Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq445 233 2e-56 seq131 122 9e-23 seq221 120 3e-22 seq84 100 3e-16 seq124 98.7 1e-15 seq150 96.9 4e-15 seq64 96.9 4e-15 seq6 96.9 4e-15 seq155 95.1 1e-14 seq147 95.1 1e-14 seq130 95.1 1e-14 seq125 95.1 1e-14 seq20 95.1 1e-14 seq1465 93.3 5e-14 seq179 91.5 2e-13 seq176 89.7 6e-13 seq56 89.7 6e-13 seq217 87.8 2e-12 >seq445 Length=79264 Score = 233 bits (258), Expect = 2e-56 Identities = 809/1246 (65%), Gaps = 41/1246 (3%) Strand=Plus/Minus Query 94975 ggggCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGACAAGGTGCCC 95034 || ||||| || || |||||||| || ||| | || || |||| || ||||| Sbjct 27716 GGAGCTTACTTCGTTGAATGGGGTGTATACCCCAGGAAATTCCCCGTCGATCGTGTGCCG 27657 Query 95035 ATTCCCAATCTGACGCATCTATTGTACGGTTTCATACCCATTTGCGGAGGCGACGGTATC 95094 ||||| ||||| || ||||| | |||||||||||||| || || || || || || || Sbjct 27656 ATTCCAAATCTCACACATCTTCTTTACGGTTTCATACCGATATGTGGGGGTGATGGCATT 27597 Query 95095 AACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCGGC 95154 || |||||| ||||| | | || |||| | || |||| ||||| || Sbjct 27596 AATGACAGTTTAAAAGAAATCGAGGGAAGTTTTCAAGCACTACAGCGTTCATGCAGTGGT 27537 Query 95155 AGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAAAA 95214 | || ||||| |||||| |||||| || || | |||| |||| ||||| |||| | Sbjct 27536 CGGGAAGATTTTAAGGTTTCCATCCATGATCCTTGGGCTGCTTTACAGAAACCTCAAAGA 27477 Query 95215 GGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGCTATTCGC 95274 ||| | ||| | ||||||||||| ||||||||||| || | ||| | ||| Sbjct 27476 GGTCTATCCTCCTGGAATGAACCTTATAAAGGCAATTTTGGTCAATTGATGTC-ATT--G 27420 Query 95275 AAACA---TAATCCTCATTTGAAAATTTTGCCTAGCATCGGTGGTTGGACACTGAGC-GA 95330 ||||| ||| || | ||||| ||||| || || ||||| ||||| | ||| || Sbjct 27419 AAACAAGCTAAACCAGACTTGAAGATTTTACCATCAATTGGTGGGTGGAC-TTTAGCTGA 27361 Query 95331 CCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACTCTGTTCGTGA 95390 ||||||| || ||| | || | ||| ||| | |||||| || |||||| || Sbjct 27360 TCCTTTCTTCTTCTTCACTGATAAGAGTAAGCGACAGCGATTTGTAGAATCTGTTAAAGA 27301 Query 95391 ATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTTTCCCGGCGG 95450 ||| | | ||||| || || || || || || || ||||||||||| || || || Sbjct 27300 TTTCCTTTTAACCTGGAAATTCTTTGACGGTGTTGATATTGACTGGGAGTTCCCTGGTGG 27241 Query 95451 AAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACATATGTAACTCT 95510 || ||||| ||||| ||| | || | || | | ||||| || || | | | Sbjct 27240 TAAAGGTGCTAACCCAGACCTCGG-AAGCCCA--GAAGATGGTGCTGTTTACGTTAGTTT 27184 Query 95511 ATTGAAAGAACTACGCCTAATGCTAGACGAACTGGGTG-------TGGTGAACAAACGCG 95563 || ||||| |||| |||||| || || | || |||| |||| Sbjct 27183 GATGGAAGAATTACGTGAAATGCTTGATGATTTATCTGCTACCACTGGT---AAAAC--- 27130 Query 95564 TGTACGAGTTGACCAGCGCCGTGGGAGCGGGCTACGATAAAATAGACGTGATAGATTACT 95623 |||||| ||||| || | | || || | || ||||| | || | |||||| Sbjct 27129 -GTACGAACTGACCTCAGCAATCAGTGCTGGATGGGACAAAATTCAGGTTGTCGATTACG 27071 Query 95624 CTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTTAAAGGCGCAT 95683 | || ||||| |||| || | || | ||||||||||| || ||||| |||| Sbjct 27070 CAAAAGCGCAACAATACATGGACCACATTTTCGTTATGAGTTACGATTTCAAAGGAGCAT 27011 Query 95684 GGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAACCCTGACG 95743 |||| || |||||| |||||||| || ||||| ||||| | ||||| ||| | | Sbjct 27010 GGTCAAATGATACTTTGGGACATCAAACTCCGTTGTATGCACCGGCATGGAATCCTAAAG 26951 Query 95744 ACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTTAAGCAAAAAGTACCTTCCAACA 95803 | | |||||||| |||| | || ||| | || | ||| || | | || | Sbjct 26950 AGACTTACACAACCGACTTCGGTGTGAAATATTTGTTAGCTCAAGGTGTGTCACCGAAAA 26891 Query 95804 AAATTGTTGTGGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGATTACAAAA 95863 | || || || || || || ||||| || |||| |||| ||| || | | |||| | Sbjct 26890 AGATCGTAGTTGGTGTTGCTATGTATGGTCGAGGATGGACTGGGGTTAATGGTTACGAGG 26831 Query 95864 ACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGCACATGGGAAAACGGTG 95923 ||||| ||| || ||| || || || || || ||||| |||||| || |||||| Sbjct 26830 GAAATAATCCATTCACAGGCAATGCTACTGGACCAGTCAAAGGAACATGGCAAGACGGTG 26771 Query 95924 TCGTCGATTATAGGCAA---GTTAACGATTTTAAAAACAGTCCAGCTTACACTTACGCTT 95980 | | |||||||| || | ||||| | | || | | | || | | | Sbjct 26770 TTATTGATTATAGAGAAATCGCCAACGAAAT--AGCCCAAGGAAAATGGGAATTCCAC-T 26714 Query 95981 ACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGACCAGGCGTTGGATCTGA 96040 ||||||| || ||| |||| || || || | | | || | ||| | ||| || Sbjct 26713 ACGACAATGTAGCCCAGGCTCCTTATGTCTTCAGACCAT-CTACCGG-----GGACCTCG 26660 Query 96041 TTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTTACAGAATAATT 96100 | ||||||| | | || || | | || || | || || | ||||| Sbjct 26659 TCACTTACGATAATGCAAGATCTGTTATTGAAAAGGGTAAATATGTAAGGAATAATAAAC 26600 Query 96101 TAGGTGGTTTGTTTGCATGGGAAATAGATGCCGATAATGGTGATTTGTTAAACGCCATGA 96160 | |||||| | || || |||||||| |||||||| ||||||||||| | ||||| |||| Sbjct 26599 TCGGTGGTCTCTTCGCGTGGGAAATTGATGCCGACAATGGTGATTTACTGAACGCTATGA 26540 Query 96161 ACACAGGTCTGGGCAACAGCCCTGCCACTAA-TATAGT-TGAAAAT 96204 ||| ||| |||| ||||| || || ||| |||||| ||| ||| Sbjct 26539 ACATGGGTTTGGGTAACAGTCCAGC--GTAATTATAGTATGATAAT 26496 >seq131 Length=856804 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| || | | ||||| |||| || ||||||||||| |||||||||| | Sbjct 308113 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308172 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||| |||||| || || || || |||| ||||||||| | || Sbjct 308173 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308232 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||||||||| ||| || ||| | || | | ||||||| | ||| || Sbjct 308233 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAACATTCTCGATCGTGTCGGAGGGTTCAACT 308292 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || |||| || ||||||||||||||||| Sbjct 308293 TCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308339 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| || | | ||||| |||| || ||||||||||| |||||||||| | Sbjct 308341 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308400 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||| |||||| || || || || |||| ||||||||| | || Sbjct 308401 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308460 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||||||||| ||| || ||| | || | | ||||||| | ||| || Sbjct 308461 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAACATTCTCGATCGTGTCGGAGGGTTCAACT 308520 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || |||| || ||||||||||||||||| Sbjct 308521 TCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308567 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| || | | ||||| |||| || ||||||||||| |||||||||| | Sbjct 308569 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308628 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||| |||||| || || || || |||| ||||||||| | || Sbjct 308629 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308688 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||||||||| ||| || ||| | || | | ||||||| | ||| || Sbjct 308689 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAACATTCTCGATCGTGTCGGAGGGTTCAACT 308748 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || |||| || ||||||||||||||||| Sbjct 308749 TCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308795 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| || | | ||||| |||| || ||||||||||| |||||||||| | Sbjct 308797 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308856 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||| |||||| || || || || |||| ||||||||| | || Sbjct 308857 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308916 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||||||||| |||||| ||| | || | | ||||||| | ||| || Sbjct 308917 ATTCCTTCCTTGTCCTGGATTTTAGCTTTAACATTCTCGATCGTGTCGGAGGGTTCAACT 308976 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | ||||| |||||||| |||| || || ||||| || ||||| || Sbjct 308977 TCCAAAGTGATCGTTTTGCCAGTTAAGGTTTTCACAAAAATCTGCATCTT 309026 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| || ||||||| ||| || || | || |||| |||||| || || || Sbjct 307921 TCCTTTTGAATGTTATAATCAGACAGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAG 307980 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||| ||||||||| | || | | ||||||||| ||| || ||| | || Sbjct 307981 ATAAGTCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCTTTAACATTC 308040 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||| | ||| || || | ||||| ||||| || |||| || |||||| Sbjct 308041 TCGATCGTGTCGGAGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACA 308100 Query 42198 AAGATTTGCAT 42208 ||||||||||| Sbjct 308101 AAGATTTGCAT 308111 >seq221 Length=486136 Score = 120 bits (132), Expect = 3e-22 Identities = 201/286 (70%), Gaps = 10/286 (3%) Strand=Plus/Plus Query 41933 TAAGTGATTGAACAGT--TACTGTAAA--ATATTATAT--ATA-TTAATTTATCGA---C 41982 ||| |||||||| | | ||||| ||| |||||| | ||| || || | || | | Sbjct 78285 TAATTGATTGAATATTAATACTGCAAAGGATATTAATTGAATAATTGATGTTTCAAATTC 78344 Query 41983 CTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCA 42042 | ||||| | ||| | || |||||||| || |||||| || || ||||| |||| | Sbjct 78345 CGCCTCTGAGACGGAGAACTAAATGCAAGGTAGACTCCTTCTGGATGTTGTAGTCAGAAA 78404 Query 42043 GAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCA 42102 | || || |||| || |||||||||||||| || || || ||||| ||||| | || | Sbjct 78405 GTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCTGGAGGGA 78464 Query 42103 CGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACAT 42162 || |||||||| ||||||| || | || | | |||||| | ||| || | Sbjct 78465 TGCCTTCCTTGTCTTGGATTTTTGCCTTTACATTCTCTATGGTGTCGGAGGGTTCGACTT 78524 Query 42163 CGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | | |||||||||||||| || | ||||| || ||||| ||||| Sbjct 78525 CTAGGGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 78570 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| |||| || || || |||| || |||||||||||||| || Sbjct 78608 TCCTTCTGGATGTTGTAGTCAGAAAGTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAG 78667 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||| ||||||| || | | || ||||| |||||| ||| | || Sbjct 78668 ATCAGACGCTGTTGGTCGGGAGGGATACCTTCTTTGTCTTGGATTTTCGCTTTTACATTC 78727 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| | ||| || || | |||||||||||||| || | ||||| || Sbjct 78728 TCAATTGTGTCTGAAGGTTCGACTTCTAGGGTGATGGTTTTGCCAGTCAAGGTCTTGACG 78787 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 78788 AAGATCTGCAT 78798 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| |||| || || || |||| || |||||||||||||| || Sbjct 78836 TCCTTCTGGATGTTGTAGTCAGAAAGTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAG 78895 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||| ||||||| || | | || ||||| |||||| ||| | || Sbjct 78896 ATCAGACGCTGTTGGTCGGGAGGGATACCTTCTTTGTCTTGGATTTTCGCTTTTACATTC 78955 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| | ||| || || | |||||||||||||| || | ||||| || Sbjct 78956 TCAATTGTGTCTGAAGGTTCGACTTCTAAGGTGATGGTTTTGCCAGTCAAGGTCTTGACG 79015 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 79016 AAGATCTGCAT 79026 >seq84 Length=612729 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 116445 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 116504 Query 57065 TATACTACCGAGGAT 57079 ||||||||||||||| Sbjct 116505 TATACTACCGAGGAT 116519 >seq124 Length=522509 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 410456 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 410397 Query 57067 TACTACCGAGGATT 57080 |||||||||||||| Sbjct 410396 TACTACCGAGGATT 410383 >seq150 Length=751698 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 636560 AAAAAATTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 636619 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||||||| || Sbjct 636620 TGACCACTATACTACCGAAGA 636640 Score = 93.3 bits (102), Expect = 5e-14 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 56996 TGAAAAATTTTCTC-CTC-GGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 ||||||| | |||| ||| ||| | |||||||||| ||||||||||||||||||||| Sbjct 270549 TGAAAAAATATCTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 270608 Query 57054 ATACTCACCACTATACTACCGAGGA 57078 ||||| |||||||||||||||| || Sbjct 270609 ATACTGACCACTATACTACCGAAGA 270633 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 641130 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 641189 Query 57066 ATACTACCGAGGATTGAATATA 57087 |||||||||| || | | |||| Sbjct 641190 ATACTACCGAAGACTTACTATA 641211 >seq64 Length=1946208 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | | |||||| | |||||| || ||||||||||||||||| || | Sbjct 785700 ACCTCCTCTAAGTCTCAACACAAGATGCAAGGTAGATTCCTTTTGAATATTGTAGTCGGA 785759 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | || || | || || | || || ||||||||||| | ||||||||| || | ||| Sbjct 785760 TAAGGTACGACCATCTTCCAATTGTTTTCCAGCGAATATCAATCGCTGCTGATCTGGTGG 785819 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | |||||||| ||| || || | || | | ||||| | || || Sbjct 785820 AATACCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATGGTGTCAGAGGCCTCAAC 785879 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | || |||||||| |||||||| ||||| || || || |||||||| Sbjct 785880 CTCTAGGGTAATGGTTTTACCCGTTAGGGTCTTAACGAAAATCTGCATTTT 785930 >seq6 Length=1953610 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 56993 TTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 57052 |||| ||||| ||||| |||| | |||||||||| ||||||||||||||||||||| Sbjct 1135486 TTATAAAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 1135427 Query 57053 CATACTCACCACTATACTACCGAGGA 57078 ||||| |||||||||||||||| || Sbjct 1135426 GATACTGACCACTATACTACCGAAGA 1135401 >seq155 Length=416050 Score = 95.1 bits (104), Expect = 1e-14 Identities = 84/103 (82%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 56983 AAATTAACGTTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGT 57042 ||||||| |||| |||| | |||| |||| | |||||||||| |||||||||||| Sbjct 210928 AAATTAA--TTTACAAAAAGTGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGT 210985 Query 57043 GACAGGCGGACATACTCACCACTATACTACCGAGGA--TTGAA 57083 ||||||||| ||||| |||||||||||||||| || ||||| Sbjct 210986 GACAGGCGGGGATACTGACCACTATACTACCGAAGACGTTGAA 211028 >seq147 Length=647312 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| || |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 44280 AAAAGTTATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 44221 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 44220 TGACCACTATACTACCGAAGAT 44199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| |||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 127269 AAAAGGTTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 127328 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 127329 TGACCACTATACTACCGAAGAT 127350 Score = 91.5 bits (100), Expect = 2e-13 Identities = 85/106 (80%), Gaps = 3/106 (3%) Strand=Plus/Minus Query 56975 TTAACAACAAATTAACGTTTATGAAAAATTT-TCTCCTCGGCAAGAAATCGAACCCTGGT 57033 |||| || |||| || | || |||| | | |||| |||| | |||||||||| ||| Sbjct 123129 TTAAGAAGAAATGAAATTCTA--AAAAGTGTGTCTCTCCGGCGGGGAATCGAACCCCGGT 123072 Query 57034 CTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||||||||||| ||||| |||||||||||||||| ||| Sbjct 123071 CTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAAGAT 123026 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| | |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 46625 AAAAGGTGTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 46684 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 46685 TTACCACTATACTACCGAAGAT 46706 Score = 89.7 bits (98), Expect = 6e-13 Identities = 77/93 (83%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 56988 AACGTTTATGAAAAATTT-TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACA 57046 ||||| || |||| | | |||| |||| | |||||||||| |||||||||||||||| Sbjct 47561 AACGTGTA--AAAAGTATGTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACA 47618 Query 57047 GGCGGACATACTCACCACTATACTACCGAGGAT 57079 ||||| ||||| |||||||||||||||| ||| Sbjct 47619 GGCGGGGATACTGACCACTATACTACCGAAGAT 47651 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| | |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 50480 AAAAGGTGTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 50421 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 50420 TGACCACTATACTACCGAAGAT 50399 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 53428 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 53487 Query 57066 ATACTACCGAGGAT 57079 |||||||||| ||| Sbjct 53488 ATACTACCGAAGAT 53501 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 54412 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 54471 Query 57066 ATACTACCGAGGAT 57079 |||||||||| ||| Sbjct 54472 ATACTACCGAAGAT 54485 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 57292 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 57233 Query 57066 ATACTACCGAGGAT 57079 |||||||||| ||| Sbjct 57232 ATACTACCGAAGAT 57219 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 44644 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 44703 Query 57066 ATACTACCGAGGA 57078 |||||||||| || Sbjct 44704 ATACTACCGAAGA 44716 >seq130 Length=531438 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/81 (86%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||||| ||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 490851 AAAAATTCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 490908 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||||||| || Sbjct 490909 TGACCACTATACTACCGAAGA 490929 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 56994 TATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 ||| ||||| |||| |||| | |||||||||| ||||||||||||||||||||| Sbjct 498230 TATAAAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 498171 Query 57054 ATACTCACCACTATACTACCGAGGA 57078 ||||| |||||||||||||||| || Sbjct 498170 ATACTGACCACTATACTACCGAAGA 498146 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 462539 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 462598 Query 57066 ATACTACCGAGGA 57078 |||||||||| || Sbjct 462599 ATACTACCGAAGA 462611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 484802 AAAAAACATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 484743 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||||||| || Sbjct 484742 TGACCACTATACTACCGAAGA 484722 >seq125 Length=491055 Score = 95.1 bits (104), Expect = 1e-14 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 56998 AAAAATT-TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||| || ||||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 84002 AAAAGTTGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 84061 Query 57057 CTCACCACTATACTACCGAGGA-TTGAATAT 57086 || |||||||||||||||| || ||| |||| Sbjct 84062 CTGACCACTATACTACCGAAGACTTGTATAT 84092 >seq20 Length=1221564 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 491343 AAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 491402 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 491403 TGACCACTATACTACCGAAGAT 491424 >seq1465 Length=1545 Score = 93.3 bits (102), Expect = 5e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 56993 TTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 57052 |||| ||||| |||| |||| | |||||||||| ||||||||||||||||||||| Sbjct 799 TTATAAAAAAAGCTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 858 Query 57053 CATACTCACCACTATACTACCGAGGA 57078 ||||| |||||||||||||||| || Sbjct 859 GATACTGACCACTATACTACCGAAGA 884 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 886 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 945 Query 57066 ATACTACCGAGGA 57078 |||||||||| || Sbjct 946 ATACTACCGAAGA 958 >seq179 Length=350167 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 240009 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 240068 Query 57065 TATACTACCGAGGAT 57079 ||||||||||| ||| Sbjct 240069 TATACTACCGAAGAT 240083 >seq176 Length=968888 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 329156 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 329215 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | |||||||||||||||| || || Sbjct 329216 TGACCACTATACTACCGAAGACTG 329239 >seq56 Length=833486 Score = 89.7 bits (98), Expect = 6e-13 Identities = 77/93 (83%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 56988 AACGTTTATGAAAAATTT-TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACA 57046 ||||| || |||| | | |||| |||| | |||||||||| |||||||||||||||| Sbjct 811643 AACGTGTA--AAAAGTATGTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACA 811586 Query 57047 GGCGGACATACTCACCACTATACTACCGAGGAT 57079 ||||| ||||| |||||||||||||||| ||| Sbjct 811585 GGCGGGGATACTGACCACTATACTACCGAAGAT 811553 >seq217 Length=298866 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 298730 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 298789 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||||||| || Sbjct 298790 TGACCACTATACTACCGAAGA 298810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543176167086800