Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq219 91.5 4e-13 >seq219 Length=603346 Score = 91.5 bits (100), Expect = 4e-13 Identities = 351/549 (64%), Gaps = 2/549 (0%) Strand=Plus/Minus Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819 || ||||| || ||||| ||| | | |||| | | || || || || || || || || Sbjct 378589 TCAAATGGACTCGTTCCGATGTTGAGGGTGTATAATAACACAGCAAGATATGTTGATCAA 378530 Query 363820 GGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATT 363879 || || || || || || || || || ||| | ||||| ||| | ||||| Sbjct 378529 GGGGGCAATAAACGTCCGGGAGCATTCGCCATCTATGTGGAGCCGTGGCATTCTGATATC 378470 Query 363880 TTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTG 363939 || |||||| | || | ||| ||||| ||||| || ||| || | || | || || Sbjct 378469 TTCGAGTTTTTGGATTTAAAGAAGAACACAGGAAAGGAAGAAGTGAGGGCCAGAGAATTG 378410 Query 363940 TTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGG 363999 || ||||| || ||| | | || || |||||| | || ||| | | | |||||| Sbjct 378409 TTTTATGCTCTATGGATACCAGATTTGTTCATGAAGAGGGTTGAGAGAAATGAAAATTGG 378350 Query 364000 TCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTT 364059 || | || || || | |||||||| |||| ||| | ||||| || | || Sbjct 378349 AGTCTGATGTGTCCCCATAACTGTCCAGGGCTTTATGATTGTTACGGTGAAGAATTTGAA 378290 Query 364060 GCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCC-CGCACAGAA 364118 || | || || || |||||| || | || | || || ||| | | ||| |||| Sbjct 378289 GCGTTGTATGAGAAATATGAACAAGAAA-ACAGATTTGTCAGGCAAGTACGCGCTCAGAT 378231 Query 364119 GCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAA 364178 ||||| ||||| || || |||| | || || || || || || ||| ||||||| Sbjct 378230 ATTATGGAAAGCCATTATTGAAGCGCAAGTCGAAACTGGTACTCCATACATGCTGTACAA 378171 Query 364179 AGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCT 364238 |||| | || ||| | || || || | | ||||| || || | || || | Sbjct 378170 AGATGCATGTAACAGAAAAAGTAATCAAAAAAATCTTGGAACTATCAAATGCAGTAATTT 378111 Query 364239 ATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 ||||| || ||| ||||||| || | || ||| |||||| || || || || || Sbjct 378110 GTGTACTGAAATTGTTGAATATACATCGGAAGATGAGGTTGCCGTGTGCAATCTCGCCTC 378051 Query 364299 GATCGCGCT 364307 || || || Sbjct 378050 AATAGCTCT 378042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303263507718890