCATGTTC 117441 Query 9248 TAAAACAAAATTTAACAGTACTGTACACGCATGATCATCTAATTCTGGCCTAGCATTAGA 9307 ||||||||||||||||||||| | |||||||||||||||||| |||||||| ||||| Sbjct 117442 TAAAACAAAATTTAACAGTACCGAACACGCATGATCATCTAAATCTGGCCTTATGTTAGA 117501 Query 9308 TCCAACATTATCAGAAGCCTGCGCTCTCTCAGTAATTGATAAACAAACACTCAGTGCTTT 9367 || | ||||| | ||||| | || ||||| | |||||| ||||||||||| |||| || Sbjct 117502 GCCGAGATTATTAAAAGCCAGTACTTTCTCACTCATTGATGAACAAACACTCGGTGCATT 117561 Query 9368 TCTGTTGAATACTGCTAATAATAATCGTCGTGCTAATGATTTGCAATCTTTTGATACTTG 9427 ||||||||| ||| | ||||||||||||| |||||| || |||||||||| |||||||| Sbjct 117562 TCTGTTGAAGACTTGTGATAATAATCGTCGAGCTAATAATATGCAATCTTTCGATACTTG 117621 Query 9428 CTGACAGTATTTGAGGTCTCCGTAGCTGACCCAAACACCCCTTTGAGGCCTAAGTTCTAT 9487 |||||||| |||||||||||| ||||||| ||||||| || || ||| ||||||||| Sbjct 117622 CTGACAGTGATTGAGGTCTCCGCAGCTGACGTAAACACCACTCTGGGGCATAAGTTCTAC 117681 Query 9488 GAGACCTGGCAGATTAGTCCGATACTTCAATGTCCATTTTGTATCATGAGGATCATATTC 9547 | | || ||||| || || |||||||||||||||||| ||||||||| || ||||||||| Sbjct 117682 GTGTCCGGGCAGTTTTGTTCGATACTTCAATGTCCATCTTGTATCATAAGCATCATATTC 117741 Query 9548 CGGTGGTAGGACAAA-----ACGCCATGAGTTGTATTTTTTCTTCGGTGGTTCGTTAGCA 9602 ||| ||||| || || || | || ||||||||||| | || || ||| | Sbjct 117742 CGGAGGTAGAACGAACCGGTACAACTTGTTGTGTATTTTTTCCTTCGT--TTTGTTGATA 117799 Query 9603 TCGTCGTTACTATGTTGATCTTGAGTAATGGAACTAGTACTTGCTGTTACTTCAGTGTGT 9662 | || |||||||||||||||||| || | ||||||| || |||||| | || |||| Sbjct 117800 ACATCATTACTATGTTGATCTTGATTACTAGAACTAGCACCCGCTGTTGTCTTAGCGTGT 117859 Query 9663 CTTCTTTTAGGAGACTTTCGGACTTCTGGTTTCGAGTTAATCGAAAAAGATTTATTGTCG 9722 ||| || ||||||| | | |||||||| || | || ||| | |||| ||| Sbjct 117860 CTTTCTTCAGGAGACCGTGGACCTTCTGGTCTCAAATTTATCAAGGGAGATGCCTTGCTA 117919 Query 9723 GCTGAATTTTGCGTTGAGTTGAATTGTTCGACTGCACCTAGTAACTTTTTATATGTCTGG 9782 |||| ||| | | || |||||||||| |||| | ||||||||| ||||||| Sbjct 117920 GCTGCGTTTCTTGATCTATTAAATTGTTCGAAGTCACCCAATAACTTTTTGTATGTCTCA 117979 Query 9783 GCAGTGTCAAGGATTGAACTTCGTAAGGTGCTGTACATATCAGTAGTATAACGCAAAGTA 9842 ||||| || ||| |||||| ||||||||| ||||||||||||| |||||||||||| | Sbjct 117980 GCAGTATCGAGGTATGAACTCCGTAAGGTGTTGTACATATCAGTCGTATAACGCAAATGA 118039 Query 9843 GAGCTTATTTGAGTGAAGAGGTCAGCAAAGTTGTTCAATATTCCCTGCTCTAAA 9896 || | |||||||||||||| || |||| |||| ||| ||| ||||||||| Sbjct 118040 GACCCCGTTTGAGTGAAGAGGGCACCAAAATTGTCCAACATTTGTTGCTCTAAA 118093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48614567249305