Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_006643.1 Length=12903 Score E Sequences producing significant alignments: (Bits) Value seq89 96.9 3e-16 >seq89 Length=610674 Score = 96.9 bits (106), Expect = 3e-16 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 5829 TCGGGTTGCGGTCAACCAGTCAGATCGATAACATTCCGAATTATTAAAACTCTAGAAAAT 5888 |||| ||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||| Sbjct 386020 TCGGCTTGCGATCAACCAGTCAGATCGACAACATGCCGAATTATAAAAACTCTAGAAAAT 385961 Query 5889 TTAAAA 5894 |||||| Sbjct 385960 TTAAAA 385955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41171900971260