Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017
-06-23] 5,395 sequences; 248,577,651 total letters
Query= NC_006643.1
Length=12903
Score E
Sequences producing significant alignments: (Bits) Value
seq89 96.9 3e-16
>seq89
Length=610674
Score = 96.9 bits (106), Expect = 3e-16
Identities = 61/66 (92%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 5829 TCGGGTTGCGGTCAACCAGTCAGATCGATAACATTCCGAATTATTAAAACTCTAGAAAAT 5888
|||| ||||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||
Sbjct 386020 TCGGCTTGCGATCAACCAGTCAGATCGACAACATGCCGAATTATAAAAACTCTAGAAAAT 385961
Query 5889 TTAAAA 5894
||||||
Sbjct 385960 TTAAAA 385955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41171900971260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |