Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq149 89.7 5e-13 >seq149 Length=636072 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| ||| || | ||||||| || || ||||||||||| | |||||||| | Sbjct 239461 CTTCATCTCTAGAAATGAGTTCATTACTGAAAGTCAAACCGGGCATGAGACCTCTCTTCT 239402 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 | | ||| || || || ||||| || || |||||||| || ||||| |||||||||| Sbjct 239401 TCATCCAGAAGATAGAAGCAAAACTACCAGAGAAGAAAATCCCTTCAACAGCAGCAAATG 239342 Query 21618 CAACTAATCGTTCACCGTATGT 21639 |||| | || || || |||| Sbjct 239341 CAACAATGCGCTCTCCAAATGT 239320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531864929939800