Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_006655.1 Length=15279 Score E Sequences producing significant alignments: (Bits) Value seq80 1817 0.0 seq639 1810 0.0 seq216 762 0.0 seq137 86.0 6e-13 >seq80 Length=626719 Score = 1817 bits (2014), Expect = 0.0 Identities = 1324/1538 (86%), Gaps = 6/1538 (0%) Strand=Plus/Plus Query 3644 TCAACAACAGTCTCTCACGCAATCTTATCAGAATCAATGTATACCGACTAATGGAAATAA 3703 ||||||||| | || ||||| |||||||||||||||| | ||||||||||| |||| Sbjct 503275 TCAACAACAATATCACACGCCGTCTTATCAGAATCAATATCTACCGACTAATCGAAAG-- 503332 Query 3704 CTTTGAACAAGACCTACTTAGGAAATCTGCAGAGCGTAACAATTACGAACAGCGACCTAA 3763 |||| |||| || |||||||||||||||||||| | |||||||| |||||||| ||| | Sbjct 503333 -TTTGGACAAAACTTACTTAGGAAATCTGCAGAGAGCAACAATTATGAACAGCGTCCTCA 503391 Query 3764 CTCTCGGCCTATCAGAATGAGTACTCCATCTATCGGACAAAATTCAATTATCCCTTCCAG 3823 |||||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||| Sbjct 503392 CTCTCGAACTATCAGAATGAGTACTCCATCCATCGGACAAAATTCTATTGTCCCTTCCAG 503451 Query 3824 TCCGTTGTATCAGACCTCCAAGCTTCCACAACAGAGACAGTCGCACCCATCTCAGCAAGA 3883 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 503452 TCCGTTGTATCAGATCTCCAAGCTTCCACAACAGAGTGAGTCGCAGCCATCTCAGCAAGA 503511 Query 3884 CTCACAACGGCAACCACAGAAACCGAAAATACGTATTGGCACCTCTACCAAGCCACAAAA 3943 |||||||||||||||||| |||||||||||| |||| ||| |||| | |||| ||||| Sbjct 503512 CTCACAACGGCAACCACAAAAACCGAAAATATATATTAGCATCTCTGACGAGCC-CAAAA 503570 Query 3944 CAACCGGCAAACACCTACTTTTCAAGTCACAAAAGAAACGCTGTCACCTATTCTTACGAA 4003 ||||||| |||||| | |||||||||| ||||||||||||||||||||||||| || Sbjct 503571 G--CCGGCAAGCACCTATTCTTCAAGTCACGAAAGAAACGCTGTCACCTATTCTTAAAAA 503628 Query 4004 GGTTCTAAATTCGGTACGACAAGCACTATCAACTACTCATAACCAATATCTTCAGAACGA 4063 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 503629 GGTTCTAAATTCGGTACGACAAGCATTATCAACTACTCATAAACAATATCTTCAGAACGA 503688 Query 4064 GCGGCAATTTCAGGGAAATCATAGTAAACGTGCACCTGTTAATGAAAATCATCTGAGCCA 4123 | |||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | Sbjct 503689 ACAGCAATTTCAGGGAAATCATAGTGAACGTGCACTTGTTAATGAAAATCATCTTAGCGA 503748 Query 4124 AATTGACAATACATTGCAAACAGATGAGTGGATGGAAGAAGAAACTCCGTCAGCGCATTA 4183 ||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| | Sbjct 503749 CATTGACAATACGTTGCAAACAGGTGAGTGGATGAAAGAAGAAACTCCGTCAGCGCATCA 503808 Query 4184 TGGGGCAAATTCAGNNNNNNNNNNNNNNNNNNATCATGAAGTCACTTCAGATCAGGAGAT 4243 |||||||||||||| |||||||||| | |||||||| ||||| Sbjct 503809 TGGGGCAAATTCAGATTCCGATATTAGTACCGATCATGAAGTAATCTCAGATCATGAGAT 503868 Query 4244 GTCTGCAGATGAAGCACCTGTTGAAAGAACGAATAACTTTTACGGCCCTGGAATCAGTTC 4303 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 503869 GTCTGCAGATGAAGCACCTATTGAAAGAACGAATAACTTTTACGGCCCTGGAATCACTTC 503928 Query 4304 TGGAAGTAGCTCTGCAGACAGACCGATAGCTGCACAAAACTCTACGATCCACCAGACGCA 4363 ||||| |||| | |||||||||||||||||||| ||||||| |||| ||||||||||| Sbjct 503929 TGGAAAAAGCTGTACAGACAGACCGATAGCTGCAGAAAACTCCACGAATCACCAGACGCA 503988 Query 4364 TTCTAAAGTTATATTGGAGCAGCAAATGTTAGATAACTTTGCTACACTCTTAACTCAAAT 4423 |||||||||| |||| |||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 503989 TTCTAAAGTTGTATTAGAGCAGCAAATGTTGGACAACTTCGCTACCCTCTTCACTCAAAT 504048 Query 4424 GGGATCTACTTTGCGTTATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGA 4483 ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||| || Sbjct 504049 GGGGTCTACTTTGCGTTATACTACTGATATGTACAACACCTTACGGAGTTCGATCCTTGA 504108 Query 4484 TACTGCCCAAACATATAAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAGTGCAAAA 4543 || ||||| ||||||||||| ||| |||||||||||||| |||| || ||| ||||| Sbjct 504109 CACCGCCCAGACATATAAAAAGTTACTGGGTGCAGTCGAACAATTAAATTCAACACAAAA 504168 Query 4544 ATTAGCCAGCAATTCATCTTCTTCAAGCAACCGAACAGAAGAAGTCTCACAGTTGTCTGA 4603 ||| ||||||| ||||| ||| | ||| | | ||||||| | ||| || | Sbjct 504169 TTTAATCAGCAATAAATCTTTTTCGATTAACTTGAAACCAGAAGTCCGTCGGTTTCCTAA 504228 Query 4604 AGAAAGACACATTGAAGTAGCAGCGAGTACTAGTTCTAGTACTCAGAATCAACATAGTCG 4663 | | ||||||| ||||||| |||| ||||||||||| ||||| || ||| ||||||| Sbjct 504229 AAAGAGACACACTGAAGTAACAGCAAGTACTAGTTCAAGTACCCAAGATCGACATAGTAA 504288 Query 4664 TGGTGATGCTAACAGAACGCCGAAAATAAAATACAACTCATGGCGTCTTGTTCTACCACC 4723 || ||||||||| | | ||||| | |||| ||||||||||||| ||||||||||||| Sbjct 504289 TGACGATGCTAACGAACCACCGAAGAAAAAACGCAACTCATGGCGTTTTGTTCTACCACC 504348 Query 4724 GGAATATGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACAAATCTGCCAGGACT 4783 |||||||||||||| |||||| | ||||||||||||||||||||| |||||||||||||| Sbjct 504349 GGAATATGATCCTCATGATACAAAATGGACATTGAAGTATCGAACCAATCTGCCAGGACT 504408 Query 4784 CGTAGAACTTACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACTGTCA 4843 ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 504409 CGTAGAACTCATGCCTCAAAGTGCTGTTTACGTCAGCTACGGAGACCTCAAATACTGTCA 504468 Query 4844 GCAAGTATCAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAGCAGTATTTAACAG 4903 ||||||||||||||||||| |||||||||| ||||||||||||||||| || ||||| Sbjct 504469 GCAAGTATCAAAAGATTGCAAATCATTAGCACTACGATTATTATCAGCAGTGTTCAACAG 504528 Query 4904 AAAAGCACTAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCACCTGATAATGTTGT 4963 ||||||||| ||||||||||| ||||| |||||| ||||||||| ||||||||||| Sbjct 504529 AAAAGCACTGAGTGTTTGTTTATCAATTGCTGAGAGAGCGCAGGCTTCTGATAATGTTCG 504588 Query 4964 ATCTAATATAAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGTTAAATTTCGTTTT 5023 ||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||| Sbjct 504589 ATCTAATGCGAGGCCAGAATTAGATGATCATGCGGCTACGGTACTGTTGAATTTCGTTTT 504648 Query 5024 AGAGCACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACTTTACA 5083 ||| |||||||| |||||||||||||||||||| ||| |||||| || ||||||||||| Sbjct 504649 AGATCACGGACTACAACGTGGTTGGAATACTGACTTACGACCTATTCTTAGTACTTTACA 504708 Query 5084 TTGTAAGATTCAAGAGATTCGGTTCAAATACGGTGTAGTGGTTCAATGCTAACTATTGTG 5143 |||| ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||| Sbjct 504709 CAGTAAAATTCAAGAGATTCGGTTCAAATATGGTGTGGTGGTTGAATGTTAACTATTGTG 504768 Query 5144 ATTATGACTCATTAGTCATAAGTCAAGTTCTCTTATGT 5181 |||| | | ||| || |||||| |||| ||| |||| Sbjct 504769 ATTACTAATAATTGATCTTAAGTCGAGTTATCTCATGT 504806 Score = 728 bits (806), Expect = 0.0 Identities = 535/623 (86%), Gaps = 6/623 (1%) Strand=Plus/Plus Query 2602 TTATTTTAAATTTCAAGCCTTCCAAATAATAACCAAACTTTTTATTTCCAGATATAGAAA 2661 |||||| |||||| ||||| || ||||||||| ||| ||||| |||||||| | |||| Sbjct 502431 TTATTTCAAATTTAAAGCCCTCGAAATAATAATCAATCTTTTCATTTCCAGTTTCAGAAC 502490 Query 2662 CAGAGTTCTCGTTAAATAAGAAATTGCGTAATGCCAACCGAAACCATTCGTCGAAATTAG 2721 || | ||| | |||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 502491 CAAACTTCCCATTAAATAAGAAATTGCGTGTTGCGAACCGAAACCATTCGTCGAAATTAA 502550 Query 2722 ATGATAATCCTCGGAAACCACTGCCAAAAATATTAATCAAGCGACCATCACTACCAGAAC 2781 ||||||||| |||||||||||| ||| ||||| ||| ||||||||| ||| ||| Sbjct 502551 ATGATAATCTTCGGAAACCACTACCAGGAATATCAATTAAGCGACCA------CCAAAAC 502604 Query 2782 CGAACAAACAACTTAATGAGAAACAGATGAAACTGGATGACGCTGCTCAGTCATCTGGCA 2841 |||||||||||||| ||| ||| | |||||||||| ||||||||||||||||||| || Sbjct 502605 CGAACAAACAACTTGATGGGAAGCGAATGAAACTGGGTGACGCTGCTCAGTCATCTAGCG 502664 Query 2842 CTATTGTTACCGACGCTAATGCAGAGCCTGGATCTTCAAGACAGGAACAATCGATTATAG 2901 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 502665 CTGTTGTTACCGACGCTAATGCAGAGCCTGGATCTTCAAGACAGGAACAGTCGATTATCG 502724 Query 2902 CCCAGGACAACCAAACAATGGAATCTGCTCAGACAGGAACAACTGCTAGTGATTCTAACG 2961 | | || ||||||| |||| ||||||||| |||||| ||||||| |||||||||| |||| Sbjct 502725 CACGGGTCAACCAACCAATCGAATCTGCTGAGACAGAAACAACTACTAGTGATTCCAACG 502784 Query 2962 GTACATTGAGCTCCTCTCAGCGGAAAGATGAAAACCTCCAAGAATCATTACCAATACAAG 3021 |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 502785 GTACATCGAGCTCCTCTCAGCGGAAAGATGAAAACCTTCAAGAATCGTTACCAATACAAG 502844 Query 3022 AGCAACAAGAATTGAGTAGGTCGTACATAAATGTAGCAACACCAGATACACCAACCTTTG 3081 |||||||||| ||||||| | | |||||| ||||||| ||||||||||||||| || ||| Sbjct 502845 AGCAACAAGATTTGAGTACGCCCTACATAGATGTAGCTACACCAGATACACCAGCCCTTG 502904 Query 3082 TTATAGACGACAATGAAGAAGTCCAACCTACCAGTATTGAGGAACAGCAAGTACCTTCTT 3141 | ||||||||| ||||| ||||||| ||||||||||||| | ||||||||||||| ||| Sbjct 502905 TGATAGACGACGATGAAAAAGTCCAGCCTACCAGTATTGTGAAACAGCAAGTACCCTCTA 502964 Query 3142 ATCAAGCTATCTCACAATTTACGAAACAGTCGAAACCCGTCCAACAACCTCGAATTGTGG 3201 |||||||||||||||||||||| |||| || |||| ||| |||||| |||| | Sbjct 502965 ATCAAGCTATCTCACAATTTACAGAACAACCGGAACCGATCCGGGAACCTCAAATTTCAG 503024 Query 3202 CGGCCCCATCAATAGAGATGACT 3224 ||||| ||||||||||||||| Sbjct 503025 TAGCCCCGTCAATAGAGATGACT 503047 Score = 646 bits (716), Expect = 0.0 Identities = 608/769 (79%), Gaps = 26/769 (3%) Strand=Plus/Plus Query 481 ATGGAAACATTTGGAATTTATATATAAAAGACATACAAGCATTAAAGCGGTAAGTTTTAG 540 || |||| ||||||| || ||| || ||| | ||||||| || ||| |||| ||||||| Sbjct 501687 ATAGAAATATTTGGACTTCATACATGAAATAGATACAAGGATCAAAAGGGTATGTTTTAG 501746 Query 541 AACTAATTCTTATCAAGTAATATGCAAATGAGACCATAGAATAATAACAGGAAAACTCGA 600 | |||| || | |||||||| |||||| || | ||| || ||||| | Sbjct 501747 CATAAATTTTTTTGAAGTAATACGCAAAT----CC------TGATACCA----AACTCCA 501792 Query 601 CGCGGCCGGCTTGTGAACGGATGAGGCCCGACAGGGTGATAACTTGCCATAAACTGGCAC 660 |||| | |||| ||||||| ||| || ||| | |||||||| || ||| | | ||| Sbjct 501793 CGCGCCTGGCT-GTGAACGAATGGGGACCGCCCGGGTGATATCTATTTATAGAAT--CAC 501849 Query 661 GTGACTGG--TGCTATGTTGATAATATCGAATAAGTTGGTATTTAAGGACGGGTTTTTAC 718 | |||| |||| |||| ||||||| | | || | ||||| | | | |||||| Sbjct 501850 GCTACTGCGTTGCT---TTGACCATATCGATTTACTTTGAATTTACGAAAGTATTTTTAT 501906 Query 719 GTGTTTCAGATGATTCGTAGAAGGGACAATAATAAGCGAGCATTCTATGTTGTTCAATTC 778 |||||||||||| ||| | | || ||| |||||| || | || ||||| ||| Sbjct 501907 TTGTTTCAGATGAAACGTCATA---ATAACTATAGGCGAGCGTTTTCCGTCGTTCAGTTC 501963 Query 779 CTAGAATTGCCTTTTGAAGGTATTGATGATTACGTATGCGTGCCGTACACTTGGCTGATA 838 |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct 501964 ATAGAATTGCCTTTTGAAGGTATTGATGACTACGTATGCGTGCCGTCGGCTTGGCTGATA 502023 Query 839 GTACGTAAAGCGACGGATCAGAAGTCTATTGTTGCGTACCCTAAAGGGGAAGATCCTTTT 898 |||||||||||||||||||||||| | | ||||||||||||||||| ||||||||||| Sbjct 502024 GTACGTAAAGCGACGGATCAGAAGGCCACTGTTGCGTACCCTAAAGACGAAGATCCTTTC 502083 Query 899 GTCACCAAAGATCGCGTCAAGAACAAGGAGAGATGCAATAACGAGTGGAGATTTTTTATG 958 ||||| ||||||||| | | | ||||||| |||| ||||||||| | || |||| Sbjct 502084 AACACCAGAGATCGCGTTTATAGAAGGGAGAGACACAATGACGAGTGGAACTGTTATATG 502143 Query 959 GCTGCGATCAAATATGAAACAGGTGAGTTTGAATCAATGTATTAGTTAATC-GGTTGTGC 1017 ||| | ||||||||| || ||||||||||||||||||||||||| || |||| ||| Sbjct 502144 GCTATCGTTAAATATGAATCAAGTGAGTTTGAATCAATGTATTAGTTGATTTGGTTTTGC 502203 Query 1018 GTAGTATTGTCGAAGTAAATTCGGATCTAGATCATCTCAGAAATTGAGAGAAAGTAATAt 1077 |||||||||||| |||| ||| | | |||||| |||||||||||||||||| |||||| Sbjct 502204 GTAGTATTGTCGCAGTATATTTGAACCTAGATAGGCTCAGAAATTGAGAGAAAATAATAT 502263 Query 1078 ttttttATNNTTTTCAGATAGTTACGGAGATGCAGAATATTGGATTGCGATGAGAAATGA 1137 |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 502264 TTTTTTATTTTTTTCAGATAGTTACGGAGATGCAGAATATTGGATTGCGACGAGAAATGA 502323 Query 1138 TAATGGACCTTCAGTAGAAAGAGAATTAAAAACAACAGGTGAGAATTAAATCGCTTAAAT 1197 | ||||||||| ||||||| |||||||||||||||||||||||||| ||| ||| | | Sbjct 502324 TTATGGACCTTTAGTAGAAGAAGAATTAAAAACAACAGGTGAGAATTGAATAACTTTATT 502383 Query 1198 AGTTCTAACGATCGAATTTTCATTGTAAATTTATTTTCAGAAACCACTT 1246 ||| ||| ||| ||||| ||||||||||||||||||||| || |||| Sbjct 502384 AGTCTTAAAGATTTAATTTCCATTGTAAATTTATTTTCAGATACAACTT 502432 Score = 84.2 bits (92), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 88 ATCAATATAGCAGCATAGGTTTAGCTCGGTCCTAAAAACAATAGAGCAAATATTACTATT 147 |||||||||| |||| |||||| ||| ||||| |||||||| || || | | ||| | Sbjct 501521 ATCAATATAGTAGCAAAGGTTTGGCTTGGTCCGAAAAACAAGAGCGCGGACAATACCCTC 501580 Query 148 ATACGAATAGTAAGGCTCA-AAGACGGTACCATGAGTTGTTTGTACTTATACTGTGACTA 206 || | | | | | || |||||||| || || ||||||||||||||||||||| Sbjct 501581 GTATGTACTGGATAGATCTGAAGACGGTTACACGAAATGTTTGTACTTATACTGTGACGC 501640 Query 207 AGCGCTCACGT 217 | ||||||||| Sbjct 501641 ACCGCTCACGT 501651 >seq639 Length=14582 Score = 1810 bits (2006), Expect = 0.0 Identities = 1321/1538 (86%), Gaps = 17/1538 (1%) Strand=Plus/Plus Query 3644 TCAACAACAGTCTCTCACGCAATCTTATCAGAATCAATGTATACCGACTAATGGAAATAA 3703 ||||||||| | || |||| |||||||||||||||| | ||||||||||| |||| Sbjct 11207 TCAACAACAATATCACACGTCGTCTTATCAGAATCAATATCTACCGACTAATCGAAAG-- 11264 Query 3704 CTTTGAACAAGACCTACTTAGGAAATCTGCAGAGCGTAACAATTACGAACAGCGACCTAA 3763 ||||||||| || |||||||||||||||||||| | |||||||| |||||||| ||| | Sbjct 11265 -TTTGAACAAAACTTACTTAGGAAATCTGCAGAGAGCAACAATTATGAACAGCGTCCTCA 11323 Query 3764 CTCTCGGCCTATCAGAATGAGTACTCCATCTATCGGACAAAATTCAATTATCCCTTCCAG 3823 |||||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||| Sbjct 11324 CTCTCGAACTATCAGAATGAGTACTCCATCCATCGGACAAAATTCTATTGTCCCTTCCAG 11383 Query 3824 TCCGTTGTATCAGACCTCCAAGCTTCCACAACAGAGACAGTCGCACCCATCTCAGCAAGA 3883 |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 11384 TCCGTTGTATCAGATCTCCAAGCTTCCACAACAGAGACAGTCGCAGCCATCTCAGCAAGA 11443 Query 3884 CTCACAACGGCAACCACAGAAACCGAAAATACGTATTGGCACCTCTACCAAGCCACAAAA 3943 |||||||||||||||||| |||||||||||| |||| ||| |||| | |||| ||||| Sbjct 11444 CTCACAACGGCAACCACAAAAACCGAAAATATATATTAGCATCTCTGACGAGCC-CAAAA 11502 Query 3944 CAACCGGCAAACACCTACTTTTCAAGTCACAAAAGAAACGCTGTCACCTATTCTTACGAA 4003 ||||||| |||||| | |||||||||| ||||||||||||||||||||||||| || Sbjct 11503 G--CCGGCAAGCACCTATTCTTCAAGTCACGAAAGAAACGCTGTCACCTATTCTTAAAAA 11560 Query 4004 GGTTCTAAATTCGGTACGACAAGCACTATCAACTACTCATAACCAATATCTTCAGAACGA 4063 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 11561 GGTTCTAAATTCGGTACGACAAGCATTATCAACTACTCATAACCAATATCTTCAGAACGA 11620 Query 4064 GCGGCAATTTCAGGGAAATCATAGTAAACGTGCACCTGTTAATGAAAATCATCTGAGCCA 4123 | |||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | Sbjct 11621 ACAGCAATTTCAGGGAAATCATAGTGAACGTGCACTTGTTAATGAAAATCATCTTAGCGA 11680 Query 4124 AATTGACAATACATTGCAAACAGATGAGTGGATGGAAGAAGAAACTCCGTCAGCGCATTA 4183 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 11681 AATTGACAATACGTTGCAAACAGATGAGTGGATGGAAGAAGAAACTCCGTCAGCGCATCA 11740 Query 4184 TGGGGCAAATTCAGNNNNNNNNNNNNNNNNNNATCATGAAGTCACTTCAGATCAGGAGAT 4243 |||||||||||||| |||||||||| | |||||||| ||||| Sbjct 11741 TGGGGCAAATTCAGATTCCGATATTAGTACCGATCATGAAGTAATCTCAGATCATGAGAT 11800 Query 4244 GTCTGCAGATGAAGCACCTGTTGAAAGAACGAATAACTTTTACGGCCCTGGAATCAGTTC 4303 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 11801 GTCTGCAGATGAAGCACCTATTGAAAGAACGAATAACTTTTACGGCCCTGGAATCACTTC 11860 Query 4304 TGGAAGTAGCTCTGCAGACAGACCGATAGCTGCACAAAACTCTACGATCCACCAGACGCA 4363 ||||| |||| | |||||||||||||||||||| ||||||| |||| ||||||||||| Sbjct 11861 TGGAAAAAGCTGTACAGACAGACCGATAGCTGCAGAAAACTCCACGAATCACCAGACGCA 11920 Query 4364 TTCTAAAGTTATATTGGAGCAGCAAATGTTAGATAACTTTGCTACACTCTTAACTCAAAT 4423 |||||||||| |||| |||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 11921 TTCTAAAGTTGTATTAGAGCAGCAAATGTTGGACAACTTCGCTACCCTCTTCACTCAAAT 11980 Query 4424 GGGATCTACTTTGCGTTATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGA 4483 ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||| || Sbjct 11981 GGGGTCTACTTTGCGTTATACTACTGATATGTACAACACCTTACGGAGTTCGATCCTTGA 12040 Query 4484 TACTGCCCAAACATATAAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAGTGCAAAA 4543 || ||||| ||||||||||| ||| |||||||||||||| |||| || ||| ||||| Sbjct 12041 CACCGCCCAGACATATAAAAAGTTACTGGGTGCAGTCGAACAATTAAATTCAACACAAAA 12100 Query 4544 ATTAGCCAGCAATTCATCTTCTTCAAGCAACCGAACAGAAGAAGTCTCACAGTTGTCTGA 4603 ||| ||||||| ||||| ||| | ||| | | ||||||| | ||| || | Sbjct 12101 TTTAATCAGCAATAAATCTTTTTCGATTAACTTGAAACCAGAAGTCCGTCGGTTTCCTAA 12160 Query 4604 AGAAAGACACATTGAAGTAGCAGCGAGTACTAGTTCTAGTACTCAGAATCAACATAGTCG 4663 | | ||||||| ||||||| |||| ||||||| || ||| ||||||| Sbjct 12161 AAAGAGACACACTGAAGTAACAGCAAGTACTA-----------CAAGATCGACATAGTAA 12209 Query 4664 TGGTGATGCTAACAGAACGCCGAAAATAAAATACAACTCATGGCGTCTTGTTCTACCACC 4723 || ||||||||| | | ||||| | |||| ||||||||||||| ||||||||||||| Sbjct 12210 TGACGATGCTAACGAACCACCGAAGAAAAAACGCAACTCATGGCGTTTTGTTCTACCACC 12269 Query 4724 GGAATATGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACAAATCTGCCAGGACT 4783 |||||||||||||| |||||| | ||||||||||||||||||||| |||||||||||||| Sbjct 12270 GGAATATGATCCTCATGATACAAAATGGACATTGAAGTATCGAACCAATCTGCCAGGACT 12329 Query 4784 CGTAGAACTTACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACTGTCA 4843 ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 12330 CGTAGAACTCATGCCTCAAAGTGCTGTTTACGTCAGCTACGGAGACCTCAAATACTGTCA 12389 Query 4844 GCAAGTATCAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAGCAGTATTTAACAG 4903 ||||||||||||||||||| |||||||||| ||||||||||||||||| || ||||| Sbjct 12390 GCAAGTATCAAAAGATTGCAAATCATTAGCACTACGATTATTATCAGCAGTGTTCAACAG 12449 Query 4904 AAAAGCACTAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCACCTGATAATGTTGT 4963 ||||||||| ||||||||||| ||||| |||||| ||||||||| ||||||||||| Sbjct 12450 AAAAGCACTGAGTGTTTGTTTATCAATTGCTGAGAGAGCGCAGGCTTCTGATAATGTTCG 12509 Query 4964 ATCTAATATAAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGTTAAATTTCGTTTT 5023 ||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||| Sbjct 12510 ATCTAATGCGAGGCCAGAATTAGATGATCATGCGGCTACGGTACTGTTGAATTTCGTTTT 12569 Query 5024 AGAGCACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACTTTACA 5083 ||| |||||||| |||||||||||||||||||| ||| |||||| || ||||||||||| Sbjct 12570 AGATCACGGACTACAACGTGGTTGGAATACTGACTTACGACCTATTCTTAGTACTTTACA 12629 Query 5084 TTGTAAGATTCAAGAGATTCGGTTCAAATACGGTGTAGTGGTTCAATGCTAACTATTGTG 5143 |||| ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||| Sbjct 12630 CAGTAAAATTCAAGAGATTCGGTTCAAATATGGTGTGGTGGTTGAATGTTAACTATTGTG 12689 Query 5144 ATTATGACTCATTAGTCATAAGTCAAGTTCTCTTATGT 5181 |||| | | ||| || |||||| |||| ||| |||| Sbjct 12690 ATTACTAATAATTGATCTTAAGTCGAGTTATCTCATGT 12727 Score = 839 bits (930), Expect = 0.0 Identities = 581/653 (89%), Gaps = 10/653 (2%) Strand=Plus/Plus Query 14288 ATCTTTGAAATTTAAATGATTTTACAATTCAGAGCTTCTTTTCATACATCAGCAGTAATG 14347 ||||||| |||| ||||||||||||||||||||||||||||| | | | || |||| Sbjct 7788 ATCTTTGCAATTCAAATGATTTTACAATTCAGAGCTTCTTTTAACATACCAACAGTGTGA 7847 Query 14348 CGTTCCAAATGCTCAATTGATTTCAACTCAGAAAAACTATTTTATCGCGTGAGTTTGTCC 14407 ||||||||||| |||||||||||||||||||||| ||||||| | || ||||||||||| Sbjct 7848 CGTTCCAAATGGTCAATTGATTTCAACTCAGAAAT-CTATTTTTTTGCATGAGTTTGTCC 7906 Query 14408 CCAAGATTTGTTAGGCTCAATTTTACTTTTATCTGATCAAATTTCCAGCGGAACTTGAAC 14467 || |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| Sbjct 7907 CCGAGATTTGTTAGGCTTAATCTTACTATTATCTGATCAAATTTCCAGCGGAACTTGAAC 7966 Query 14468 TGTTATGTAAGAGTCAACCATTTTTAAGTTAGTTTTAACATTAACATGCTTGTTCATTTC 14527 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 7967 TGTTATGTAAGAGCCAACCATTTTTAAGTTACTTTTAACATTAACATGCTTGTTCATTTC 8026 Query 14528 TTTTCGTCTACGCATAGATTAATTATCGCAAAATTTTATCGTAAATTCTCAAACTTCATA 14587 ||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct 8027 TTTTCGTCTGCGCATAGATTAATTTTCGCATAAGTTTATCGTAAATTCTCAAACTTCATA 8086 Query 14588 CACAACATGCTGTGTTATTCCCGATGTAACCTTGAACCCTTTAACGTCACCC-TTTTTTG 14646 ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 8087 CACGACATGCTGTGTTATTCTCGATGTAACCTTGAACCCTTTAACGTCACCCTTTTTTTG 8146 Query 14647 CTACCGGAAACTTTAGTACCATAAGAACTTCTAGAACCTAATAAATTTTTATATTCCCTC 14706 ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 8147 CTACCGGAACCTCTAGTACCATAAAAACTTCTAGAACCTAATAAATTTTTATATTCCTTA 8206 Query 14707 GCCCTACATTAAATTATAAGGTTCAAAATAGCAAGTCACTGATGCTCATAGCGAAAAATC 14766 | ||||||||||||||||||||||||||||||||||||| || ||||| |||||| | Sbjct 8207 ACTCTACATTAAATTATAAGGTTCAAAATAGCAAGTCACTTTTGTTCATAACGAAAATCC 8266 Query 14767 CCGAATCATCGTTCATGGAATACGAAATCATATTGCCAACATTTATTATTAGCTATCTCA 14826 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 8267 CCGAATCATCGTTTATGGAATACGAAATCATCTTGCCAACATTTATTATTAGCTATCTCA 8326 Query 14827 TGAATAGTAATAAGGCAAAC---TGGTCT--TATTGAGGTAGCCTACTATATAAGGGCTC 14881 ||||| | |||||||||||| || || ||||| ||||| | ||||||||| || Sbjct 8327 TGAATCGGAATAAGGCAAACCCTTGAGCTAGCCTTGAGTTAGCCCATTATATAAGGATTC 8386 Query 14882 ACAGATGAATTTAATTCATATTAGCATTCTAACAACCGGTCA---TGTTGTTC 14931 ||||||||||| | |||| |||| ||| ||||||| |||| |||||||| Sbjct 8387 ACAGATGAATTCATTTCACATTAATATTTGAACAACCAGTCACCGTGTTGTTC 8439 Score = 758 bits (840), Expect = 0.0 Identities = 872/1164 (75%), Gaps = 46/1164 (4%) Strand=Plus/Plus Query 88 ATCAATATAGCAGCATAGGTTTAGCTCGGTCCTAAAAACAATAGAGCAAATATTACTATT 147 |||||||||| |||| |||||| ||| ||||| |||||||| |||| | ||||| || Sbjct 9242 ATCAATATAGTAGCAAAGGTTTGGCTTGGTCCGAAAAACAAGAGAGAGGACATTACCCTT 9301 Query 148 ATACGAATAGTAAGGCTCA-AAGACGGTACCATGAGTTGTTTGTACTTATACTGTGACTA 206 || | | | | | || |||||||| || || ||||||||||||||||||||| Sbjct 9302 GTATGTACTGGATAGATCTGAAGACGGTTACACGAAATGTTTGTACTTATACTGTGACGC 9361 Query 207 AGCGCTCACGTTTCGGGGATAAGTACAAGGTGGCACGATAACCAATTGTAATCATTACAG 266 | ||||||||| | ||||||| || |||| | | || | | | | || Sbjct 9362 ACCGCTCACGTAAAG---ATAAGTATAA-------CGATGAGCCATAATGACCGGGATAG 9411 Query 267 TATCTTTGAAAGTTGTTTACGCGTCACGCTTCGTGGCCTTCCCCCACTCTCTAGTTTCGG 326 ||| | || || | | ||||| | ||| | |||||||||||| | ||| | Sbjct 9412 AATCATAACAAAACATTAATGAGTCACACAACGTAGATTTCCCCCACTCTTCACTTTAGA 9471 Query 327 GGTCATGGTATTTTATCAAAAACGGCATGCGCACTTGCGCACACCTCATTCAAACTTCTT 386 ||||| |||| ||||| | | ||||||||| || ||||| || Sbjct 9472 GGTCACTATATTCCGTCAAATAGGTCATGCGCACCAGCAGTG------TTCAAGTTTTGG 9525 Query 387 CCTTCAAGTTGATACAACTTATCTCTTTGAAGACTATACGTAAATAAAAAGTAGAAGAAA 446 | | | || || |||||||| || |||| | || || | |||| | ||||| || Sbjct 9526 CTATAGACGTGTAACCACTTATCTATTCGAAG--TTTAAGTGGAAAAAAGGGAGAAGCAA 9583 Query 447 TTGGCTTATTTATTAACAAGGAAAAA-AGATACTGATGGAAACATTTGGAATTTATATAT 505 |||| |||| |||| || | ||| || ||||| ||||||||| ||||||| || ||| || Sbjct 9584 TTGGTTTATCTATTTACGAAGAAGAAGAGATAGTGATGGAAATATTTGGAGTTCATACAT 9643 Query 506 AAAAGACATACAAGCATTAAAGCGGTAAGTTTTAGAACTAATTCTTATCAAGTAATATGC 565 ||| | ||||||| || ||| |||| ||||||| | ||||| || | |||||||| || Sbjct 9644 GAAATAGATACAAGGATCAAAAGGGTATGTTTTAGCATTAATTTTTTTGAAGTAATACGC 9703 Query 566 AAATGAGACCATAGAATAATAACAGGAAAACTCGACGCGGCCGGCTTGTGAACGGATGAG 625 |||| || | ||| || ||||| ||||| | |||| ||||||| ||| | Sbjct 9704 AAAT----CC------TGATACCA----AACTCCACGCGCCTGGCT-GTGAACGAATGGG 9748 Query 626 GCCCGACAGGGTGATAACTTGCCATAAACTGGCACGTGACTGG--TGCTATGTTGATAAT 683 ||||| | |||||||| || || | | |||| |||| |||| |||| || Sbjct 9749 GCCCGCCCGGGTGATATCTATTTATGGAAT--CACGCTACTGCGTTGCT---TTGACCAT 9803 Query 684 ATCGAATAAGTTGGTATTTAAGGACGGGTTTTTACGTGTTTCAGATGATTCGTAGAAGGG 743 ||||| | | || | ||||| | | | |||||| |||||||||||| ||| | Sbjct 9804 ATCGATTTACTTTGAATTTACGAAAGTATTTTTATTTGTTTCAGATGAAACGTCATA--- 9860 Query 744 ACAATAATAAGCGAGCATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTATTG 803 | || ||| |||||| || | || ||||| ||| |||||||||||||||||||||||| Sbjct 9861 ATAACTATAGGCGAGCGTTTTCCGTCGTTCAGTTCATAGAATTGCCTTTTGAAGGTATTG 9920 Query 804 ATGATTACGTATGCGTGCCGTACACTTGGCTGATAGTACGTAAAGCGACGGATCAGAAGT 863 |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 9921 ATGACTACGTATGCGTGCCGTCGGCTTGGCTGATAGTACGTAAAGCGACGGATCAGAAGG 9980 Query 864 CTATTGTTGCGTACCCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAGAACA 923 | || |||||||||||||||| ||||||||||| ||||| ||||||||| || | | Sbjct 9981 CCATCGTTGCGTACCCTAAAGACGAAGATCCTTTCAACACCAGAGATCGCGTTAAAAGAA 10040 Query 924 AGGAGAGATGCAATAACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACAGGTG 983 |||||||| |||| || ||||||| | || ||||||| | ||||||||| || ||| Sbjct 10041 AGGAGAGACACAATGACAAGTGGAGCTGTTATATGGCTATCGTTAAATATGAATCAAGTG 10100 Query 984 AGTTTGAATCAATGTATTAGTTAATC-GGTTGTGCGTAGTATTGTCGAAGTAAATTCGGA 1042 |||||||||||||||||||||| || |||| ||||||||||||||| |||| ||| | | Sbjct 10101 AGTTTGAATCAATGTATTAGTTGATTTGGTTTTGCGTAGTATTGTCGCAGTATATTTGAA 10160 Query 1043 TCTAGATCATCTCAGAAATTGAGAGAAAGTAATAtttttttATNNTTTTCAGATAGTTAC 1102 |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 10161 CCTAGATAGGCTCAGAAATTGAGAGAAAATAATATTTTTTTATTTTTTTCAGATAGTTAC 10220 Query 1103 GGAGATGCAGAATATTGGATTGCGATGAGAAATGATAATGGACCTTCAGTAGAAAGAGAA 1162 ||| |||||||||||||||||||| |||||||||| ||||||||| ||||||| |||| Sbjct 10221 AGAGGTGCAGAATATTGGATTGCGACGAGAAATGATTATGGACCTTTAGTAGAAGAAGAA 10280 Query 1163 TTAAAAACAACAGGTGAGAATTAAATCGCTTAAATAGTTCTAACGATCGAATTTTCATTG 1222 |||||||||||||||||||||| |||| ||| | |||| ||| ||| ||||| ||||| Sbjct 10281 TTAAAAACAACAGGTGAGAATTGAATCACTTTATTAGTCTTAAAGATTTAATTTCCATTG 10340 Query 1223 TAAATTTATTTTCAGAAACCACTT 1246 |||||||||||||||| || |||| Sbjct 10341 TAAATTTATTTTCAGATACAACTT 10364 Score = 728 bits (806), Expect = 0.0 Identities = 535/623 (86%), Gaps = 6/623 (1%) Strand=Plus/Plus Query 2602 TTATTTTAAATTTCAAGCCTTCCAAATAATAACCAAACTTTTTATTTCCAGATATAGAAA 2661 |||||| |||||| ||||| || ||||||||| ||| ||||| |||||||||| |||| Sbjct 10363 TTATTTCAAATTTAAAGCCCTCGAAATAATAATCAATCTTTTCATTTCCAGATTCAGAAC 10422 Query 2662 CAGAGTTCTCGTTAAATAAGAAATTGCGTAATGCCAACCGAAACCATTCGTCGAAATTAG 2721 || | ||| ||||||| |||||||||||| |||||||||||||||||||||||||| | Sbjct 10423 CAAACTTCCCGTTAAACAAGAAATTGCGTGTTGCCAACCGAAACCATTCGTCGAAATCAA 10482 Query 2722 ATGATAATCCTCGGAAACCACTGCCAAAAATATTAATCAAGCGACCATCACTACCAGAAC 2781 |||| ||||||||||||||||||||| ||||| ||| ||||||||| ||| ||| Sbjct 10483 ATGAGAATCCTCGGAAACCACTGCCAGGAATATCAATTAAGCGACCA------CCAAAAC 10536 Query 2782 CGAACAAACAACTTAATGAGAAACAGATGAAACTGGATGACGCTGCTCAGTCATCTGGCA 2841 |||||||||||||| ||| ||| | |||||||||| ||||||||||||||||||| || Sbjct 10537 CGAACAAACAACTTGATGGGAAGCGAATGAAACTGGGTGACGCTGCTCAGTCATCTAGCG 10596 Query 2842 CTATTGTTACCGACGCTAATGCAGAGCCTGGATCTTCAAGACAGGAACAATCGATTATAG 2901 || |||||||||||||||||||||||||||||||||||||||||||||| |||||| | | Sbjct 10597 CTCTTGTTACCGACGCTAATGCAGAGCCTGGATCTTCAAGACAGGAACAGTCGATTTTCG 10656 Query 2902 CCCAGGACAACCAAACAATGGAATCTGCTCAGACAGGAACAACTGCTAGTGATTCTAACG 2961 | |||| ||||||| |||| ||||||||| |||||| ||||||| |||||||||| |||| Sbjct 10657 CACAGGGCAACCAACCAATCGAATCTGCTGAGACAGAAACAACTACTAGTGATTCCAACG 10716 Query 2962 GTACATTGAGCTCCTCTCAGCGGAAAGATGAAAACCTCCAAGAATCATTACCAATACAAG 3021 |||||| |||||| |||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct 10717 GTACATCGAGCTCTTCTCAGCGGAAACATGAAAACCTTCAAGAATCGTTACCAATACAAG 10776 Query 3022 AGCAACAAGAATTGAGTAGGTCGTACATAAATGTAGCAACACCAGATACACCAACCTTTG 3081 |||||||||| ||||||| | | |||||| ||||||| ||||||||||||||| || ||| Sbjct 10777 AGCAACAAGATTTGAGTACGCCCTACATAGATGTAGCTACACCAGATACACCAGCCCTTG 10836 Query 3082 TTATAGACGACAATGAAGAAGTCCAACCTACCAGTATTGAGGAACAGCAAGTACCTTCTT 3141 | ||||||||| ||||| ||||||| |||| |||||||| | ||||||||||||| ||| Sbjct 10837 TGATAGACGACGATGAAAAAGTCCAGCCTAACAGTATTGTGAAACAGCAAGTACCCTCTA 10896 Query 3142 ATCAAGCTATCTCACAATTTACGAAACAGTCGAAACCCGTCCAACAACCTCGAATTGTGG 3201 |||||||||||||||||||||| ||||| || |||| ||| |||||| |||| | Sbjct 10897 ATCAAGCTATCTCACAATTTACAGAACAGCCGGAACCGATCCGGGAACCTCAAATTTCAG 10956 Query 3202 CGGCCCCATCAATAGAGATGACT 3224 ||||| ||||||||||||||| Sbjct 10957 TAGCCCCGTCAATAGAGATGACT 10979 Score = 378 bits (418), Expect = 7e-101 Identities = 379/489 (78%), Gaps = 21/489 (4%) Strand=Plus/Plus Query 8710 AAAATCCGCCCATCATGGATCATTCACG-TCCCTGGCCAACAATGTTTCAGAGAGAAGCA 8768 |||||||| || ||||||||||||||| || |||||||| |||||| ||| Sbjct 6970 AAAATCCGTCCGGCATGGATCATTCACGGTCTATGGCCAACGATGTTTGGAAGACTTCAG 7029 Query 8769 GACCCAATGCCTGGATGTCGGCGATTTGATA-----------tttttttGAATAAGAACC 8817 ||||||||||| |||||||||||| ||||| ||| ||| ||| |||||| Sbjct 7030 GACCCAATGCCCCGATGTCGGCGATATGATAAAGAAATATTATTTCTTTCAATCAGAACC 7089 Query 8818 GATTTGTCGATCATAAAATATTGGGTGCGTTAGATAACACTTGGTACACGATACTTGCTA 8877 ||||||| ||| |||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct 7090 GATTTGTTGATAATAAAATATTGGGTCCGTTAGAAAACACTTGGTACACGGTACTTGCTA 7149 Query 8878 AAGAATGGAGCGAGAATACGAAATTCTGGGAACACGAGTTCAATAAGCATGGAAGCTGTG 8937 ||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7150 AAGGATGGAGTGACAATACGAAATTCTGGGAACACGAGTTCAATAAGCATGGAAGCTGTG 7209 Query 8938 CCACTCGTTCAAGTGTCATTGGAGATGATGTGAACTATTTTAAGAGAACACTCGAGCTAC 8997 || ||||||| ||||| ||||| ||||||||||| |||||||| || |||||||| ||| Sbjct 7210 CCTCTCGTTCGAGTGTTATTGGGGATGATGTGAATTATTTTAAAAGGACACTCGAACTAT 7269 Query 8998 ATCGTCAGCTGAACATTGGCATGACGTTTTCCCTAGG--TGGACTTAAAACTGGTGCTAC 9055 |||||| ||||||||| |||||| | | || ||||| | ||| | || Sbjct 7270 TCAATCAGCTATACATTGGCACGACGTTAT--ATGGGAATGGACATCGTGTTGGAGGCAC 7327 Query 9056 CATCAAATTGCGATATATTATTGATATTATCGaaaaaaaaGTTGGCGCAACGGTCAAAAT 9115 | | | ||| | ||||| |||||||||||||| | | | |||||||||| | || Sbjct 7328 CGTTTACTTGAAAAATATTGTTGATATTATCGAAGATAGAATTGGCGCAACAATTCAATA 7387 Query 9116 TGACTTTGTTCAGAATCCAGTAAGTGTTTACAATACTTTGAC---GTCATCATATTTTCA 9172 | || ||||| |||| |||||| |||| |||||| || | ||||| ||| ||| Sbjct 7388 TAACCTTGTTACGAATGAAGTAAGCATTTAAAATACTCTGGCTCTGTCAT--TATGGTCA 7445 Query 9173 TGGATTTTG 9181 || |||||| Sbjct 7446 TGTATTTTG 7454 Score = 187 bits (206), Expect = 2e-43 Identities = 190/256 (74%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 12467 CTCGATGGTAAGAGttttttttATGACACATTGTTTTTTCGTTCATTTGCAGGTCAGGTC 12526 || ||||| || || ||||| | | |||||||||||||| |||||||||||||| | | Sbjct 6168 CTTGATGGCAAAAGATTTTTCTGTAACACATTGTTTTTTTGTTCATTTGCAGGTTATTTT 6227 Query 12527 CTGGTACTAGAGGAACTAGTTCAGGGCNNNNNNNNNNNNNNNNNNNNNNNNNTACTCAAA 12586 ||||||||||||||||||| |||||| |||||||| Sbjct 6228 TTGGTACTAGAGGAACTAGTCCAGGGCGATCTAATTCTGGTAGAGTAAGTCTTACTCAAA 6287 Query 12587 CCAATGTTAGAGGGAATCAAGTTTCGGGTCCATCGCACCCAAATAGAGCTCCAGTTCAAC 12646 ||||| | |||| ||| ||||| || | ||||||||| |||||||||||||| |||| Sbjct 6288 CCAATTTCGGAGGAAATTCAGTTTGGGATGAATCGCACCCGAATAGAGCTCCAGTCCAAC 6347 Query 12647 CCGCATCAGTTGGGGCTCTACGCTGGTTCAACTCTCAACCTCCTGCTACATTACCTTTGA 12706 || || ||||| | | || || | || ||||| ||||| ||||||||| ||||||| || Sbjct 6348 CCCCACCAGTTAGAGTTCGACCCGGGGTCAACCCTCAATTTCCTGCTACGTTACCTTCGA 6407 Query 12707 ATAGACCTCAAGCTTC 12722 |||| ||||||||||| Sbjct 6408 ATAGTCCTCAAGCTTC 6423 Score = 138 bits (152), Expect = 1e-28 Identities = 168/231 (73%), Gaps = 21/231 (9%) Strand=Plus/Plus Query 13943 TCTGCTATGACACACATCTCAGAGTAATGGACTGCCCAAATGTATATTGGTCCGATGAAA 14002 ||||||||| ||| |||| ||||| |||||||| |||||||| || | |||||| Sbjct 7523 TCTGCTATGGTACAAATCTTAGAGTGATGGACTGTCCAAATGTGCATCGAAACGATGATG 7582 Query 14003 GATTGGAGACAGACATCAGGTATTTGGAAAAGCTACCAAAAATGTAAAACATATTGTTCT 14062 |||| | |||| || |||||| | | |||||| |||||||||| | || || Sbjct 7583 ATTTGGTTTTGAAAATCAAGTGTTTGGATAGCTTGCCAAAATTGTAAAACATTTCGTACT 7642 Query 14063 TTTTGTTTCTTTACGTGTTTTTCGTTCCAAATAAATATGTATAAAATTCTTCATGTGTAA 14122 ||||||||||||| |||||||| |||||||| ||| || | ||||| |||| | Sbjct 7643 TTTTGTTTCTTTATGTGTTTTT-GTTCCAAAGAAAAATATGTAAAA----TCATAT---- 7693 Query 14123 TTATTTTATTCAGTGTAAGCGTTTTCATGTAATAAATTTATTTTTAATTAT 14173 |||||||| |||||||||||||||||||||||||| ||| Sbjct 7694 ------------GTGTAAGCATTTTCATGTAATAAATTTATTTTTAACTAT 7732 Score = 132 bits (146), Expect = 5e-27 Identities = 185/254 (73%), Gaps = 9/254 (4%) Strand=Plus/Plus Query 13586 AACCCGTTGGTCTAAAAACTCCTGGAAGTACTGCAATTATGGAGTCAGCTGCG--CACCC 13643 ||||| |||||| || || | |||||| || ||| | |||| ||| | | | Sbjct 6770 AACCCATTGGTCCGAATGTTCTTAAAAGTACAGCCGTTACGACGTCAAGAGCGAGCTCAC 6829 Query 13644 AAGTAAGTGTGTGGACAAGACTGAAACGACACCAAAGACTATTGCGCCTGCCGAGCACTG 13703 || | |||||||||||| || | ||||| |||||||||||||| |||||| ||||| Sbjct 6830 AATT--GTGTGTGGACAACACAGCAACGATGCCAAAGACTATTGCATGTGCCGAACACTG 6887 Query 13704 CTTTGACTATTTTAAGTTTGCTGTAGCTTGGAATCCAGGTATGGCGTACAAGCTATGGCT 13763 |||||||| || || | |||||||||||| ||||||| || |||||| |||| Sbjct 6888 TTTTGACTACTTCAAAATAGCTGTAGCTTGGTCTCCAGGTTACGCTTACAAGGAATGGAA 6947 Query 13764 CACACG-CTACAAGATTCGTACCGATAGAATTCACCAGTCATGAATCATTCACGGTCTAT 13822 | | ||||||| | |||| | | ||| | | | |||| |||||||||||||||| Sbjct 6948 GAAGGGCCTACAAG-TACGTA---ACAAAATCCGTCCGGCATGGATCATTCACGGTCTAT 7003 Query 13823 GGCCAACAATGTTT 13836 ||||||| |||||| Sbjct 7004 GGCCAACGATGTTT 7017 >seq216 Length=395888 Score = 762 bits (844), Expect = 0.0 Identities = 728/922 (79%), Gaps = 26/922 (3%) Strand=Plus/Minus Query 4314 TCTGCAGACAGACCGATAGCTGCACAAAACTCTACGAT------CCACCAGACGCATTCT 4367 |||||||| ||||||| ||||| ||||||| | || | |||| ||||| || | Sbjct 118160 TCTGCAGATAGACCGACAGCTGT-CAAAACTGTGCGGTAAGGAGCCACAAGACGAATCCG 118102 Query 4368 AAAGTTATATTGGAGCAGCAAATGTTAGATAACTTTGCTACACTCTTAACTCAAATGGGA 4427 ||| |||| || ||||| |||||||| || || |||| | | ||||| ||||||| ||| Sbjct 118101 AAATTTATTTTAGAGCAACAAATGTTGGACAATTTTGGTGCCCTCTTCACTCAAACGGGG 118042 Query 4428 TCTACTTTGCGTTATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGATACT 4487 ||| |||||||||||| |||||||||||||||||| |||| |||||| |||||||||| Sbjct 118041 TCTCATTTGCGTTATACGACTGATATGTACAACACCTTACGGAGTTCATACCTCGATACT 117982 Query 4488 GCCCAAACATATAAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAGTGCAAAAATT- 4546 || | ||||| ||||| |||||||||| ||||| |||| || || ||| || Sbjct 117981 GCTGAGACATACAAAAAGTTATTGGGTGACTTCGAACAATTTAAT--AGATCAAGAAACG 117924 Query 4547 -AGCCAGCAATTCATCTTCTTCAAGCAACC---GAACAGAAGAAGTCTCACAGTTGTCTG 4602 ||| ||||| ||||| | | | || || |||||| ||| ||| || ||| Sbjct 117923 CAGCTAGCAAGGCATCTCCCTTGATAAATTTGAGACCAGAAG--GTC-CACGGTCTCCTG 117867 Query 4603 AAGAAAGACACATTGAAGTAGCAGCGAGTACTAGTTCTAGTACTCAGAATCAACATAGTC 4662 ||||||||||| | | | ||||| || |||||||||||| ||| ||||||||||| Sbjct 117866 AAGAAAGACACGCTAAGACAACAGCGGGTGCTAGTTCTAGTAATCAAGATCAACATAGTA 117807 Query 4663 GTGGTGATGCTAACAGAACGCCGAAAATAAAATACAACTCATGG---CGTCTTGTTCTAC 4719 || || | |||| |||| | ||| || | ||||| | | || | ||||||| Sbjct 117806 ATGATGTTATCAACAAAACGAAGGAAAAAATACACAACAAGTTGTACCGGTTCGTTCTAC 117747 Query 4720 CACCGGAATATGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACAAATCTGCCAG 4779 | |||||||||||| || |||||| |||||||||||||||||||||||||| ||||| | Sbjct 117746 CTCCGGAATATGATGCTTATGATACAAGATGGACATTGAAGTATCGAACAAAACTGCCCG 117687 Query 4780 GACTCGTAGAACTTACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACT 4839 ||| ||||||||||| ||| || ||||||||||||||||||| |||||||||||| ||| Sbjct 117686 GACACGTAGAACTTATGCCCCAGAGTGGTGTTTACGTCAGCTGCGGAGACCTCAATCACT 117627 Query 4840 GTCAGCAAGTATCAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAGCAGTATTTA 4899 ||||||||||||| ||||||||| || |||||| |||||||||||| ||| || | Sbjct 117626 GTCAGCAAGTATCGAAAGATTGCATATTATTAGCTCGACGATTATTATCACAAGTCTTCA 117567 Query 4900 ACAGAAAAGCACTAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCACCTGATAATG 4959 ||||||| |||| |||||||||| ||||||| |||||||| | ||| | ||||| Sbjct 117566 ACAGAAATGCACCGAGTGTTTGTTCATCAATGAGTGAGAAAGTACTGGCTTTTAATAATC 117507 Query 4960 TTGTATCTAATATAAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGTTAAATTTCG 5019 | | ||||| ||||||||||| ||||||||| |||||||| |||||||||||||||| | Sbjct 117506 TCGGCTCTAACATAAGGCCAGATTTAGATGATCATGCGTGTTCGGTACTGTTAAATTTTG 117447 Query 5020 TTTTAGAGCACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACTT 5079 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 117446 TTTTAGAACATGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACCT 117387 Query 5080 TACATTGTAAGATTCAAGAGATTCGGTTCAAATACGGTGTAGTGGTTCAATGCTAACTAT 5139 |||| | ||||| |||||||||||||||||||| |||||| ||||| |||| ||||||| Sbjct 117386 TACACAGCAAGATGCAAGAGATTCGGTTCAAATATGGTGTAATGGTTGAATGTTAACTAT 117327 Query 5140 TGTGATTATGACTCATTAGTCATAAGTCAAGTTCTCTTATGTTTTCAATTACTGAGGCTG 5199 | |||| ||| || ||||||||| |||| || ||||||| ||||||||| ||| Sbjct 117326 T---ATTA--ACT-TTTGATCATAAGTCGAGTTATCCTATGTTTCTAATTACTGAAGCTA 117273 Query 5200 AAAATCTTGCCATCTATTTATT 5221 | || |||||||| ||||||| Sbjct 117272 AGAACCTTGCCATTGATTTATT 117251 >seq137 Length=487914 Score = 86.0 bits (94), Expect = 6e-13 Identities = 116/161 (72%), Gaps = 17/161 (11%) Strand=Plus/Plus Query 6472 AATTTTAATAACAGAACCGATTGATAATAGAAAATAAAATTCAGTCATGTTGCTAAAATA 6531 ||||||| || ||||||| ||| ||||| |||||||||| | ||||||| || |||| Sbjct 444001 AATTTTATTAGCAGAACCAATTAATAATGGAAAATAAAAGTAAGTCATGCTGTCGTAATA 444060 Query 6532 TGTGAATTTTAAGGATTACTCAGTAGGTATC---ACACAGTTTGTTTGCAATTACATATG 6588 | |||||||| ||| |||||| |||| ||| || | ||||||| ||| Sbjct 444061 T------TTTAAGGAAGTCTC----GGTATCGCTACACGCTTTATTCGTAATTACAAATG 444110 Query 6589 ATACGGAGGACATGTGTAGAGGATAAATGAAAACTTTCAAC 6629 |||| | || ||||| | |||||||||||||| ||| Sbjct 444111 ATACTAAACACTTGTGT----GCTAAATGAAAACTTTTAAC 444147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48771357468170