Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq184 1658 0.0 seq196 185 1e-42 seq616 181 2e-41 seq354 176 7e-40 seq1 120 5e-23 seq222 95.1 2e-15 >seq184 Length=337772 Score = 1658 bits (1838), Expect = 0.0 Identities = 1328/1598 (83%), Gaps = 53/1598 (3%) Strand=Plus/Minus Query 5510 AACACTTTTCTCGTTGAGTCGAGTCATTCGAGTTCATTCGCACCCACTTGCTACGTCATG 5569 ||||||| | |||||| |||| |||||| ||||| | || | |||||| ||| || |||| Sbjct 130553 AACACTTATGTCGTTGGGTCGCGTCATTTGAGTTTACTCACGCCCACTCGCTTCGACATG 130494 Query 5570 CCCTTTGAATGCCGCACAGTAAATACCGCAAGCAACCGCCATTTTGTCAATTCAGTTTGG 5629 ||| ||||||| || |||||| || ||||||| ||||| || ||||||||||| Sbjct 130493 TT-TTTAAATGCCGT-CA--AAATACTGCCAGCAACC---ATTTTATCTATTCAGTTTGG 130441 Query 5630 AATCGAGCGTTATACGATCAAGAAGTCCCCAAAGTCTCATCCTCATTAAAAATGGTTGAT 5689 || |||||||| ||| || ||||||| | || || |||||||| |||||||||||| Sbjct 130440 AACCGAGCGTTGAACGCTCGGGAAGTCCACGAAAACTGGTCCTCATTGAAAATGGTTGAT 130381 Query 5690 TATTTTATTTACGCAGAAGATTGTTCGGATTCGATAAATAGAGCCGAGTATTACCACAGC 5749 || | |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 130380 TACTATATTTACGCAAAAGATTGTTCGGATTCGATAAATAAAGCCGAGTATTACTACAGC 130321 Query 5750 AACAACTTGAAGACTCTTGAACAATTCAAATGTGACGTCGAAAGCATCAAAGAACAATCA 5809 ||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 130320 AACCACTTGAAGACTCTTGAACAATTCAAATATGACGTCGAAAGGATCAAAGAACAATCG 130261 Query 5810 GTTGCCCAAGAGCCTACAAGACAATTTAAAATTGTTTATTTGAACTGGAGCGACGTCTGT 5869 || ||| ||| ||||||||||||||||| | |||||| ||||||||||||||||| Sbjct 130260 AATGATCAACTGCCGACAAGACAATTTAAAATCCTATATTTGCACTGGAGCGACGTCTGT 130201 Query 5870 TGGGAGGTCAATGAAGATAAGGTTGGAATGAATAATTATACAAATGGCGACGTGACTGGA 5929 ||||||||||||||| ||||||||| | |||| ||| |||||| || ||||| ||||| Sbjct 130200 TGGGAGGTCAATGAAAATAAGGTTGAACTGAAGAATCATACAAGTGATAACGTGTCTGGA 130141 Query 5930 TTATCAAACGTCCATACTTGTGAACGGAGAGATCCAAGATGCCTTATACGGTACTTTCGA 5989 |||||||||||| || | |||||||| |||||||| |||| || |||||| || ||||| Sbjct 130140 TTATCAAACGTCTGTATTAGTGAACGGCGAGATCCAGGATGTCTCATACGGCACCTTCGA 130081 Query 5990 AAAAACTATATTGTTTGTGAAAATGATCGAATCAAATTACTGTACATCGTCACAAATGGC 6049 |||||||||| | ||| |||||||||||||||||||||||| ||||||||||||| ||| Sbjct 130080 AAAAACTATACTATTTTTGAAAATGATCGAATCAAATTACTACACATCGTCACAAACGGC 130021 Query 6050 AAGATTAGCCGGGAAAGTATAGACGAATGTTTGGAATTGAATAAAGAAATAGATTATGAA 6109 | ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct 130020 ATGATTAGCCGGGAAAGAATAGACGAATGTTTAGAATTGAATAAAGACATAGATTATGAA 129961 Query 6110 ATGGTTGTTTTCCATGCATTCAATGAAGACCCGGAAAAAATCGACCTTTTAGTAGCTGCA 6169 | ||||||| |||| || ||| | |||||| |||||||||||||||||| |||||| ||| Sbjct 129960 ACGGTTGTTCTCCACGCGTTCGAAGAAGACTCGGAAAAAATCGACCTTTCAGTAGCAGCA 129901 Query 6170 CCTTTCTTCAAGAGCCGTTGCATCGTTTATCACAATACCGAACTTTGTAACCGTACTCAT 6229 |||||||||||| |||||||| |||||||| |||||| |||||||| || | ||| || Sbjct 129900 CCTTTCTTCAAGGGCCGTTGCTTCGTTTATTACAATAATGAACTTTGCGACAGCACTGAT 129841 Query 6230 ATTTCCAAGGAGTTTGATTATGACAAGATCAGTAGCGACAACTTCGCAGTTGAAATGCAA 6289 |||||||||||||| ||||| ||||| || | || |||||||| ||||||||||||||| Sbjct 129840 ATTTCCAAGGAGTTCGATTACGACAAAATTAACAGTGACAACTTTGCAGTTGAAATGCAA 129781 Query 6290 CAACTTATGTCTTATATTAAATTGAAGTTCATCAATAAATTCAAACGAGACGCTGATGTT 6349 || || |||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 129780 CAGCTCGGGTCTTATATTAAGTTGAAATTCATCAATAAATTCAAACGAGACGCTGATGTT 129721 Query 6350 TGGCGAGAAATTGAAAAATTGCATAACCTAAGAAATCGAATGCTTAGAGAATTGTCAGAA 6409 |||||||||||||||||| || ||||||||||||||||||||||||||| || |||||| Sbjct 129720 TGGCGAGAAATTGAAAAACTGGTTAACCTAAGAAATCGAATGCTTAGAGAGTTATCAGAA 129661 Query 6410 AACACACCAAAATGTCCATTCTTTGAACGAATGGAAGAAAAGGAAAGAAAAATATTATTG 6469 || || |||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 129660 AATACGCCAAAATGTCCATTCTTTGAACGAATGGAAGAAAAGGAGAGAAAAATATTGATG 129601 Query 6470 CGCACATTTGACGTAAATAAGTTCAAGAATTATATGGCTATGGCATATGTGATGAAGACT 6529 || ||||||||||||||||||| || |||||||| ||||||| ||||||||||||||| Sbjct 129600 CGTACATTTGACGTAAATAAGTATAAAAATTATATTTCTATGGCGTATGTGATGAAGACT 129541 Query 6530 GACGTTGAAAAATATGTTGCAGCTATGGTTAACTACATCAAGAGCAATAAAAAATCCTGC 6589 || | ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| Sbjct 129540 GATGCTGAAAAATATGTTGCAGCTCTGGTTGACTACATCAAGAGCAATAGAAAATCCTGT 129481 Query 6590 TCGCTTGACGTCTTGAAGTTCGATTCGAAAGTCAACGAGTCTGTTGAAGAAAAGCAGATC 6649 |||||| |||||||||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct 129480 TCGCTTCACGTCTTGAAGTTCGACTCGAAAGTCAGCGAGTCTGCTGAAGAAAAGCAGATC 129421 Query 6650 GATGATGCTGATTCTACAGACGATGAAGAAAGTAATTTTTTCCTGATAGTTGATGAAGAA 6709 |||| |||||||| ||||||||||||||| || |||| ||||||| | ||||||||| Sbjct 129420 TATGACGCTGATTCCACAGACGATGAAGAATGTGATTTAGTCCTGATGGATGATGAAGAC 129361 Query 6710 AGTTGTCAAGACAACTGGTCTTGATCTGGATGAAGAATTTCTCGAGTTCTCGAACAGCTC 6769 ||||||| ||||||| ||||| ||| || || ||||||| Sbjct 129360 AGTTGTCTTGACAACTTGTCTTTATCCGG-------------CG---------ACAGCTC 129323 Query 6770 AAAACGTTTGATAAAGAAATATTCTAATACAGCTTCACATTGACAAGCATAAAGACTGAA 6829 ||||||||||| || |||| | || | |||||| ||| |||||||| ||||||||| Sbjct 129322 AAAACGTTTGACAACAAAATCTCAGAACGCTGCTTCAAATTTACAAGCATGAAGACTGAA 129263 Query 6830 AATTGAGTATGCGAATAAATATTATTATAAATTTACCGAAGTTCTTCCTTAAATCCTCAT 6889 | ||| ||| |||||||| | ||| |||||||| | ||||| | | ||||||||||| Sbjct 129262 ACTTGTAGATGAGAATAAATGTCATTTTAAATTTAACAAAGTTTTACTTTAAATCCTCAC 129203 Query 6890 TTTCTGGTATAATCTTTTGAACCCATCAAATCATATCAGAAAATTTTTTCACGTATATA- 6948 | ||| ||| | | | |||| || ||| | || || |||||||| Sbjct 129202 T------CCTAAACTT----AACGACGAAATGAT-GCAGTTAGTTGCTTATCGTATATAC 129154 Query 6949 TCCTCAAAA-TAAATTATATATGATTAACCTATAACCTCGTATTAACATATATTTTCATG 7007 | | |||| ||||||||| ||||||||||||| || ||||||||||||| Sbjct 129153 ACATGAAAATTAAATTATA-----------TATAACCTCGTATCAATATATATTTTCATG 129105 Query 7008 AAAGAATAGAATAAAGACAATTCCGAGAACTATATCGTTTCCCGCAACGATCATTATCAG 7067 ||||||| |||||||||| || ||||| || |||||||| || ||||||||||| |||| Sbjct 129104 AAAGAATGAAATAAAGACATTTACGAGACCTCTATCGTTTTCCACAACGATCATTTTCAG 129045 Query 7068 AATCTTTATCTTAATAATAATTTCCAAGAAATATCTTT 7105 |||||||||||| |||||||||| |||||||||||||| Sbjct 129044 AATCTTTATCTTTATAATAATTTTCAAGAAATATCTTT 129007 Score = 156 bits (172), Expect = 7e-34 Identities = 157/200 (79%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 5230 ATTCACCCTATCATATGTCTTATCTAGAATAAAGGCGAATGACTCTTGACAGGTGGCTCA 5289 |||||||||| ||||||| ||| | || |||| || ||||||| || ||||||||| Sbjct 130870 ATTCACCCTACCATATGTATTAATCGGCATTAAGGT-AACGACTCTTTACTGGTGGCTCA 130812 Query 5290 AGAATTGAGTTTGGAATGATGTCCTATTAACCAAATGTTGCCTACAAGATCGGATTAGAA 5349 |||||| |||||| ||||||||| |||||||| |||||||||| | ||| ||| ||| Sbjct 130811 AGAATTAAGTTTGAAATGATGTCATATTAACCCAATGTTGCCTTTTGGCTCGCATT-GAA 130753 Query 5350 CAGCAATCTTAAAAATGCATTCGGCGTTCA-GTTAAATGATTGTCTTCGTTATAATTGTG 5408 |||| | |||||||| ||| |||||| | ||||||| ||| ||| ||||| ||| Sbjct 130752 TGACAATTTCAAAAATGCGTTCTACGTTCAGGATAAATGACTGTTATCGCAATAATGGTG 130693 Query 5409 ATGTCTGTGACGTCATGATA 5428 | |||||||||| || |||| Sbjct 130692 AAGTCTGTGACGACACGATA 130673 Score = 98.7 bits (108), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 6116 GTTTTCCATGCATTCAATGAAGACCCGGAAAAAATCGACCTTTTAGTAGCTGCAC-CTTT 6174 |||||| ||||||| |||||||||||| ||||| | || |||| ||||||||| | |||| Sbjct 131295 GTTTTCAATGCATTTAATGAAGACCCGAAAAAAGTTGATCTTTCAGTAGCTGCGCGCTTT 131236 Query 6175 CTTCAAGAGCCGTTGCATCGTTTATCACAATACCGAACTTTGTAACCGTACTCATATTTC 6234 | ||||| | || | | ||||||| |||| ||| ||||| || | || ||||||| Sbjct 131235 C-TCAAGGGAAGTAGTTTAGTTTATCGAAATAACGACTTTTGTTACTGCGCTGATATTTC 131177 Query 6235 CAAGGAGTTTGAT 6247 || |||||| || Sbjct 131176 AAAAGAGTTTAAT 131164 >seq196 Length=822064 Score = 185 bits (204), Expect = 1e-42 Identities = 452/679 (67%), Gaps = 41/679 (6%) Strand=Plus/Plus Query 5677 AAAAATGGTTGATTATTTTATTTACGCAGAAGATTGTTCGGATTCGA---TAAATAGAGC 5733 |||||||||| |||| ||||||||||| || | |||| |||| | |||| Sbjct 663788 AAAAATGGTTAATTACTTTATTTACGCGCGGGACTTTTCGTTCTCGACCCTCAATAA--- 663844 Query 5734 CGAGTATTACCACAGCAACAACTTGAAGACTCTTGAACAATTCAAATGTGACGTCGAAAG 5793 | |||||||||||| ||| |||||||||||| || ||||||||| | ||||| || | Sbjct 663845 CAAGTATTACCACACTAACGGCTTGAAGACTCTCGAGCAATTCAAACGGGACGTTGAGAA 663904 Query 5794 CATCAAAGA---ACAATCAGTTGCCCAAGAGCCTACAAGACAATTTAAAATTGTTTATTT 5850 ||||||||| ||||||| |||| ||||||| || ||| ||| || ||||| || Sbjct 663905 CATCAAAGAAGAACAATCACTTGCTGGAGAGCCTCCAGCTGAATCTAAGATCGTTTACTT 663964 Query 5851 GAACTGGAGCGACGTCTGTTGGGAGGTCAATGAAGATAAGGTTGGAATGAATAATTATAC 5910 | ||||| | |||| ||||||||| || ||||||||||| || || Sbjct 663965 GCACTGGGGAGACGACTGTTGGGATGTGGATGAAGATAAGACCAGA------------AC 664012 Query 5911 AAATGGCG-ACGTGACTGGATTATCAAACGTCCATACTTGTGAACGGAGAGATCCAAGA- 5968 | ||| ||| ||||| | || || | || | ||||| || || Sbjct 664013 A----GCGTACG----TGGATCA-GAAGTGTGAACGAATGGGCACGGA-----CCCGGAG 664058 Query 5969 TGCCTTATACGGTACTTTCGAAAAAACTATATTGTTTGTGAAAATGATCGAATCAAATTA 6028 || |||| |||| | ||| || || | | ||||| ||| | ||||| || Sbjct 664059 TGGATTATCAAACACTTGCAAAAGAAGTACGTCCTCCATGAAAGCGATAGGATCAAGTTG 664118 Query 6029 CTGTACATCGTCACAAATGGCAAGATTAGCCGGGAAAGTATAGACGAATGTTTGGAATTG 6088 ||||||||| |||| | || ||| | ||| || || | ||||| |||| Sbjct 664119 CTGTACATCATCACGGACGGATTGATCTGTAAGGAGAGCGCTGAGAAGTGTTTCAAATTT 664178 Query 6089 AATAAAGAAATAGATTATGAAATGGTTGTTTTCCATGCATTCAATGAAGACCCGGAAAAA 6148 || || || | || || | ||| |||||||| || |||||||| | ||| || Sbjct 664179 AACGAATTCATGCAGTACGACAGGGTCGTTTTCCACGCGCTCAATGAACAGACGGCCAAC 664238 Query 6149 ATCGACCTTTTAGTAGCTGCACCTTTCTTCAAGAGCCGTTGCATCGTTTATCACAATACC 6208 |||||| | | ||||| || | |||||||||||||||||||| ||||||| ||| | Sbjct 664239 ATCGACTTCTCGGTAGCCGCTTCGTTCTTCAAGAGCCGTTGCATGGTTTATCGTAATTAC 664298 Query 6209 GAACT--TTGTAACCGTACTCATATTTCCAAGGAGTTTGATTATGACAAGATCAGTAGCG 6266 | || | || | | || ||||||||||||| |||||||| || || ||| || Sbjct 664299 AAGCTCCTAGT--CAGCACGGATATTTCCAAGGAATTTGATTACGATAAAATCGATATAC 664356 Query 6267 ACAACTTCGCAGTTGAAATGCAACAACTTATGTCTTATATTAAATTGAAGTTCATCAATA 6326 |||||||| ||| | | | ||| | | |||| | || | || |||| ||||| Sbjct 664357 ACAACTTCACAGCCAAGAAAGACCAATTGAAGTCTCACATCACGTTAAAGTACATCAGAC 664416 Query 6327 AATTCAAACGAGACGCTGA 6345 | || || ||||| ||||| Sbjct 664417 AGTTTAATCGAGATGCTGA 664435 Score = 179 bits (198), Expect = 6e-41 Identities = 451/679 (66%), Gaps = 41/679 (6%) Strand=Plus/Plus Query 5677 AAAAATGGTTGATTATTTTATTTACGCAGAAGATTGTTCGGATTCGA---TAAATAGAGC 5733 |||||||||| |||| ||||||||||| || | |||| |||| | |||| Sbjct 661792 AAAAATGGTTAATTACTTTATTTACGCGCGGGACTTTTCGTTCTCGACCCTCAATAA--- 661848 Query 5734 CGAGTATTACCACAGCAACAACTTGAAGACTCTTGAACAATTCAAATGTGACGTCGAAAG 5793 | |||||||||||| ||| |||||||||||| || ||||||||| | ||||| || | Sbjct 661849 CAAGTATTACCACACTAACGGCTTGAAGACTCTCGAGCAATTCAAACGGGACGTTGAGAA 661908 Query 5794 CATCAAAGA---ACAATCAGTTGCCCAAGAGCCTACAAGACAATTTAAAATTGTTTATTT 5850 ||||||||| ||||||| |||| ||||||| || ||| ||| || ||||| || Sbjct 661909 CATCAAAGAAGAACAATCACTTGCTGGAGAGCCTCCAGCTGAATCTAAGATCGTTTACTT 661968 Query 5851 GAACTGGAGCGACGTCTGTTGGGAGGTCAATGAAGATAAGGTTGGAATGAATAATTATAC 5910 | ||||| | |||| ||||||||| || ||||||||||| || || Sbjct 661969 GCACTGGGGAGACGACTGTTGGGATGTGGATGAAGATAAGACCAGA------------AC 662016 Query 5911 AAATGGCG-ACGTGACTGGATTATCAAACGTCCATACTTGTGAACGGAGAGATCCAAGA- 5968 | ||| ||| ||||| | || || | || | ||||| || || Sbjct 662017 A----GCGTACG----TGGATCA-GAAGTGTGAACGAATGGGCACGGA-----CCCGGAG 662062 Query 5969 TGCCTTATACGGTACTTTCGAAAAAACTATATTGTTTGTGAAAATGATCGAATCAAATTA 6028 || |||| || | | ||| || || | | ||||| ||| | ||||| || Sbjct 662063 TGGATTATCAAACACCTGCAAAAGAAGTACGTCCTCCATGAAAGCGATAGGATCAAGTTG 662122 Query 6029 CTGTACATCGTCACAAATGGCAAGATTAGCCGGGAAAGTATAGACGAATGTTTGGAATTG 6088 ||||||||| |||| | || ||| | ||| || || | ||||| |||| Sbjct 662123 CTGTACATCATCACGGACGGATTGATCTGTAAGGAGAGCGCTGAGAAGTGTTTCAAATTT 662182 Query 6089 AATAAAGAAATAGATTATGAAATGGTTGTTTTCCATGCATTCAATGAAGACCCGGAAAAA 6148 || || || | || || | ||| |||||||| || |||||||| | ||| || Sbjct 662183 AACGAATTCATGCAGTACGACAGGGTCGTTTTCCACGCGCTCAATGAACAGACGGCCAAC 662242 Query 6149 ATCGACCTTTTAGTAGCTGCACCTTTCTTCAAGAGCCGTTGCATCGTTTATCACAATACC 6208 |||||| | | ||||| || | |||||||||||||||||||| ||||||| ||| | Sbjct 662243 ATCGACTTCTCGGTAGCCGCTTCGTTCTTCAAGAGCCGTTGCATGGTTTATCGTAATTAC 662302 Query 6209 GAACT--TTGTAACCGTACTCATATTTCCAAGGAGTTTGATTATGACAAGATCAGTAGCG 6266 | || | || | | || ||||||||||||| |||||||| || || ||| || Sbjct 662303 AAGCTCCTAGT--CAGCACGGATATTTCCAAGGAATTTGATTACGATAAAATCGATATAC 662360 Query 6267 ACAACTTCGCAGTTGAAATGCAACAACTTATGTCTTATATTAAATTGAAGTTCATCAATA 6326 |||||||| ||| | | | ||| | | |||| | || | || |||| ||||| Sbjct 662361 ACAACTTCACAGCCAAGAAAGACCAATTGAAGTCTCACATCACGTTAAAGTACATCAGAC 662420 Query 6327 AATTCAAACGAGACGCTGA 6345 | || || ||||| ||||| Sbjct 662421 AGTTTAATCGAGATGCTGA 662439 >seq616 Length=16865 Score = 181 bits (200), Expect = 2e-41 Identities = 355/523 (68%), Gaps = 4/523 (1%) Strand=Plus/Minus Query 325 ACCAATTCCGTGTAGAAAGATTTGTCTTGGTCGATAGCAAAATAGGGACGGAACGTCTTT 384 |||| ||| || || ||||| || | || | ||||| || || ||||| || || ||| Sbjct 3198 ACCAGTTCTGTATAAAAAGACTTCTTTTTGGTTATAGCGAAGTAAGGACGAAATGTTTTT 3139 Query 385 TCACAGATATCAAACGTGCCTGTCCCAGCTTCGGATGCCTCCAAGTCACCCTCAAAGTGC 444 |||||||||||| ||| ||| | | |||| | | ||| || | | | Sbjct 3138 GGACAGATATCAAAAGTGTCTGCGCTATCTTCCTCAGTGACGGGGTCGCCGACGTAAAAC 3079 Query 445 ATAAGGTGGACGAAGTCATTCAAATGAACTTTCTCCTCAAGAATATCGTCACGCAAAATT 504 | || || || | || || | ||| || | || || | | ||| |||| || ||| Sbjct 3078 AACAGATGAACATAATCGTTTAGATGGACAGTGTCTTCCACCACATCATCACTCAGCATT 3019 Query 505 CCCTTGTGATTTAACTTTAGGTAATTCAGCTTGTATAGATTAGATGATTTTTCAATTTCA 564 ||||||| ||| |||||||||||||||||||| ||||| | |||| | |||||| Sbjct 3018 TCCTTGTGGTTTGGTTTTAGGTAATTCAGCTTGTACAGATTCTGAGGTTTTACTATTTCA 2959 Query 565 CTGACTAGAAAACCATCTACAGTCTTGAAGATTTTCTCCAACAAATAATAAATTTTCTTT 624 ||||| | ||| || || || | |||| || ||| ||| || ||||| ||||||| | Sbjct 2958 CTGACCATAAACCCGTCCACGATTCTGAATATCTTCGCCAGCAGATAATGGATTTTCTCT 2899 Query 625 CTCCGTTTTTGGAtttttttCAAAGTCATTACGTAACTTAGTAGTTCTTTTCGTTTCTCG 684 || |||||| | ||||| ||||| |||| || | ||| || ||||| |||| || Sbjct 2898 CTGCGTTTTGGTATTTTCTTCAATATCATCACATGACTGAGCAGTTCCCGTCGTCGTTCA 2839 Query 685 ATAGGCTTCAAATCTAGATCATAATTGAACCATGTCAAAATTTCAATCATATAGCGCGCT 744 |||| ||||||||| | ||| ||||| || | |||| ||||| |||||| | | | Sbjct 2838 ATAGCCTTCAAATCCATATCGTAATTAAAGTACTTCAAGATTTCGATCATAGCGTGGGAC 2779 Query 745 ACGC--TATAATACCCTCTTAGCCGTTCCTGCTTGTAGTGTTGAGGATCATTTTTAAAAA 802 || | || || | |||| || | ||| || | | | || || || | || || | Sbjct 2778 ACTCCGTAGAACATCCTC--AGTCTTTCGTGACAGAAATTCTGTGGGTCGTGCTTGAATA 2721 Query 803 TTCCTGAGGACAATTCCACGCAGTACCATAACGCAGTTGGTAG 845 || |||| ||| ||||||||||| ||||| || |||| Sbjct 2720 ACGTCGAAGACAGTTCAACGCAGTACCACAACGCTGTCAGTAG 2678 >seq354 Length=309731 Score = 176 bits (194), Expect = 7e-40 Identities = 425/645 (66%), Gaps = 6/645 (1%) Strand=Plus/Plus Query 94 ACATTGGACGGGAAAAGAGTAACCAAATCCATGTGAAACTTTTTTCTCTTAG--AAATGT 151 || ||||| ||||||| || |||||||| | ||| |||||||| | || |||| | Sbjct 117302 ACGTTGGAAGGGAAAATGGTGACCAAATCTTCGACAAA-TTTTTTCT-TCAGCAAAATAT 117359 Query 152 TGTCGACGTACTTAGGTAAGGTCGGATATTTCTTTGATTCCTTTACACAATCAATGAACA 211 |||| |||| || | ||||| | |||||| || | || |||| |||| | | Sbjct 117360 ACTCGATATACTCGGGGTACGTCGGGAACTTCTTTTGATCTTCCACGCAATTAATGTAAA 117419 Query 212 GTTTGTATAGTGACAAAACTCTGTCGAACTCAAGCGAATTGATAGGTTCAAAAGTAACTT 271 |||| ||||| || || | |||||| || | ||| | | | | || || |||| || Sbjct 117420 GTTTATATAGGGATAAGATTCTGTCAAATTGAAGAGTGTCCGTCAGCTCGAAGGTAATTT 117479 Query 272 TNNNNNNNNNNNNnnnnnnnnNNNTGCTAATGACTACTTTCTTGGTATTCTTTACCAATT 331 | | |||| |||| |||| | | |||| || Sbjct 117480 GGACTTTATTTACGTCGTGGTCGTTCTTGATGATGACTTGTCTGGTTATATCGACCAGTT 117539 Query 332 CCGTGTAGAAAGATTTGT-CTTGGTCGATAGCAAAATAGGGACGGAACGTCTTTTCACAG 390 | || || ||||| || | |||| | ||||| || || ||||| || || ||| |||| Sbjct 117540 CTGTATAAAAAGACTTCTTCTTGCTT-ATAGCGAAGTAAGGACGAAATGTTTTTGGACAG 117598 Query 391 ATATCAAACGTGCCTGTCCCAGCTTCGGATGCCTCCAAGTCACCCTCAAAGTGCATAAGG 450 |||||||| ||| ||| | | |||| | ||| || | | | || || Sbjct 117599 ATATCAAAAGTGTCTGCTCTATCTTCCTCAGTGATAGGGTCGCCGACGTAATACAACAGA 117658 Query 451 TGGACGAAGTCATTCAAATGAACTTTCTCCTCAAGAATATCGTCACGCAAAATTCCCTTG 510 || || | || || | ||| || | | || | | ||| |||| || ||| ||||| Sbjct 117659 TGAACATAATCTTTTAGATGGACAGTGTTTTCCACCACATCATCACTCAGCATTTCCTTG 117718 Query 511 TGATTTAACTTTAGGTAATTCAGCTTGTATAGATTAGATGATTTTTCAATTTCACTGACT 570 || ||| |||||||||||||||||||| ||||| | |||| | ||||||||||| Sbjct 117719 TGGTTTGGTTTTAGGTAATTCAGCTTGTACAGATTCTGAGGTTTTACTATTTCACTGACC 117778 Query 571 AGAAAACCATCTACAGTCTTGAAGATTTTCTCCAACAAATAATAAATTTTCTTTCTCCGT 630 | ||| || || || | |||| || ||| ||| || |||||| ||||||| ||| ||| Sbjct 117779 ATAAACCCGTCCACGATTCTGAATATCTTCGCCAGCAGATAATAGATTTTCTCTCTACGT 117838 Query 631 TTTTGGAtttttttCAAAGTCATTACGTAACTTAGTAGTTCTTTTCGTTTCTCGATAGGC 690 ||| | ||||| ||||| |||| || | ||| || ||||| ||| || |||| | Sbjct 117839 TTTGGTATTTTCTTCAATATCATCACATGACTGAGCAGTTCCCGGCGTCGTTCAATAGCC 117898 Query 691 TTCAAATCTAGATCATAATTGAACCATGTCAAAATTTCAATCATA 735 |||||||| | ||| ||||| || | |||| ||||| |||||| Sbjct 117899 TTCAAATCCATATCGTAATTAAAGTACTTCAAGATTTCGATCATA 117943 >seq1 Length=6243310 Score = 120 bits (132), Expect = 5e-23 Identities = 174/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || ||||||||||| || |||||||| || || || ||||||||||| || | || Sbjct 5810686 CTCCGTGATAACATCCAGGGTATCACCAAACCGGCCATACGTCGTCTGGCACGCAGAGGC 5810745 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||| ||| |||| || || | || ||||||| | | ||| | || | ||| Sbjct 5810746 GGCGTCAAACGTATCTCCGGTCTGATATACGAAGAGACCAGAGGCGTTCTCAAAGTATTC 5810805 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| |||| || || || || ||||||||||| || | ||||| ||| Sbjct 5810806 CTAGAGAACGTCATCCGCGACGCCGTCACGTACACCGAGCACGCGAAGAGGAAGACCGTC 5810865 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || ||||||| |||| || || |||| || || || || | | || ||||| || Sbjct 5810866 ACAGCCATGGACGTCGTGTACGCCCTGAAGCGACAGGGACGCACCCTATACGGTTTCGGC 5810925 Query 16694 AGTTAA 16699 ||||| Sbjct 5810926 GGTTAA 5810931 Score = 120 bits (132), Expect = 5e-23 Identities = 174/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || ||||||||||| || |||||||| || || || ||||||||||| || | || Sbjct 5819072 CTCCGTGATAACATCCAGGGTATCACCAAACCGGCCATACGTCGTCTGGCACGCAGAGGC 5819131 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||| ||| |||| || || | || ||||||| | | ||| | || | ||| Sbjct 5819132 GGCGTCAAACGTATCTCCGGTCTGATATACGAAGAGACCAGAGGCGTTCTCAAAGTATTC 5819191 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| |||| || || || || ||||||||||| || | ||||| ||| Sbjct 5819192 CTAGAGAACGTCATCCGCGACGCCGTCACGTACACCGAGCACGCGAAGAGGAAGACCGTC 5819251 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || ||||||| |||| || || |||| || || || || | | || ||||| || Sbjct 5819252 ACAGCCATGGACGTCGTGTACGCCCTGAAGCGACAGGGACGCACCCTATACGGTTTCGGC 5819311 Query 16694 AGTTAA 16699 ||||| Sbjct 5819312 GGTTAA 5819317 Score = 120 bits (132), Expect = 5e-23 Identities = 174/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || ||||||||||| || |||||||| || || || ||||||||||| || | || Sbjct 5823370 CTCCGTGATAACATCCAGGGTATCACCAAACCGGCCATACGTCGTCTGGCACGCAGAGGC 5823429 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||| ||| |||| || || | || ||||||| | | ||| | || | ||| Sbjct 5823430 GGCGTCAAACGTATCTCCGGTCTGATATACGAAGAGACCAGAGGCGTTCTCAAAGTATTC 5823489 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| |||| || || || || ||||||||||| || | ||||| ||| Sbjct 5823490 CTAGAGAACGTCATCCGCGACGCCGTCACGTACACCGAGCACGCGAAGAGGAAGACCGTC 5823549 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || ||||||| |||| || || |||| || || || || | | || ||||| || Sbjct 5823550 ACAGCCATGGACGTCGTGTACGCCCTGAAGCGACAGGGACGCACCCTATACGGTTTCGGC 5823609 Query 16694 AGTTAA 16699 ||||| Sbjct 5823610 GGTTAA 5823615 >seq222 Length=702318 Score = 95.1 bits (104), Expect = 2e-15 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 ||||||||||||| || || || ||||| || ||| | | |||||||| | || |||| Sbjct 470105 GAGATAACATCCAGGGGATAACGAAGCCGGCGATCAGGAGACTGGCTCGGAGAGGAGGAG 470164 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 ||||| | | || || || |||| || |||| | | || ||||||| ||||| Sbjct 470165 TCAAGAGAATATCGGGTCTGATCTACGAGGAGACAAGAGGAGTGCTGAAGATATTCCTGG 470224 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| ||| || || || ||| || || ||||| || | ||||| |||||| Sbjct 470225 AGAACGTGATCAGAGACGCCGTCACCTACACGGAACACGCCAAGAGGAAGACGGTCACCG 470284 Query 16638 CCATGGA 16644 ||||||| Sbjct 470285 CCATGGA 470291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070267313735