Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq445 293 2e-74 seq131 156 4e-33 seq219 152 4e-32 seq64 118 9e-22 seq149 87.8 2e-12 >seq445 Length=79264 Score = 293 bits (324), Expect = 2e-74 Identities = 770/1155 (67%), Gaps = 29/1155 (3%) Strand=Plus/Minus Query 55653 AAAGGCGGTCGATATATAATGACCGTAAAGCTATGCAACTCGGACGGATGCACTTCGAGT 55712 ||||| || |||||| ||||| | | || || ||||| || || |||| || ||| Sbjct 27887 AAAGGAGGCCGATATCAAATGAAAATTGAACTCTGTAACTCTGATGGTTGCAGTTACAGT 27828 Query 55713 CAAGCGGTCGAAGTTGTAATCGCAGATACGGACGGTTCTCATCTTGCTCCGCTCTATTAC 55772 || | || ||||||| || || || ||||| ||||||| | ||| | | || Sbjct 27827 GAACCTACTGAGATTGTAATTGCTGACACCGACGGAAGTCATCTTCCACCGTTAGAATAT 27768 Query 55773 GAATATCAG-GAATTAAATCAACCTTTCGAAACGCGAGTCGTGGATAAAATCGTTGCCGC 55831 | || | ||| || |||| ||| |||| ||| ||| |||| |||||| || Sbjct 27767 TCA-ATGGGAGAAAAGAACAAACCATTC-AAACAAACGTC-TGG-TAAAGTCGTTGGAGC 27712 Query 55832 ATATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTGTCACTCGAGTTCCCACTCC 55891 || || || || |||||||| || | || || || || ||| ||| || || | ||| Sbjct 27711 TTACTTCGTTGAATGGGGTGTATACCCCAGGAAATTCCCCGTCGATCGTGTGCCGATTCC 27652 Query 55892 TAATCTGTCACACATTCTCTACGGATTCATACCGATATGCGGCGGCGACGGCATTAACGA 55951 ||||| |||| |||| ||||| |||||||||||||| || || || |||||||| || Sbjct 27651 AAATCTCACACATCTTCTTTACGGTTTCATACCGATATGTGGGGGTGATGGCATTAATGA 27592 Query 55952 CAGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGCGATCGTGTTCGGGTCGAGA 56011 |||| | || || || |||||| |||| || ||||| || || ||||| || Sbjct 27591 CAGTTTAAAAGAAATCGAGGGAAGTTTTCAAGCACTACAGCGTTCATGCAGTGGTCGGGA 27532 Query 56012 CGACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCCAAAAGCCCCAAAAACAAGT 56071 || || || || || || ||||| || |||||||| | || || || |||| | | Sbjct 27531 AGATTTTAAGGTTTCCATCCATGATCCTTGGGCTGCTTTACAGAAACCTCAAAGAGGTCT 27472 Query 56072 GACCGCATGGAACGAACCATACAAAGGCAACTTTGGACAATTGATGGCAGCTAAACTGGC 56131 || | ||||| ||||| || |||||||| ||||| ||||||||| || |||| || Sbjct 27471 ATCCTCCTGGAATGAACCTTATAAAGGCAATTTTGGTCAATTGATGTCATTGAAACAAGC 27412 Query 56132 GAATCCCCATGTTAAAGTGCTGCCTTCGATCGGTGGCTGGACTTTATCCGATCCGTTCTT 56191 || || | | || | | || || || ||||| ||||||||| | ||||| ||||| Sbjct 27411 TAAACCAGACTTGAAGATTTTACCATCAATTGGTGGGTGGACTTTAGCTGATCCTTTCTT 27352 Query 56192 TTACTTTCAC-GATGCGGTCAAACGCAAAATTTTTGTCGATTCTGTCGTCGAGT---TTT 56247 | | ||||| ||| | || || | ||||| || ||||| || | ||| Sbjct 27351 CTTC-TTCACTGATAAGAGTAAGCGACAGCGATTTGTAGAATCTGTTAAAGATTTCCTTT 27293 Query 56248 TACAGACCTGGAAATTTTTCGATGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAAGG 56307 || ||||||||||| || || ||||| || || ||||||||||| || || || || | Sbjct 27292 TA---ACCTGGAAATTCTTTGACGGTGTTGATATTGACTGGGAGTTCCCTGGTGGTAAAG 27236 Query 56308 GGGCCAATTCCAACGTCGGCGATGCC--GAACGCGATCGCAACACGTACACGATTCTGTT 56365 | || || | || ||| || ||| ||| ||| | ||| | | || | Sbjct 27235 GTGCTAACCCAGACCTCG--GAAGCCCAGAA---GATGGTGCTGTTTACGTTAGTTTGAT 27181 Query 56366 ACGAGATTTACGCGAAGCGCTAGACCGACTAAGCCTCGA-AACGAATCGAACATACGAGC 56424 ||| ||||| ||| ||| || || | | | | | || | ||| ||||| | Sbjct 27180 GGAAGAATTACGTGAAATGCTTGA-TGATTTATCTGCTACCACTGGTAAAACGTACGAAC 27122 Query 56425 TAACCAGCGCCATTAGCGCCGGCGATGACAAAATCACGGTCGTCGACTACACAGCCGCTC 56484 | ||| || || || || || |||||||| ||| ||||| ||| || || | Sbjct 27121 TGACCTCAGCAATCAGTGCTGGATGGGACAAAATTCAGGTTGTCGATTACGCAAAAGCGC 27062 Query 56485 AAAAATATTTAGATTATAtttttttGATGACATACGATTTTAAAGGCGCTTGGTCGAATA 56544 || |||| | || | ||||| | |||| |||||||| ||||| || ||||| ||| Sbjct 27061 AACAATACATGGACCACATTTTCGTTATGAGTTACGATTTCAAAGGAGCATGGTCAAATG 27002 Query 56545 GCGATCTGGGCTATCAGACGACTTTGTACGCGCCTGCGTTTAATCCTAAAGAACACTATA 56604 | |||| |||| || | ||||| || || || | ||||||||||| || | Sbjct 27001 ATACTTTGGGACATCAAACTCCGTTGTATGCACCGGCATGGAATCCTAAAGAGACTTACA 26942 Query 56605 CGACCGATTTTGCGGTTCGTGCTCTGCTTAAACAAAAAGT-CGAGA-ATAAAAAGATTGT 56662 | ||||| || |||| | | | | | | || || | | |||||||| || Sbjct 26941 CAACCGACTT--CGGTGTGAAATATTTGTTAGCTCAAGGTGTGTCACCGAAAAAGATCGT 26884 Query 56663 AGTCGGCGTAGCTATGTACGGTCGCGGGTGGACCGGCGTCGGTGATTTCGTCGACAAAAA 56722 ||| || || |||||||| ||||| || ||||| || || || || ||| ||| Sbjct 26883 AGTTGGTGTTGCTATGTATGGTCGAGGATGGACTGGGGTTAATGGTT---ACGAGGGAAA 26827 Query 56723 CAATCCATTTTCCGGCACGGCCAAGGGACCTGTCAAAGGTACCTGGGAAGACGGAGTCGT 56782 |||||||| | |||| || | ||||| |||||||| || ||| ||||||| || | Sbjct 26826 TAATCCATTCACAGGCAATGCTACTGGACCAGTCAAAGGAACATGGCAAGACGGTGTTAT 26767 Query 56783 TGATTTTAGAGAAAT 56797 ||||| ||||||||| Sbjct 26766 TGATTATAGAGAAAT 26752 >seq131 Length=856804 Score = 156 bits (172), Expect = 4e-33 Identities = 176/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||||||||||||||||||| |||| || | ||||| || || | Sbjct 308111 ATGCAAATCTTTGTAAAAACATTAACTGGAAAAACGATCACTTTGGAAGTTGAACCCTCC 308052 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || ||| ||||| ||||| ||||| || || || || || Sbjct 308051 GACACGATCGAGAATGTTAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 307992 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||||| || | | ||||||||| | ||||||| | | | | ||||||||| Sbjct 307991 CAGAGACTTATCTTTGCCGGCAAGCAGTTAGAAGATGGACGCACCCTGTCTGATTATAAC 307932 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATG 24226 |||||||| ||||| || | || ||||| |||||||| |||| ||| | ||||| Sbjct 307931 ATTCAAAAGGAATCAACCCTGCACTTAGTACTAAGATTGCGAGGGGGAGTCTAATG 307876 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||||||||||||||||||| |||| || | ||||| || || | Sbjct 308339 ATGCAAATCTTTGTAAAAACATTAACTGGAAAAACGATCACTTTGGAAGTTGAACCCTCC 308280 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || ||| ||||| ||||| ||||| || || || || || Sbjct 308279 GACACGATCGAGAATGTTAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 308220 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||||| || | | ||||||||| | ||||||| | | | | ||||| ||| Sbjct 308219 CAGAGACTTATCTTTGCCGGCAAGCAGTTAGAAGATGGACGCACCCTGTCTGATTACAAC 308160 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || | || || || |||||||||||||||| Sbjct 308159 ATTCAAAAGGAATCAACCCTGCACTTGGTACTAAGATTGAGAGGAGG 308113 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||||||||||||||||||| |||| || | ||||| || || | Sbjct 308567 ATGCAAATCTTTGTAAAAACATTAACTGGAAAAACGATCACTTTGGAAGTTGAACCCTCC 308508 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || ||| ||||| ||||| ||||| || || || || || Sbjct 308507 GACACGATCGAGAATGTTAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 308448 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||||| || | | ||||||||| | ||||||| | | | | ||||| ||| Sbjct 308447 CAGAGACTTATCTTTGCCGGCAAGCAGTTAGAAGATGGACGCACCCTGTCTGATTACAAC 308388 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || | || || || |||||||||||||||| Sbjct 308387 ATTCAAAAGGAATCAACCCTGCACTTGGTACTAAGATTGAGAGGAGG 308341 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||||||||||||||||||| |||| || | ||||| || || | Sbjct 308795 ATGCAAATCTTTGTAAAAACATTAACTGGAAAAACGATCACTTTGGAAGTTGAACCCTCC 308736 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || ||| ||||| ||||| ||||| || || || || || Sbjct 308735 GACACGATCGAGAATGTTAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 308676 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||||| || | | ||||||||| | ||||||| | | | | ||||| ||| Sbjct 308675 CAGAGACTTATCTTTGCCGGCAAGCAGTTAGAAGATGGACGCACCCTGTCTGATTACAAC 308616 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || | || || || |||||||||||||||| Sbjct 308615 ATTCAAAAGGAATCAACCCTGCACTTGGTACTAAGATTGAGAGGAGG 308569 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | ||||| ||||| |||||||| ||| |||| || | ||||| || | Sbjct 309027 CAAGATGCAGATTTTTGTGAAAACCTTAACTGGCAAAACGATCACTTTGGAAGTTGAACC 308968 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | |||||| |||||| | || ||| || || ||||| ||||| || || || || Sbjct 308967 CTCCGACACGATCGAGAATGTTAAAGCTAAAATCCAGGACAAGGAAGGAATTCCCCCAGA 308908 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || |||||||| || | | ||||||||| | ||||||| | | | | ||||| Sbjct 308907 CCAGCAGAGACTTATCTTTGCCGGCAAGCAGTTAGAAGATGGACGCACCCTGTCTGATTA 308848 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| ||||| || | || || || |||||||||||||||| Sbjct 308847 CAACATTCAAAAGGAATCAACCCTGCACTTGGTACTAAGATTGAGAGGAGG 308797 >seq219 Length=603346 Score = 152 bits (168), Expect = 4e-32 Identities = 907/1430 (63%), Gaps = 48/1430 (3%) Strand=Plus/Plus Query 131864 ACGGTGAATTGAATTGTATTCGCAGCAGGCTTAGTTCTTAAATAATACATGCCCGTCTTC 131923 ||||||||||| || | ||| ||||| || || |||| |||||| |||||||| || ||| Sbjct 377142 ACGGTGAATTGTATAGCATTGGCAGCTGGTTTTGTTCGTAAATAGTACATGCCAGTTTTC 377201 Query 131924 AAGCCTTTCTCCCAAGAATAATTGTGTATGGACGATAAAATTTTGTAGCTGGGATTGGCC 131983 | || | | ||| | ||| ||||||||| | ||| || || | || | || Sbjct 377202 AGACCCATTTTCCATGCGTAAAAGTGTATGGATGTTAATTTTCCATAATTTGGTTCTGCG 377261 Query 131984 ACAAACAGATTGAGCGATTGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCATATTC 132043 ||| | || | || ||||| || || || | | ||| ||||| || ||||| || Sbjct 377262 ACATGTATGTTAAATGACTGACTTTGGTCTATAAAGGCTCCTCTGTCCGCAGCCAT-TTG 377320 Query 132044 AACAATACTTTCTGCTTAATT-TCCCAAGCGGTCTTGAAGAGCGCCTTGACGTCGTGTGG 132102 || | | | | || | ||||| | || || | || | ||| ||| | || Sbjct 377321 AATTGTTGTCTTGACGGAAATCTCCCATACTGTTTTATACAGATCTCTGATGTCTTTGGG 377380 Query 132103 AATGTCATCGATATTCTGTACAGATCCGTTGTTTTTGATAATTTTCATCATCAGTTCTG- 132161 || | || || ||||| | || || ||||| | ||||| || ||| |||| Sbjct 377381 TATTGCTTCAATGTTCTGAATGGAACCATTGTTATGTATAATGAGATTCTTCATTTCTTC 377440 Query 132162 -TCGAGTACA--CGTTGCAGTCTACGAGTTTATCGACGAGATGTTGATTTACTATTTGAT 132218 || || | || | |||| | ||| ||||| || || || | |||| Sbjct 377441 ATCCCATAGATCCGCTTGAGTCAAATCTGTTAAA----AGATGATGGTTGACCACTTGAA 377496 Query 132219 ATTCACCCGATAAGACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGATTCGT 132278 | || || || || |||| || | ||| | || ||||| || || |||||||| | Sbjct 377497 ACTCTCCAGACAAAACTCGTCTTTGGTAAATGTTTGATGTAAAAGGTTCAAACGATTCAT 377556 Query 132279 TGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATGTAGGCAATCAATAATGAATTGC 132338 | ||||| | ||||||||| || | || || ||||| || | | | ||||| | Sbjct 377557 TATTTCCTAGTATTTGAGCGGTGGAGGCAGTGGGCATTGGCGCTAATAGAAGGGAATTAC 377616 Query 132339 GCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCCCAGTTCCACAGATCATTCGATT 132398 | || || || | || |||| |||||| | |||| | ||| ||||| | | | Sbjct 377617 GAAGACCATGCTTTGCAATTTTTTCTTTAAGAGCAGCCCAATCCCAAAGATCTGTGGGT- 377675 Query 132399 GAGAGATATTCCACAAATCAAACTGTAAATGACCGCTACTTGCAGGAGATCCGTTATAAG 132458 | | ||||||| ||| |||||| | || || |||||| ||| | |||| Sbjct 377676 --GTTTTGTTCCACATATCGTACTGTAGAATCCCTTGGCTAGCAGGACTTCCCTCGTAAG 377733 Query 132459 AATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTCTGACTC-AGGGCACCATAATAA 132517 ||| | || | | | ||| | || || || ||| || ||||| ||||| Sbjct 377734 TGCTGTAAACACCATCTCTCTCGGCTAACTCACAACT-TGCCTCGAGCGCACCGTAATAG 377792 Query 132518 ATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTGTTGACTGTCGTAGGGCAAATTT 132577 || || || | |||| ||| | | |||| | | ||| || || || || | Sbjct 377793 ATCGTTTCAAATATTTGCTGATTAAGTAATATTGCCTTCTCACTCTCATACGGTAATCTC 377852 Query 132578 AAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATACCGATGGGTCTATGTTTAAAA 132637 | || | | || ||||| || | |||||||| ||||||||| ||||| || ||||| | | Sbjct 377853 ATAAGAACAAATGCATCCGCTAATCCCTGAACGCCGATACCAATGGGCCTGTGTTTCATA 377912 Query 132638 TTCGATACTTGTGCGCTAGTCAGCGGATAAAAGTTTTTGTCTATTATTTTATTGAGATTG 132697 ||||| || || | | ||||||||||| || || ||||| || ||||| Sbjct 377913 TTCGAGTTTTTCGCCTCCGGTACAGGATAAAAGTTGACATCAATAATTTTGTTCAGATTT 377972 Query 132698 TTAGTGACAACTCTAGCCACTTTATATAGCGATTCAAAGTCAAAGTTTTTAGTCCTTTTG 132757 | || ||| | ||| |||| | || || || || || | ||||| Sbjct 377973 TGTGTAACAGTTTTAGTTACTTCTTTCAGTTTTTTGAAATCGAATT---------TTTTG 378023 Query 132758 TTGGCA--AAACA-ATTGACGGCAATCGAGGCCAAATTGCATACGGCTGTCTCTTTATTA 132814 || || ||||| ||| | || || ||||| | |||||| ||||| ||| | | Sbjct 378024 TTTTCAACAAACATATTTAGAGCTATTGAGGCGAGATTGCACACGGCAACCTCATCTTCC 378083 Query 132815 TCGCTATACTGTACGATTTCTGCACACAAATTACTGTTTCGAATAACTCCCAAGtttttt 132874 |||| | || ||||| | ||||||||||||| | ||| ||| | |||||| Sbjct 378084 GATGTATATTCAACAATTTCAGTACACAAATTACTGCATTTGATAGTTCCAAGATTTTTT 378143 Query 132875 tGATTGTTTTTCTCGTTTACGT-TATCTTTATGCAACATGTACGGACCTCCGGTTTCGAC 132933 ||||| |||| || |||| | |||||| | || |||||| ||| || |||||||| Sbjct 378144 TGATTACTTTT-TCTGTTACATGCATCTTTGTACAGCATGTATGGAGTACCAGTTTCGAC 378202 Query 132934 CTGAATTTCGATAAT--TTTTCTGTGAAGATCTAACGCCAAAATTTGTTCTTTAAACTTG 132991 || ||| ||||| |||| | || |||| | || | ||| || || | Sbjct 378203 TTGCGCTTCAATAATGGCTTTCCAT-AATATCTGA-GCGCGTACTTG-CCTGACAAAT-- 378257 Query 132992 CCCTG-AGTCTCGT--AACTTTCGTATA-ATCGC-TCAAATTCTTCGCCATAGCAGTCGT 133046 ||| ||| || | |||| ||| | ||| ||||||||||| || || || || | Sbjct 378258 --CTGTTTTCTTGTTCATATTTCTCATACAACGCTTCAAATTCTTCACCGTAACAATCAT 378315 Query 133047 TCAAACCGGGACACTCGTCAGGACACATCAATGACCATTTTTCTCCTGCGCTC-ACCCTT 133105 | || ||||| | | |||||||||| ||| ||||| | | ||| ||||| Sbjct 378316 AAAGCCCTGGACAGTTATGGGGACACATCAGACTCCAATTTTC-ATTTCTCTCAACCCTC 378374 Query 133106 TTCATGAACAACGAAGGTGTCCACATGGCAAAAAATAAATCGCGAGCCTTCATATCTTCC 133165 ||||||||||| ||| |||| | ||| |||| || || | ||| ||| |||||| Sbjct 378375 TTCATGAACAAATCTGGTATCCATAGAGCATAAAACAATTCTCTGGCCCTCACTTCTTCC 378434 Query 133166 GCGCCCATATTTCGTTTCAAGTCCaaaaaagtaaaaaTGTCTGCATGCCAAGGCTCGATA 133225 || | || || || |||||||| || || || | |||||| ||||| | | Sbjct 378435 TTTCCTGTGTTCTTCTTTAAATCCAAAAACTCGAAGATATCAGAATGCCACGGCTCCACA 378494 Query 133226 TATACGGCCAAAGCGCCTTTCCTTTTA---CCTCCCTGATCCACATGTCT 133272 || | ||| || || || | |||| || || ||||| |||| ||| Sbjct 378495 TAGATGGCGAATGCTCCCGGACGTTTATTGCCCCCTTGATCAACATATCT 378544 >seq64 Length=1946208 Score = 118 bits (130), Expect = 9e-22 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 23975 TTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCAT 24034 |||||| || ||||||||| | || || || || |||| || ||| | |||||| | Sbjct 785943 TTTTTACAGAACCAAAATGCAGATTTTCGTTAAGACCCTAACGGGTAAAACCATTACCCT 785884 Query 24035 CGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 24094 || || |||||| |||||||||||| | || || ||||| ||||| ||||| Sbjct 785883 AGAGGTTGAGGCCTCTGACACCATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAAGG 785824 Query 24095 CATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAA 24154 || || || ||||| ||| || |||| | || || || ||| | ||||||| | | Sbjct 785823 TATTCCACCAGATCAGCAGCGATTGATATTCGCTGGAAAACAATTGGAAGATGGTCGTAC 785764 Query 24155 CGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGG 24214 | | ||| || || |||||||| |||||||| | ||| | ||||| ||| | ||||| Sbjct 785763 CTTATCCGACTACAATATTCAAAAGGAATCTACCTTGCATCTTGTGTTGAGACTTAGAGG 785704 Query 24215 AGG 24217 ||| Sbjct 785703 AGG 785701 >seq149 Length=636072 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 104909 CTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-GAGCCCCttttttt 104967 |||||||||||||||| ||||| || ||| ||||||| || || | ||| || | || | Sbjct 239461 CTTCATCTCTAGAAATGAGTTCATTACTGAAAGTCAAACCGGGCATGAGACCTCTCTTCT 239402 Query 104968 GTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGACACCTTCGACGATG 105027 | || || |||| | |||||||||||| ||||| || | ||||| || Sbjct 239401 -------TCATCCAGAAGATAGAAGCAAAACTACCAGAGAAGAAAATCCCTTCAACAGCA 239349 Query 105028 GCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGACTTTCAATCCATTTCTGAGCC 105087 ||||| || || ||||| || | ||||| || || | ||| ||||||| | | ||| Sbjct 239348 GCAAATGCAACAATGCGCTCTCCAAATGTGGCCGTCTTACTGGCAATCCACTGAAGGGCC 239289 Query 105088 CATGTTGCCTTC 105099 || ||||||| Sbjct 239288 CAATCTGCCTTC 239277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429907731036225