Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq216 1110 0.0 seq80 975 0.0 seq639 953 0.0 seq3 91.5 2e-14 seq127 86.0 8e-13 seq64 86.0 8e-13 seq179 84.2 3e-12 seq247 82.4 9e-12 seq234 82.4 9e-12 >seq216 Length=395888 Score = 1110 bits (1230), Expect = 0.0 Identities = 749/837 (89%), Gaps = 1/837 (0%) Strand=Plus/Minus Query 10794 ATGGTTCGGCAGATAGACCGACAGCTGCCCAAAACTCTACGTCAACGAACCATCAGACGC 10853 ||||||| ||||||||||||||||||| | |||||| | || || || ||| ||||| Sbjct 118165 ATGGTTCTGCAGATAGACCGACAGCTGTC-AAAACTGTGCGGTAAGGAGCCACAAGACGA 118107 Query 10854 ATCGGAAAATTATTTTAGAGCAGCAAATGTTGGACAACTTTGCTACCCTCTTCACTCAAA 10913 ||| |||| ||||||||||||| |||||||||||||| |||| | ||||||||||||||| Sbjct 118106 ATCCGAAATTTATTTTAGAGCAACAAATGTTGGACAATTTTGGTGCCCTCTTCACTCAAA 118047 Query 10914 TGGGCTCTACTTTGTGTTATACAACTGACATGTACAACACCTTACGGAGTTCAATCCTCG 10973 ||| ||| |||| ||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct 118046 CGGGGTCTCATTTGCGTTATACGACTGATATGTACAACACCTTACGGAGTTCATACCTCG 117987 Query 10974 ATACTGCCAAGACATACAAAAAGTTATTGGGTGCCGTCGAACAATTTAACACAGCGGGAA 11033 ||||||| |||||||||||||||||||||||| | ||||||||||||| | | | ||| Sbjct 117986 ATACTGCTGAGACATACAAAAAGTTATTGGGTGACTTCGAACAATTTAATAGATCAAGAA 117927 Query 11034 ACGCAGCTAGCAACGCATCTCCCTCGATCAACTTGAGACCAGAAAGTCCACGGTCCCCTG 11093 ||||||||||||| |||||||||| ||| || |||||||||||| |||||||||| |||| Sbjct 117926 ACGCAGCTAGCAAGGCATCTCCCTTGATAAATTTGAGACCAGAAGGTCCACGGTCTCCTG 117867 Query 11094 AAGAAAGACACACTAAAGTTACACCAAGTGCTAGTTTTAGTAATCAAGATCAACATAGTA 11153 ||||||||||| |||| ||| | ||||||||| ||||||||||||||||||||||| Sbjct 117866 AAGAAAGACACGCTAAGACAACAGCGGGTGCTAGTTCTAGTAATCAAGATCAACATAGTA 117807 Query 11154 ATGATGTTGCTAACAAAACGCCGaaaaaaaaaCACAACAAGTTGTACCGGTTCGTTCTAC 11213 |||||||| ||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct 117806 ATGATGTTATCAACAAAACGAAGGAAAAAATACACAACAAGTTGTACCGGTTCGTTCTAC 117747 Query 11214 CACCGGAATATGATGCTTATGATACAAGATGGACATTAAAGTATCGATCAAATCTGCCGG 11273 | ||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| | Sbjct 117746 CTCCGGAATATGATGCTTATGATACAAGATGGACATTGAAGTATCGAACAAAACTGCCCG 117687 Query 11274 GACTCGTAGAACTTATGCCCCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACT 11333 ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| Sbjct 117686 GACACGTAGAACTTATGCCCCAGAGTGGTGTTTACGTCAGCTGCGGAGACCTCAATCACT 117627 Query 11334 GTCAGCAAGTATCGAAAGATTGCAAATCATTAGCTCGACGATTATTACCACAAGTCTTTA 11393 |||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| | Sbjct 117626 GTCAGCAAGTATCGAAAGATTGCATATTATTAGCTCGACGATTATTATCACAAGTCTTCA 117567 Query 11394 ACAGAAATGCACTGAGTGTTTGTTCATCAATGAGTGAGAAAGCGCAGGCTTCTAATAATG 11453 |||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||||| Sbjct 117566 ACAGAAATGCACCGAGTGTTTGTTCATCAATGAGTGAGAAAGTACTGGCTTTTAATAATC 117507 Query 11454 TTGGCTCTACTATAAGGCCAGATTTAGATGATCATGCTTGTTCGGTGCTGTTAAATTTTG 11513 | ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 117506 TCGGCTCTAACATAAGGCCAGATTTAGATGATCATGCGTGTTCGGTACTGTTAAATTTTG 117447 Query 11514 TATTACAACATGGGCTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACCT 11573 | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117446 TTTTAGAACATGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACCT 117387 Query 11574 TACACAGTAAGATGCAAGAGATTCGGTTTAAATATGGTGTAATGGTTGAATGTTAAC 11630 ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 117386 TACACAGCAAGATGCAAGAGATTCGGTTCAAATATGGTGTAATGGTTGAATGTTAAC 117330 >seq80 Length=626719 Score = 975 bits (1080), Expect = 0.0 Identities = 843/1039 (81%), Gaps = 13/1039 (1%) Strand=Plus/Plus Query 10594 AAGTCATCTAAACGTCATGGAGAATGCGTGTCAAACAGACGAGTGCATGGTAGACGAAAC 10653 || |||||| | || ||| || ||| ||| ||||||| ||||| ||| ||| ||||| Sbjct 503734 AAATCATCTTAGCGACATTGACAATACGTTGCAAACAGGTGAGTGGATGAAAGAAGAAAC 503793 Query 10654 TCTGTCACCGTATCATGCAGTAACTTCAGATTCCGATGCTGTTACGGATCAGGAAGTAAT 10713 || |||| || |||||| | || ||||||||||||| | ||| ||||| |||||||| Sbjct 503794 TCCGTCAGCGCATCATGGGGCAAATTCAGATTCCGATATTAGTACCGATCATGAAGTAAT 503853 Query 10714 CTCAGATCATGAGATGTCAACAGACGAGGCACCTGCTGAAACAACGAACAATGTCTATGG 10773 |||||||||||||||||| |||| || |||||| ||||| |||||| || | || || Sbjct 503854 CTCAGATCATGAGATGTCTGCAGATGAAGCACCTATTGAAAGAACGAATAACTTTTACGG 503913 Query 10774 CACTGCTAATGA-TCCTGGGCATGGTTCGGCAGATAGACCGACAGCTGCCCAAAACTCTA 10832 | ||| ||| | | |||| | | | |||| ||||||| |||||| ||||||| | Sbjct 503914 CCCTGG-AATCACTTCTGGAAAAAGCTGTACAGACAGACCGATAGCTGCAGAAAACTCCA 503972 Query 10833 CGTCAACGAACCATCAGACGCATCGGAAAATTATTTTAGAGCAGCAAATGTTGGACAACT 10892 || || || ||||||||| ||| || | ||||||||||||||||||||||||| Sbjct 503973 CG------AATCACCAGACGCATTCTAAAGTTGTATTAGAGCAGCAAATGTTGGACAACT 504026 Query 10893 TTGCTACCCTCTTCACTCAAATGGGCTCTACTTTGTGTTATACAACTGACATGTACAACA 10952 | ||||||||||||||||||||||| ||||||||| ||||||| ||||| |||||||||| Sbjct 504027 TCGCTACCCTCTTCACTCAAATGGGGTCTACTTTGCGTTATACTACTGATATGTACAACA 504086 Query 10953 CCTTACGGAGTTCAATCCTCGATACTGCCAAGACATACAAAAAGTTATTGGGTGCCGTCG 11012 ||||||||||||| ||||| || || ||| ||||||| ||||||||| ||||||| |||| Sbjct 504087 CCTTACGGAGTTCGATCCTTGACACCGCCCAGACATATAAAAAGTTACTGGGTGCAGTCG 504146 Query 11013 AACAATTTAACACAGCGGGAAACGCAGCTAGCAACGCATCTCCCTCGATCAACTTGAGAC 11072 ||||||| || || | ||| | ||||| |||| ||||| ||||||| || Sbjct 504147 AACAATTAAATTCAACACAAAATTTAATCAGCAATAAATCTTTTTCGATTAACTTGAAAC 504206 Query 11073 CAGAAAGTCCA-CGGTCCCCTGAAGAAAGACACACTAAAGTTACACCAAGTGCTAGTTTT 11131 ||||| |||| |||| ||| || | ||||||||| |||| ||| ||||| |||||| Sbjct 504207 CAGAA-GTCCGTCGGTTTCCTAAAAAGAGACACACTGAAGTAACAGCAAGTACTAGTTCA 504265 Query 11132 AGTAATCAAGATCAACATAGTAATGATGTTGCTAACAAAACGCCGaaaaaaaaaCACAAC 11191 |||| ||||||| |||||||||||| | ||||||| || | ||||| ||||||| |||| Sbjct 504266 AGTACCCAAGATCGACATAGTAATGACGATGCTAACGAACCACCGAAGAAAAAACGCAAC 504325 Query 11192 AAGTTGTACCGGTTCGTTCTACCACCGGAATATGATGCTTATGATACAAGATGGACATTA 11251 | | || || ||||||||||||||||||||| || ||||||||| ||||||||| Sbjct 504326 TCATGG---CGTTTTGTTCTACCACCGGAATATGATCCTCATGATACAAAATGGACATTG 504382 Query 11252 AAGTATCGATCAAATCTGCCGGGACTCGTAGAACTTATGCCCCAAAGTGGTGTTTACGTC 11311 ||||||||| | |||||||| |||||||||||||| ||||| ||||||| |||||||||| Sbjct 504383 AAGTATCGAACCAATCTGCCAGGACTCGTAGAACTCATGCCTCAAAGTGCTGTTTACGTC 504442 Query 11312 AGCTACGGAGACCTCAAATACTGTCAGCAAGTATCGAAAGATTGCAAATCATTAGCTCGA 11371 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | | Sbjct 504443 AGCTACGGAGACCTCAAATACTGTCAGCAAGTATCAAAAGATTGCAAATCATTAGCACTA 504502 Query 11372 CGATTATTACCACAAGTCTTTAACAGAAATGCACTGAGTGTTTGTTCATCAATGAGTGAG 11431 ||||||||| || ||| || |||||||| |||||||||||||||| |||||| |||| Sbjct 504503 CGATTATTATCAGCAGTGTTCAACAGAAAAGCACTGAGTGTTTGTTTATCAATTGCTGAG 504562 Query 11432 AAAGCGCAGGCTTCTAATAATGTTGGCTCTACTATAAGGCCAGATTTAGATGATCATGCT 11491 | ||||||||||||| |||||||| | |||| | |||||||| |||||||||||||| Sbjct 504563 AGAGCGCAGGCTTCTGATAATGTTCGATCTAATGCGAGGCCAGAATTAGATGATCATGCG 504622 Query 11492 TGTTCGGTGCTGTTAAATTTTGTATTACAACATGGGCTCCAACGTGGTTGGAATACTGAT 11551 | |||| ||||| ||||| || ||| | || || || |||||||||||||||||||| Sbjct 504623 GCTACGGTACTGTTGAATTTCGTTTTAGATCACGGACTACAACGTGGTTGGAATACTGAC 504682 Query 11552 CTACAACCTATCCTCAGTACCTTACACAGTAAGATGCAAGAGATTCGGTTTAAATATGGT 11611 ||| |||||| || ||||| ||||||||||| || |||||||||||||| ||||||||| Sbjct 504683 TTACGACCTATTCTTAGTACTTTACACAGTAAAATTCAAGAGATTCGGTTCAAATATGGT 504742 Query 11612 GTAATGGTTGAATGTTAAC 11630 || ||||||||||||||| Sbjct 504743 GTGGTGGTTGAATGTTAAC 504761 Score = 553 bits (612), Expect = 2e-153 Identities = 677/916 (74%), Gaps = 20/916 (2%) Strand=Plus/Plus Query 8063 TGTTTTCACAATATTAAATTACTTGATGTTTACGGAAGTGTTTTTTATTGTTTCAGATGA 8122 || ||| || |||| | |||||| |||||| |||| ||||| ||||||||||||| Sbjct 501860 TGCTTTGACCATATCGATTTACTTTGAATTTACGAAAGTATTTTTATTTGTTTCAGATGA 501919 Query 8123 CACGTAAAAATGATAATAAGCGAGCATTCTATGTTGTTCAATTCATAGAATTGCCTTTTG 8182 |||| | ||| | ||| |||||| || | || ||||| ||||||||||||||||||| Sbjct 501920 AACGTCATAATAACTATAGGCGAGCGTTTTCCGTCGTTCAGTTCATAGAATTGCCTTTTG 501979 Query 8183 AAAGTATTGACGATTACGTATGCGTGCCGAACACGTGGCTGATAGTACGTAAAGCGACGG 8242 || ||||||| || ||||||||||||||| | ||||||||||||||||||||||||| Sbjct 501980 AAGGTATTGATGACTACGTATGCGTGCCGTCGGCTTGGCTGATAGTACGTAAAGCGACGG 502039 Query 8243 ATGACAAGGTCGTTGTTGCGTACCCTAAAGACGAAGATCCTTTTGATACAAGAGATCGTG 8302 || | |||| | |||||||||||||||||||||||||||||| | || |||||||| | Sbjct 502040 ATCAGAAGGCCACTGTTGCGTACCCTAAAGACGAAGATCCTTTCAACACCAGAGATCGCG 502099 Query 8303 TGAAGAGGAAAGAGAGATACAATGATGAGTGGAGATTTTATCTGGCCTCTATC---AAAT 8359 | | || | |||||| ||||||| ||||||| | |||| ||| ||||| |||| Sbjct 502100 TTTATAGAAGGGAGAGACACAATGACGAGTGGAACTGTTATATGG---CTATCGTTAAAT 502156 Query 8360 ATGAATCAAGTGAGTTTTAGTAAATGTATTAGTT-AATAGATTGTGCGTTATATCATTGA 8418 ||||||||||||||||| | | |||||||||||| | | | || ||||| ||| | | Sbjct 502157 ATGAATCAAGTGAGTTTGAATCAATGTATTAGTTGATTTGGTTTTGCGTAGTATTGTCGC 502216 Query 8419 AGTATATTCAGATTCT-GAACATCTCATAAATTAAAAGATAATAATGTTGATATAttttt 8477 |||||||| || || || |||| ||||| | ||| |||||| || | ||||||| Sbjct 502217 AGTATATT-TGAACCTAGATAGGCTCAGAAATTGAGAGAAAATAATATTTTTTTATTTTT 502275 Query 8478 ttCAGATTCTTACAGTGATGCAGAATTTTGGATCGCTACGAGAAATGATTACGGACCTTT 8537 ||||||| |||| | |||||||||| |||||| || |||||||||||||| |||||||| Sbjct 502276 TTCAGATAGTTACGGAGATGCAGAATATTGGATTGCGACGAGAAATGATTATGGACCTTT 502335 Query 8538 GGTTGAAGAGAAATCAAAACCAACAAGTGAGAATTAAATTATTTCATAAGTGCTCACAGT 8597 || ||||| ||| |||| ||||| ||||||||| ||| | || || ||| || | || Sbjct 502336 AGTAGAAGAAGAATTAAAAACAACAGGTGAGAATTGAATAACTTTATTAGT-CTTAAAGA 502394 Query 8598 TGAATTTTTTACTGTAAATACATTCTTGAATACTACTTATTTTAAATTTCAAGCTTTCCA 8657 | | ||| | ||||||| ||| | |||| |||||||| |||||| |||| || | Sbjct 502395 TTTAATTTCCATTGTAAATTTATTTTCAGATACAACTTATTTCAAATTTAAAGCCCTCGA 502454 Query 8658 AATAATAATAAGAATTTTTAGTTTCAGAATTACCACAAAAGCCTT--CGGTAAACGAAAA 8715 ||||||||| | |||| | || ||| | | || ||| ||| | |||| | || Sbjct 502455 AATAATAATCAATCTTTTCATTTCCAGTTTCAGAACCAAA--CTTCCCATTAAATAAGAA 502512 Query 8716 ATTTTTGAATGCCATTCAAAACCGTATGTCAGAATCCAATGATAATTTCCGGAAACCTCT 8775 ||| ||| | | ||||| | ||| ||| ||||||||| | |||||||| || Sbjct 502513 ATTGCGTGTTGCGAACCGAAACCATTCGTCGAAATTAAATGATAATCTTCGGAAACCACT 502572 Query 8776 ACCGATATTATCAATCAAGCGACCAGGAAAGTCAATATCGAAGAAAGAAATTGAAGAAAA 8835 ||| | ||||||| ||||||||| ||| | |||| ||| || |||| | || Sbjct 502573 ACCAGGAATATCAATTAAGCGACCA------CCAAAACCGAACAAACAACTTGATGGGAA 502626 Query 8836 ACGGTTGAAGCAAGATGAATCTGCTCCGTCATCCAGTGCGGTTGTTAATAACGCCAAAGT 8895 || |||| | | ||| |||||| |||||| || || ||||||| |||| || | Sbjct 502627 GCGAATGAAACTGGGTGACGCTGCTCAGTCATCTAGCGCTGTTGTTACCGACGCTAATGC 502686 Query 8896 AGAGACTAGATCTTCAAAAAGAAAACAGTCGGTTATCATCCTAGATAACCAATCAATGGA 8955 |||| || ||||||||| | |||||||| ||||| | | |||||| |||| || Sbjct 502687 AGAGCCTGGATCTTCAAGACAGGAACAGTCGATTATCGCACGGGTCAACCAACCAATCGA 502746 Query 8956 ATGTTGTCCGACAGAA 8971 || | | ||||||| Sbjct 502747 ATCTGCTGAGACAGAA 502762 Score = 185 bits (204), Expect = 1e-42 Identities = 282/400 (71%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 9888 AACAATATTATGCGCACTCTTATCAAAATCAATATCTACCGACCAATCGAGATAACTTGC 9947 |||||||| | ||| |||||||| ||||||||||||||||| |||||| || || Sbjct 503280 AACAATATCACACGCCGTCTTATCAGAATCAATATCTACCGACTAATCGA---AAGTTTG 503336 Query 9948 AACAAGAACGAGTGCAGGGTTCTTCAGAAAGCAACACTTACGATCATCGACCTACATCTC 10007 |||| | | | | ||| |||| ||||||| ||| || || || ||| |||| Sbjct 503337 GACAAAACTTACTTAGGAAATCTGCAGAGAGCAACAATTATGAACAGCGTCCTCACTCTC 503396 Query 10008 AAACTATCAATATGAGGATTCCATCAATTAGACAAAATTCAATACACTTTTCGAATCCGA 10067 |||||||| ||||| | |||||| || |||||||||| || | ||| | |||| Sbjct 503397 GAACTATCAGAATGAGTACTCCATCCATCGGACAAAATTCTATTGTCCCTTCCAGTCCGT 503456 Query 10068 CGTATCAGACTCCCGAGTTTGCACAACAGAAACAGATGCAGCCAAATCAGTTGGATTCAC 10127 |||||||| || || || ||||||||| || ||||||| |||| || |||| Sbjct 503457 TGTATCAGATCTCCAAGCTTCCACAACAGAGTGAGTCGCAGCCATCTCAGCAAGACTCAC 503516 Query 10128 AGCAGCAACCGCAGAGACCCAAACTACGTATTGGCATCTCCATCAAGCCTAAAAACAGAA 10187 | | |||||| || | ||| ||| || |||| ||||||| | |||| |||| | | Sbjct 503517 AACGGCAACCACAAAAACCGAAAATATATATTAGCATCTCTGACGAGCCCAAAAGCCGGC 503576 Query 10188 AACAAATGCCTTCTCTCCAAGGAGTCACTAAGAAAACGCCACCACCTATTTTGACAAATG 10247 || | ||| ||| |||| |||| || |||||| |||||||| | | ||| | Sbjct 503577 AAGCA---CCTATTCTTCAAG---TCACGAAAGAAACGCTGTCACCTATTCTTAAAAAGG 503630 Query 10248 CTCTGAATTCAATACGGCAAAAACTATCAACTACTCATAA 10287 ||| ||||| |||| ||| | |||||||||||||||| Sbjct 503631 TTCTAAATTCGGTACGACAAGCATTATCAACTACTCATAA 503670 >seq639 Length=14582 Score = 953 bits (1056), Expect = 0.0 Identities = 837/1039 (81%), Gaps = 24/1039 (2%) Strand=Plus/Plus Query 10594 AAGTCATCTAAACGTCATGGAGAATGCGTGTCAAACAGACGAGTGCATGGTAGACGAAAC 10653 || |||||| | || || || ||| ||| |||||||| ||||| |||| ||| ||||| Sbjct 11666 AAATCATCTTAGCGAAATTGACAATACGTTGCAAACAGATGAGTGGATGGAAGAAGAAAC 11725 Query 10654 TCTGTCACCGTATCATGCAGTAACTTCAGATTCCGATGCTGTTACGGATCAGGAAGTAAT 10713 || |||| || |||||| | || ||||||||||||| | ||| ||||| |||||||| Sbjct 11726 TCCGTCAGCGCATCATGGGGCAAATTCAGATTCCGATATTAGTACCGATCATGAAGTAAT 11785 Query 10714 CTCAGATCATGAGATGTCAACAGACGAGGCACCTGCTGAAACAACGAACAATGTCTATGG 10773 |||||||||||||||||| |||| || |||||| ||||| |||||| || | || || Sbjct 11786 CTCAGATCATGAGATGTCTGCAGATGAAGCACCTATTGAAAGAACGAATAACTTTTACGG 11845 Query 10774 CACTGCTAATGA-TCCTGGGCATGGTTCGGCAGATAGACCGACAGCTGCCCAAAACTCTA 10832 | ||| ||| | | |||| | | | |||| ||||||| |||||| ||||||| | Sbjct 11846 CCCTGG-AATCACTTCTGGAAAAAGCTGTACAGACAGACCGATAGCTGCAGAAAACTCCA 11904 Query 10833 CGTCAACGAACCATCAGACGCATCGGAAAATTATTTTAGAGCAGCAAATGTTGGACAACT 10892 || || || ||||||||| ||| || | ||||||||||||||||||||||||| Sbjct 11905 CG------AATCACCAGACGCATTCTAAAGTTGTATTAGAGCAGCAAATGTTGGACAACT 11958 Query 10893 TTGCTACCCTCTTCACTCAAATGGGCTCTACTTTGTGTTATACAACTGACATGTACAACA 10952 | ||||||||||||||||||||||| ||||||||| ||||||| ||||| |||||||||| Sbjct 11959 TCGCTACCCTCTTCACTCAAATGGGGTCTACTTTGCGTTATACTACTGATATGTACAACA 12018 Query 10953 CCTTACGGAGTTCAATCCTCGATACTGCCAAGACATACAAAAAGTTATTGGGTGCCGTCG 11012 ||||||||||||| ||||| || || ||| ||||||| ||||||||| ||||||| |||| Sbjct 12019 CCTTACGGAGTTCGATCCTTGACACCGCCCAGACATATAAAAAGTTACTGGGTGCAGTCG 12078 Query 11013 AACAATTTAACACAGCGGGAAACGCAGCTAGCAACGCATCTCCCTCGATCAACTTGAGAC 11072 ||||||| || || | ||| | ||||| |||| ||||| ||||||| || Sbjct 12079 AACAATTAAATTCAACACAAAATTTAATCAGCAATAAATCTTTTTCGATTAACTTGAAAC 12138 Query 11073 CAGAAAGTCCA-CGGTCCCCTGAAGAAAGACACACTAAAGTTACACCAAGTGCTAGTTTT 11131 ||||| |||| |||| ||| || | ||||||||| |||| ||| ||||| ||| Sbjct 12139 CAGAA-GTCCGTCGGTTTCCTAAAAAGAGACACACTGAAGTAACAGCAAGTACTA----- 12192 Query 11132 AGTAATCAAGATCAACATAGTAATGATGTTGCTAACAAAACGCCGaaaaaaaaaCACAAC 11191 ||||||| |||||||||||| | ||||||| || | ||||| ||||||| |||| Sbjct 12193 ------CAAGATCGACATAGTAATGACGATGCTAACGAACCACCGAAGAAAAAACGCAAC 12246 Query 11192 AAGTTGTACCGGTTCGTTCTACCACCGGAATATGATGCTTATGATACAAGATGGACATTA 11251 | | || || ||||||||||||||||||||| || ||||||||| ||||||||| Sbjct 12247 TCATGG---CGTTTTGTTCTACCACCGGAATATGATCCTCATGATACAAAATGGACATTG 12303 Query 11252 AAGTATCGATCAAATCTGCCGGGACTCGTAGAACTTATGCCCCAAAGTGGTGTTTACGTC 11311 ||||||||| | |||||||| |||||||||||||| ||||| ||||||| |||||||||| Sbjct 12304 AAGTATCGAACCAATCTGCCAGGACTCGTAGAACTCATGCCTCAAAGTGCTGTTTACGTC 12363 Query 11312 AGCTACGGAGACCTCAAATACTGTCAGCAAGTATCGAAAGATTGCAAATCATTAGCTCGA 11371 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | | Sbjct 12364 AGCTACGGAGACCTCAAATACTGTCAGCAAGTATCAAAAGATTGCAAATCATTAGCACTA 12423 Query 11372 CGATTATTACCACAAGTCTTTAACAGAAATGCACTGAGTGTTTGTTCATCAATGAGTGAG 11431 ||||||||| || ||| || |||||||| |||||||||||||||| |||||| |||| Sbjct 12424 CGATTATTATCAGCAGTGTTCAACAGAAAAGCACTGAGTGTTTGTTTATCAATTGCTGAG 12483 Query 11432 AAAGCGCAGGCTTCTAATAATGTTGGCTCTACTATAAGGCCAGATTTAGATGATCATGCT 11491 | ||||||||||||| |||||||| | |||| | |||||||| |||||||||||||| Sbjct 12484 AGAGCGCAGGCTTCTGATAATGTTCGATCTAATGCGAGGCCAGAATTAGATGATCATGCG 12543 Query 11492 TGTTCGGTGCTGTTAAATTTTGTATTACAACATGGGCTCCAACGTGGTTGGAATACTGAT 11551 | |||| ||||| ||||| || ||| | || || || |||||||||||||||||||| Sbjct 12544 GCTACGGTACTGTTGAATTTCGTTTTAGATCACGGACTACAACGTGGTTGGAATACTGAC 12603 Query 11552 CTACAACCTATCCTCAGTACCTTACACAGTAAGATGCAAGAGATTCGGTTTAAATATGGT 11611 ||| |||||| || ||||| ||||||||||| || |||||||||||||| ||||||||| Sbjct 12604 TTACGACCTATTCTTAGTACTTTACACAGTAAAATTCAAGAGATTCGGTTCAAATATGGT 12663 Query 11612 GTAATGGTTGAATGTTAAC 11630 || ||||||||||||||| Sbjct 12664 GTGGTGGTTGAATGTTAAC 12682 Score = 562 bits (622), Expect = 4e-156 Identities = 679/916 (74%), Gaps = 20/916 (2%) Strand=Plus/Plus Query 8063 TGTTTTCACAATATTAAATTACTTGATGTTTACGGAAGTGTTTTTTATTGTTTCAGATGA 8122 || ||| || |||| | |||||| |||||| |||| ||||| ||||||||||||| Sbjct 9792 TGCTTTGACCATATCGATTTACTTTGAATTTACGAAAGTATTTTTATTTGTTTCAGATGA 9851 Query 8123 CACGTAAAAATGATAATAAGCGAGCATTCTATGTTGTTCAATTCATAGAATTGCCTTTTG 8182 |||| | ||| | ||| |||||| || | || ||||| ||||||||||||||||||| Sbjct 9852 AACGTCATAATAACTATAGGCGAGCGTTTTCCGTCGTTCAGTTCATAGAATTGCCTTTTG 9911 Query 8183 AAAGTATTGACGATTACGTATGCGTGCCGAACACGTGGCTGATAGTACGTAAAGCGACGG 8242 || ||||||| || ||||||||||||||| | ||||||||||||||||||||||||| Sbjct 9912 AAGGTATTGATGACTACGTATGCGTGCCGTCGGCTTGGCTGATAGTACGTAAAGCGACGG 9971 Query 8243 ATGACAAGGTCGTTGTTGCGTACCCTAAAGACGAAGATCCTTTTGATACAAGAGATCGTG 8302 || | |||| | | ||||||||||||||||||||||||||||| | || |||||||| | Sbjct 9972 ATCAGAAGGCCATCGTTGCGTACCCTAAAGACGAAGATCCTTTCAACACCAGAGATCGCG 10031 Query 8303 TGAAGAGGAAAGAGAGATACAATGATGAGTGGAGATTTTATCTGGCCTCTATC---AAAT 8359 | || || || |||||| ||||||| ||||||| | |||| ||| ||||| |||| Sbjct 10032 TTAAAAGAAAGGAGAGACACAATGACAAGTGGAGCTGTTATATGG---CTATCGTTAAAT 10088 Query 8360 ATGAATCAAGTGAGTTTTAGTAAATGTATTAGTT-AATAGATTGTGCGTTATATCATTGA 8418 ||||||||||||||||| | | |||||||||||| | | | || ||||| ||| | | Sbjct 10089 ATGAATCAAGTGAGTTTGAATCAATGTATTAGTTGATTTGGTTTTGCGTAGTATTGTCGC 10148 Query 8419 AGTATATTCAGATTCT-GAACATCTCATAAATTAAAAGATAATAATGTTGATATAttttt 8477 |||||||| || || || |||| ||||| | ||| |||||| || | ||||||| Sbjct 10149 AGTATATT-TGAACCTAGATAGGCTCAGAAATTGAGAGAAAATAATATTTTTTTATTTTT 10207 Query 8478 ttCAGATTCTTACAGTGATGCAGAATTTTGGATCGCTACGAGAAATGATTACGGACCTTT 8537 ||||||| |||||| | |||||||| |||||| || |||||||||||||| |||||||| Sbjct 10208 TTCAGATAGTTACAGAGGTGCAGAATATTGGATTGCGACGAGAAATGATTATGGACCTTT 10267 Query 8538 GGTTGAAGAGAAATCAAAACCAACAAGTGAGAATTAAATTATTTCATAAGTGCTCACAGT 8597 || ||||| ||| |||| ||||| ||||||||| ||| | || || ||| || | || Sbjct 10268 AGTAGAAGAAGAATTAAAAACAACAGGTGAGAATTGAATCACTTTATTAGT-CTTAAAGA 10326 Query 8598 TGAATTTTTTACTGTAAATACATTCTTGAATACTACTTATTTTAAATTTCAAGCTTTCCA 8657 | | ||| | ||||||| ||| | |||| |||||||| |||||| |||| || | Sbjct 10327 TTTAATTTCCATTGTAAATTTATTTTCAGATACAACTTATTTCAAATTTAAAGCCCTCGA 10386 Query 8658 AATAATAATAAGAATTTTTAGTTTCAGAATTACCACAAAAGCCTT--CGGTAAACGAAAA 8715 ||||||||| | |||| | || |||| | | || ||| ||| || ||||| | || Sbjct 10387 AATAATAATCAATCTTTTCATTTCCAGATTCAGAACCAAA--CTTCCCGTTAAACAAGAA 10444 Query 8716 ATTTTTGAATGCCATTCAAAACCGTATGTCAGAATCCAATGATAATTTCCGGAAACCTCT 8775 ||| ||||| | ||||| | ||| |||| ||||| ||| |||||||| || Sbjct 10445 ATTGCGTGTTGCCAACCGAAACCATTCGTCGAAATCAAATGAGAATCCTCGGAAACCACT 10504 Query 8776 ACCGATATTATCAATCAAGCGACCAGGAAAGTCAATATCGAAGAAAGAAATTGAAGAAAA 8835 || | ||||||| ||||||||| ||| | |||| ||| || |||| | || Sbjct 10505 GCCAGGAATATCAATTAAGCGACCA------CCAAAACCGAACAAACAACTTGATGGGAA 10558 Query 8836 ACGGTTGAAGCAAGATGAATCTGCTCCGTCATCCAGTGCGGTTGTTAATAACGCCAAAGT 8895 || |||| | | ||| |||||| |||||| || || |||||| |||| || | Sbjct 10559 GCGAATGAAACTGGGTGACGCTGCTCAGTCATCTAGCGCTCTTGTTACCGACGCTAATGC 10618 Query 8896 AGAGACTAGATCTTCAAAAAGAAAACAGTCGGTTATCATCCTAGATAACCAATCAATGGA 8955 |||| || ||||||||| | |||||||| || || | | |||||| |||| || Sbjct 10619 AGAGCCTGGATCTTCAAGACAGGAACAGTCGATTTTCGCACAGGGCAACCAACCAATCGA 10678 Query 8956 ATGTTGTCCGACAGAA 8971 || | | ||||||| Sbjct 10679 ATCTGCTGAGACAGAA 10694 Score = 194 bits (214), Expect = 2e-45 Identities = 284/400 (71%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 9888 AACAATATTATGCGCACTCTTATCAAAATCAATATCTACCGACCAATCGAGATAACTTGC 9947 |||||||| | || |||||||| ||||||||||||||||| |||||| || || Sbjct 11212 AACAATATCACACGTCGTCTTATCAGAATCAATATCTACCGACTAATCGA---AAGTTTG 11268 Query 9948 AACAAGAACGAGTGCAGGGTTCTTCAGAAAGCAACACTTACGATCATCGACCTACATCTC 10007 ||||| | | | | ||| |||| ||||||| ||| || || || ||| |||| Sbjct 11269 AACAAAACTTACTTAGGAAATCTGCAGAGAGCAACAATTATGAACAGCGTCCTCACTCTC 11328 Query 10008 AAACTATCAATATGAGGATTCCATCAATTAGACAAAATTCAATACACTTTTCGAATCCGA 10067 |||||||| ||||| | |||||| || |||||||||| || | ||| | |||| Sbjct 11329 GAACTATCAGAATGAGTACTCCATCCATCGGACAAAATTCTATTGTCCCTTCCAGTCCGT 11388 Query 10068 CGTATCAGACTCCCGAGTTTGCACAACAGAAACAGATGCAGCCAAATCAGTTGGATTCAC 10127 |||||||| || || || ||||||||| |||| ||||||| |||| || |||| Sbjct 11389 TGTATCAGATCTCCAAGCTTCCACAACAGAGACAGTCGCAGCCATCTCAGCAAGACTCAC 11448 Query 10128 AGCAGCAACCGCAGAGACCCAAACTACGTATTGGCATCTCCATCAAGCCTAAAAACAGAA 10187 | | |||||| || | ||| ||| || |||| ||||||| | |||| |||| | | Sbjct 11449 AACGGCAACCACAAAAACCGAAAATATATATTAGCATCTCTGACGAGCCCAAAAGCCGGC 11508 Query 10188 AACAAATGCCTTCTCTCCAAGGAGTCACTAAGAAAACGCCACCACCTATTTTGACAAATG 10247 || | ||| ||| |||| |||| || |||||| |||||||| | | ||| | Sbjct 11509 AAGCA---CCTATTCTTCAAG---TCACGAAAGAAACGCTGTCACCTATTCTTAAAAAGG 11562 Query 10248 CTCTGAATTCAATACGGCAAAAACTATCAACTACTCATAA 10287 ||| ||||| |||| ||| | |||||||||||||||| Sbjct 11563 TTCTAAATTCGGTACGACAAGCATTATCAACTACTCATAA 11602 >seq3 Length=1815429 Score = 91.5 bits (100), Expect = 2e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 458191 GAAAAAAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 458132 >seq127 Length=591228 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| ||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||| Sbjct 210568 GAAAAAAATTTATCGATCGTAAAGCACTGTCTGACGCTTCGCATCATGAGTCGTGCAATA 210627 >seq64 Length=1946208 Score = 86.0 bits (94), Expect = 8e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 ||||| ||||| ||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct 946662 GAAACTAATTTTTCGATCGTAAAGCACTCTCTGATGCTTCGCAGCATGAGTCGTGCAATA 946721 >seq179 Length=350167 Score = 84.2 bits (92), Expect = 3e-12 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 7537 AAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 ||| |||||| |||||||||||||| |||||||||||| ||||| |||||||||||||| Sbjct 232569 AAAAAAATTTTTCGATCGTAAAGCATTCTCTGATGCTTCGCATCATGAGTCGTGCAATA 232511 >seq247 Length=263828 Score = 82.4 bits (90), Expect = 9e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 7536 GAAACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATA 7595 |||| ||| || ||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 109305 GAAAAAAAATTTTCGATCGTAAAGCACTCTCTGATGCTTTGCATCATGAGTGCTGCAATA 109246 >seq234 Length=648534 Score = 82.4 bits (90), Expect = 9e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7538 AACAAATTTATCGATCGTAAAGCACTCTCTGATGCTTTGCATCCTGAGTCGTGCAATAAT 7597 || || ||| |||||||||||||||||||||| |||| ||||| |||||||||||||||| Sbjct 12080 AAAAACTTTTTCGATCGTAAAGCACTCTCTGAAGCTTCGCATCATGAGTCGTGCAATAAT 12139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61192982562740