Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq12 365 3e-95 seq17 291 6e-73 seq13 172 4e-37 seq36 134 1e-25 seq105 123 2e-22 seq218 109 4e-18 seq26 86.0 5e-11 >seq12 Length=1364364 Score = 365 bits (404), Expect = 3e-95 Identities = 969/1467 (66%), Gaps = 21/1467 (1%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||| | ||| || | |||||||| || |||||||| || | || || ||||| ||||| Sbjct 963256 GGCTGACACGTTTAATATACCATTAGCGTCCAAATCGAAAGCCACGTCGATTTGTGGGAC 963197 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 | | || || || || || | || ||| ||||| ||| |||||| ||||| Sbjct 963196 GTTCCGTGGCGCTGGAGGTATTCCGGTGAGATCAAAGGTTCCTAGAAGATTATTGTCTTT 963137 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 || | | |||||| ||| ||| ||| || || || | | ||||| || | ||| Sbjct 963136 CGTCATAGCCCTTTCACCTTCGTAAACTTGAATTGTCACGGCTGGCTGATTGTCCGCATA 963077 Query 517438 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 ||| || || | || | ||||| || || | | ||| | || | || ||||| Sbjct 963076 AGTCGTGAAGGTTTGCGAATGCTTACACGGTATCTTCGCGTTACGCTCGACTATTTTGGT 963017 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | ||||| |||||||| | ||| | ||| | || || ||||| || | | || Sbjct 963016 CATCACCCCACCGGCTGTTTCGATACCCAAAGACAACGGCGTCACATCCACCAACAAAAC 962957 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 | |||| ||| || | | || | ||||| ||||||| || || ||||| Sbjct 962956 GTCCTGAATTTTGGAATGACGCTCCCCGCTCAATATAGCAGCTTGAACCGCGGCCCCATA 962897 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TG 517676 ||||| ||||| || || |||| || || |||||||| || || || || || || Sbjct 962896 AGCAACGGCTTCGTCCGGGTTAATAGACAAGTTGAGTTTTTTCCCGTTAAAGAAGTTCTG 962837 Query 517677 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 517736 || ||| | | | | ||| ||||| || | || || || || || || || || | | Sbjct 962836 CAACAAGCTTTGT-ATCTTCGGAATGCGGGTAGAGCCCCCCACCAAAACGATGTCGTTAA 962778 Query 517737 CCTGTGA---TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCG 517793 || || ||| |||| |||| ||| || ||||||| || || || | Sbjct 962777 --TG-GAGTTTTTGTCCAACTTTGCATCTTTCAACGCTTTTTCTACTGGATCCAATGTTA 962721 Query 517794 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAAT 517853 | | ||||| |||| | |||||||| || ||||| | || || || | | | Sbjct 962720 CGCGGAACAAATCTGCATTCAGTTCTTCAAAACGCGCTCTGGAAATTCTGGAATAAAAGT 962661 Query 517854 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 517913 |||| || || || |||| ||| | |||||| | | || ||| ||||| | | | Sbjct 962660 CAATGCCCTCAAATAAAGCATCGATTTCAATATTCGCTTCAGTACTGGAAGACAAAGTCC 962601 Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AA 517971 |||||| || || |||||||| || | || || || || | | ||| | | || Sbjct 962600 TTTTAGCGCGCTCCGCAGCTGTCCTAAGACGACGCAATGCCTTCG--GGTTGGTACGCAA 962543 Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031 ||| |||| | ||||| || || || ||| | | | |||| || || || || || Sbjct 962542 ATCCTTTTTGTGCTTTCTTTTAAATTCATCAGCCAAAAAGTTTACCAGGCGGTTGTCGAA 962483 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATC 518088 ||||| || || | | || | ||||| |||||| |||||| ||| || ||| || Sbjct 962482 GTCTTCGCCACCTAGATGTGTGTCTCCTGCTGTAGCTTTTACTTCGAAGAGCGATCCCTC 962423 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 || | | | | || ||| || || || || | ||| ||||| || ||||| Sbjct 962422 GTCGATGTTAAGTATGGAGACGTCAAATGTACCCCCTCCAAGATCGAAAATTAGAACATT 962363 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 |||| | | |||||||| || ||||| |||| ||||| ||||||||||| || Sbjct 962362 TCTTTCCCCTTTCAGATTTTTATCCAGCCCATAAGCAAGGGCAGCTGCAGTTGGTTCGTT 962303 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 || || | | ||||| || ||||| ||| |||||| |||||||| ||||| | || Sbjct 962302 GATGATACGGAGGACATTGAGGCCAGCGATTGCTCCTGCGTCTTTAGTAGCTTGGCGCTG 962243 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATA 518328 || || || || || || || || || || || |||| | ||| | | || | ||| Sbjct 962242 AGAGTCATTGAAGTAAGCTGGGACCGTTATGACAGCATTTTTGACTGATCTTCCCAGATA 962183 Query 518329 AGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCAT--TGATGAAATTTGTTCTGGGGAA 518386 || ||||| | ||||||||| | | || ||| | ||| | | ||| || | | Sbjct 962182 TGCCTCGGCCGTATCTTTCATTTTCGTCAGAACCATGCTACTGA--TCTCTTCGGGTGCA 962125 Query 518387 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 518446 | | |||| || | ||| | ||||| | | |||||| | || | ||||| Sbjct 962124 AAACGTTTGGTCTCGCCCTTATAAGTTACTTGTATCTTCGGTTTACTGCCCTCGTTAATG 962065 Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACC 518505 ||||| || ||||||| ||| | |||| || | ||| || |||| ||| | ||| || Sbjct 962064 ACTTTGAAAGGCCAGTGTTTGAGATCTTGCTGGAT-CTTAGGATCATCAAACTTTCTGCC 962006 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 || | |||||||| ||||| || ||||| || |||| || | || | |||||| Sbjct 962005 TATGAGACGTTTTGCGTCAAAGATTGTATTAACGGGGTTAAGAGCGACCTGGTTTTTGGC 961946 Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625 || ||||| || || |||| || || ||||| | ||||| || || ||||| | ||| Sbjct 961945 AGCGTCTCCGATGAGGCGTTCGGTGTCCGTAAACGCTACATAAGAAGGTGTTGTTCTATT 961886 Query 518626 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 518685 ||||||||| || || ||||| || || ||||||| |||||||||||| || ||| | | Sbjct 961885 ACCTTGATCGTTAGCTATAATATCTACATTACCATGTTGCCATACACCGACGCAAGAATA 961826 Query 518686 AGTTGTTCCTAAATCAATACCAATAGC 518712 ||| ||||||||||| || || || || Sbjct 961825 AGTCGTTCCTAAATCTATTCCGATTGC 961799 >seq17 Length=1813267 Score = 291 bits (322), Expect = 6e-73 Identities = 962/1469 (65%), Gaps = 39/1469 (3%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 ||||| | || ||||| ||||| | ||| || || || || |||| ||| || |||| Sbjct 1127028 ACATTCAAGATTCCATTAGCATCGAGATCGAAAGTTACATCTATTTTAGGAACACCTCGA 1127087 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 | || ||||| || || || || || || | |||||| ||||| || | Sbjct 1127088 GGTGCTGGTGGAATACCCGTCAGATCGAAACGACCTAATAGATTATTGTCTTTGGTCATA 1127147 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 | |||||| ||| | | || || || || | | ||| ||||| ||||| || || Sbjct 1127148 GCCCTTTCACCTTCGTACACCTGTATGGTGACGGCGGGTTGGTTATCAGAATATGTAGTG 1127207 Query 517445 AATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 || | || ||| || || || ||| | | |||| || || || || ||||| | Sbjct 1127208 AAGGTT-TGACTTTGCTTGCATGGTATTTTAGCATTTCGTTCGATGATCTTCGTCATGAC 1127266 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 || || |||||||| | || | ||| ||||| | || || || | | || | ||| Sbjct 1127267 TCCTCCAGCTGTTTCGATGCCCAAAGACAGAGGCGCCACGTCCACCAACAGAACGTCTTG 1127326 Query 517564 AAGTTTTTCATCAGTT--TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 517621 | |||| | ||| | ||| || || || ||||| | || || || || || Sbjct 1127327 GA--TTTTACTGTGTTGTTCACCGCTTAGGATGGCCGCTTGCACCGCCGCTCCGTAAGCG 1127384 Query 517622 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAG 517680 || || || ||||| || | | ||||| |||||| ||| ||| || || |||| Sbjct 1127385 ACCGCCTCGTCAGGGTTGATGGAGAGATTTAATTTTTTGCCACAGAAGAAGTTCTGAAGC 1127444 Query 517681 AAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 517740 | ||| | | ||| |||||||||| || ||||| || | || | ||||| | || Sbjct 1127445 ATGTTTTGA-ATCTTCGGAATACGAGTAGAACCTCCGACGAGGACCACATCATGAA--TG 1127501 Query 517741 TGA--TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTA 517798 | ||| || || || | |||| ||| | ||||| || ||||| | || || | Sbjct 1127502 GAACTTTTGTCAAGCTTGGCATCCTTCAAAGCCTTTTCGACCGGTTCCAA---CGTTCCA 1127558 Query 517799 ---AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGT-GACATTATAA-T 517853 || ||||| || | |||||| ||| |||||| || ||| | || || || | Sbjct 1127559 CGGAATAAGTCAGAGTTTAATTCTTCAAATCTAGCTCGAG--AGACTCGAGTGTAAAAGT 1127616 Query 517854 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 517913 | || ||||| | | ||||| ||| | || | || || ||| || |||| | Sbjct 1127617 CGATGCCTTCATGTAGTGCATCAATTTCCAAAGTGGCTTCCGTGCTAGAGGAAAGTGTGC 1127676 Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA- 517972 ||||||| | || ||||| | |||||| || | ||| || ||| | || Sbjct 1127677 GTTTAGCTCTCTCCGCAGCTGTACGTAGTCTACGCAGAGCTCGTGA--ATTACCACGAAG 1127734 Query 517973 -TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCA 518029 || ||||||| || | || || || || | | ||| | || | || || || Sbjct 1127735 ATCCTTTTTATACTTGCGTTTAAATTCAGCAGCTAA--ATGATCGACTAAGCGGTTGTCG 1127792 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA--AAGT-CCA 518086 || ||||||||||||| | || | |||| |||| | || | ||| ||| || Sbjct 1127793 AAGTCTTCACCTCCCAGATGGGTGTCACCTGCTGTAGACTTCACCTCGAACAAAGAGCCT 1127852 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 || || | || | | | |||||| ||| || || || | || || || | ||| Sbjct 1127853 TCATCTATAGTGAGGATGGATACATCGAAGGTGCCGCCTCCGAGGTCGAATATTAATACG 1127912 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 ||| | || | | |||||||| ||||||||||| |||||||||||||| |||||| Sbjct 1127913 TTCCTCTCACCTTTAAGATTTTTATCCAGACCATACGCCAAAGCAGCAGCAGTAGGTTCA 1127972 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 || || |||| |||||||| | ||||| || | ||| |||||||| ||||| || | Sbjct 1127973 TTGATTATTCGTAAAACATTTATTCCAGCTATACCTCCCGCATCTTTGGTGGCCTGACGC 1128032 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 || || |||||||| ||||| || || || || ||||| || || | || | | || Sbjct 1128033 TGGGAGTCGTTAAAGTATGCGGGCACTGTGATCACGGCGTCTCGTA-TGCTGGAGCC-TA 1128090 Query 518327 TAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 || ||||| || |||| |||||| ||| | || | ||| || | |||||| | Sbjct 1128091 AAAACGCTTCAGCAGTTTCTTTCATCTTAGTCAATACCATGCTACTTATCTCTTCTGGTG 1128150 Query 518385 AATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 | | || |||| ||||| || || | || | |||||| | |||| Sbjct 1128151 CGAACCGTTTAATTTCACCTTTGA-ATTCCACCTGAATCTTTGGTTTGCCGCAGTCATTG 1128209 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 || ||||| || ||||| | || |||||| ||| | || |||| | ||| | | Sbjct 1128210 ATGACTTTGAAAGGCCAATGTTGCATATCCTGTTGTATCTTTGGGTCGTCAAACTTGCGG 1128269 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 || |||||||| || ||||| || | || ||| | || || | ||| |||||| |||| Sbjct 1128270 CCTATTAATCGCTTGGCATCGAATACCGTGTTGTTGGGGTTTAATGCTACTTGATTTTTG 1128329 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||||||||| | |||| || || ||||||| || || |||||||| || || Sbjct 1128330 GCAGCATCTCCAATTAAGCGTTCCGTGTCAGTAAATGCGACGTAAGATGGAGTGGTCCGG 1128389 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || ||||| || || || || ||||| || || |||| ||||||||| || ||||| | Sbjct 1128390 TTGCCTTGGTCGTTAGCGATTATTTCCACATTTCCATGTTGCCATACTCCGACACATGAA 1128449 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || ||||| | ||| || ||||| || Sbjct 1128450 TACGTAGTTCCAAGATCGATTCCAATTGC 1128478 >seq13 Length=1808754 Score = 172 bits (190), Expect = 4e-37 Identities = 503/765 (66%), Gaps = 15/765 (2%) Strand=Plus/Plus Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 517854 ||| || ||||||||||||||||||||||| ||||| || | | || |||| Sbjct 498876 TCTGAATAAGTCTGAACAAAGTTCTTCGAAGCGTGCTCTCGTGATCTTAGAATAGAAATC 498935 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 || ||||| || | || ||||| | | | || || ||| || | || || Sbjct 498936 TATGCCTTCATGTAATGCGTCTACTTCTAAACTCGCTTCGGTATTAGAGGACAATGTTCG 498995 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-GATTCAA-A 517972 |||||| | || || || || ||||| |||| || ||||||| |||| |||| || | Sbjct 498996 TTTAGCCCTCTCGCAAGCAGTTCTTAGCCTTCTCAAAGCTTTTG--GATTAGATTTAATA 499053 Query 517973 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAA 518030 || | || || ||||||| || || | | | | ||| | || | || ||| | Sbjct 499054 TCCTTCTTGTACTTTCTCTCAAATTCCTGACAAAA--ATGATCAACCATTCGGCAATCGA 499111 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 ||||||| |||||||| | ||| | || | |||| || |||| || | | | Sbjct 499112 AATCTTCCCCTCCCAAATGAGTGTCGCCAGCTGTAGAACTAACTTCAAATAACGAGCCCT 499171 Query 518091 CAAGAGACAAAAGAGT---TACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 | | | ||| | ||| ||| ||||| ||||| | || || || || || | Sbjct 499172 CGGAAATCTGAAGTATGGATACGTCAAATGTTCCTCCACCAAGGTCGAATATGAGGACGT 499231 Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 || ||||| | | | |||||| |||||||| |||| ||||| || || ||||| | Sbjct 499232 TCTTTTCTCCTTTCAGTTCTTTATCTAGACCATAGGCAAGTGCAGCGGCTGTAGGTTCGT 499291 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 |||||||||| | |||||| || | || || ||| ||||| || || ||||||| || Sbjct 499292 TAATAATTCTAAGAACATTTAGCGCGGCTATAGCTCCAGCATCCTTCGTTGCTTGTCGTT 499351 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | | ||| || |||||||| || || || || || ||||| | || || | || Sbjct 499352 GCGCATCATTGAAATATGCTGGGACGGTTATCACAGCATCTTTGACAATACCCCCGAGAT 499411 Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGA 518385 | | || ||| |||||||| ||||| ||| || ||||||| ||| | | || Sbjct 499412 ATGTTTCAGCTATTTCCTTCATTTTTGATAAAACCATGGAGGAAATTTCTTCCGGAGTGA 499471 Query 518386 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445 || |||| | | |||| ||| || ||| | ||| || ||| | || Sbjct 499472 AT-TTGCGTTTCTCTCCTTTG-TATTCAACAACAATCTTTGGGTTTCCCCCATCTGATAT 499529 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 |||| |||||||||| | |||||||| |||| | |||||||||| | ||| || Sbjct 499530 TACTTCAAATGGCCAGAGTCTCATATCTTGCTGAATTTTGGGGTCATTAAATTTTCTTCC 499589 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC 518550 ||||| ||||||||||| || | || || | || || ||||| Sbjct 499590 TATTAAACGTTTTGCATCGAACACTGTGTTTTTAGGGTTCATTGC 499634 Score = 172 bits (190), Expect = 4e-37 Identities = 503/765 (66%), Gaps = 15/765 (2%) Strand=Plus/Plus Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 517854 ||| || ||||||||||||||||||||||| ||||| || | | || |||| Sbjct 512175 TCTGAATAAGTCTGAACAAAGTTCTTCGAAGCGTGCTCTCGTGATCTTAGAATAGAAATC 512234 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 || ||||| || | || ||||| | | | || || ||| || | || || Sbjct 512235 TATGCCTTCATGTAATGCGTCTACTTCTAAACTCGCTTCGGTATTAGAGGACAATGTTCG 512294 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-GATTCAA-A 517972 |||||| | || || || || ||||| |||| || ||||||| |||| |||| || | Sbjct 512295 TTTAGCCCTCTCGCAAGCAGTTCTTAGCCTTCTCAAAGCTTTTG--GATTAGATTTAATA 512352 Query 517973 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAA 518030 || | || || ||||||| || || | | | | ||| | || | || ||| | Sbjct 512353 TCCTTCTTGTACTTTCTCTCAAATTCCTGACAAAA--ATGATCAACCATTCGGCAATCGA 512410 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 ||||||| |||||||| | ||| | || | |||| || |||| || | | | Sbjct 512411 AATCTTCCCCTCCCAAATGAGTGTCGCCAGCTGTAGAACTAACTTCAAATAACGAGCCCT 512470 Query 518091 CAAGAGACAAAAGAGT---TACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 | | | ||| | ||| ||| ||||| ||||| | || || || || || | Sbjct 512471 CGGAAATCTGAAGTATGGATACGTCAAATGTTCCTCCACCAAGGTCGAATATGAGGACGT 512530 Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 || ||||| | | | |||||| |||||||| |||| ||||| || || ||||| | Sbjct 512531 TCTTTTCTCCTTTCAGTTCTTTATCTAGACCATAGGCAAGTGCAGCGGCTGTAGGTTCGT 512590 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 |||||||||| | |||||| || | || || ||| ||||| || || ||||||| || Sbjct 512591 TAATAATTCTAAGAACATTTAGCGCGGCTATAGCTCCAGCATCCTTCGTTGCTTGTCGTT 512650 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | | ||| || |||||||| || || || || || ||||| | || || | || Sbjct 512651 GCGCATCATTGAAATATGCTGGGACGGTTATCACAGCATCTTTGACAATACCCCCGAGAT 512710 Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGA 518385 | | || ||| |||||||| ||||| ||| || ||||||| ||| | | || Sbjct 512711 ATGTTTCAGCTATTTCCTTCATTTTTGATAAAACCATGGAGGAAATTTCTTCCGGAGTGA 512770 Query 518386 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445 || |||| | | |||| ||| || ||| | ||| || ||| | || Sbjct 512771 AT-TTGCGTTTCTCTCCTTTG-TATTCAACAACAATCTTTGGGTTTCCCCCATCTGATAT 512828 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 |||| |||||||||| | |||||||| |||| | |||||||||| | ||| || Sbjct 512829 TACTTCAAATGGCCAGAGTCTCATATCTTGCTGAATTTTGGGGTCATTAAATTTTCTTCC 512888 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC 518550 ||||| ||||||||||| || | || || | || || ||||| Sbjct 512889 TATTAAACGTTTTGCATCGAACACTGTGTTTTTAGGGTTCATTGC 512933 >seq36 Length=956708 Score = 134 bits (148), Expect = 1e-25 Identities = 417/635 (66%), Gaps = 18/635 (3%) Strand=Plus/Minus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 ||||| |||||||||||||| | ||| | || ||||| ||||| ||| | || Sbjct 882991 TCAAAGTCTTCACCTCCCAAGTGAGTGTCACCATTTGTAGCGACTACTTCGAATACACCG 882932 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 | || | | | ||||| || || ||| ||||| |||| ||||| | | |||| Sbjct 882931 TTGTCGATGGTAAGAAGAGACACGTCGAAGGTACCACCGCCCAAGTCAAATACCAATACA 882872 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 ||| |||| ||| || || |||||||| || || | || || || || || ||| Sbjct 882871 TTCTTTTC---ACCTTCTTTCTTGTCAAGACCGTAAGCGATGGCTGCCGCCGTGGGCTCA 882815 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 || || ||||||| ||| ||||| || || || || || ||||| |||||||| | Sbjct 882814 TTGATGATTCTCATAACGTTAAGTCCTGCGATGACACCGGCGTCTTTGGTGGCTTGACGC 882755 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 || | ||||| || || || || || |||| ||||| | || || | ||||| | Sbjct 882754 TGGGCGTCGTTGAAGTAAGCTGGTACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGG 882695 Query 518327 TAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG--G 518384 ||||| || |||| |||||||| | | | ||| | || |||| ||| ||| | Sbjct 882694 TAAGCTTCAGCAGTTTCCTTCATTTTGGTGAGTACCATAGCGGAGATTTCTTCGGGGGCG 882635 Query 518385 AATATTGCTTGGATTCATTTTGATA--TGAT-ACTTCAAAATATGGTTTATTACCAACAT 518441 |||||| || ||| |||| | | || || || || ||||| | | Sbjct 882634 AATATT--TT---ATCACCTTGAGAGGTCATAACGGAAACATGAGGTTTGCTGTTCTTTT 882580 Query 518442 TAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTC 518501 | ||| || || || || |||| | ||| || ||| | |||| | | || | Sbjct 882579 CGACAACCTTGAAGGGGAAGAATTTAACATCGTGCTGGACAGTGCTGTCACTCCATTCAC 882520 Query 518502 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG-CAGCTTGATAT 518560 ||| || | || || || || || | || || || || ||| ||| ||||| | Sbjct 882519 GACCGATAAGACGCTTGGCGTCGAAGACTGTGTTTTCGGGGTTCGTTGTCAG-TTGATTT 882461 Query 518561 TTGGCTGCATCTCCAATCAGATGTTCT--GTC-TCTGTAAATGAAACATATGATGGAGTT 518617 ||||| ||||||||||| ||| ||||| ||| |||| || | || ||||| || || Sbjct 882460 TTGGCAGCATCTCCAATAAGACGTTCTCCGTCGGCTGTGAAGGCTACGTATGAGGGCGTG 882401 Query 518618 GTGCGATTACCTTGATCATTCGCAATAATTTCAAC 518652 | || ||||| || || || ||||| |||||||| Sbjct 882400 ATACGGTTACCCTGGTCGTTGGCAATGATTTCAAC 882366 >seq105 Length=543808 Score = 123 bits (136), Expect = 2e-22 Identities = 134/175 (77%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 870797 ATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGA 870856 || ||||| || | |||||| ||||||||||| |||||||||||| | ||||||||||| Sbjct 267182 ATAATTGTAGACTTTTCTTCACCAAATATTGCAAAAGAAATGCATGTAGGACATTTAAGG 267123 Query 870857 TCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGAC-ACGATGTTTA 870915 || |||||||| || || ||||||| ||| || || | | ||||| | |||||| Sbjct 267122 TCGACTATTATAGGAGATAGTATTTGTCGGGCCTTGGAGTT-TCTGGACCATGATGTTCT 267064 Query 870916 TCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 870970 || | || ||| | ||||| ||||||||||| || || ||| | |||||| || Sbjct 267063 CCGCTTAAACCATCTTGGTGACTGGGGAACTCAGTTTGGAATGCTCATTGCTCAT 267009 >seq218 Length=432465 Score = 109 bits (120), Expect = 4e-18 Identities = 394/605 (65%), Gaps = 16/605 (3%) Strand=Plus/Plus Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT---GGTTTTTATC 518172 ||| || || || | ||| || || | || ||| |||| | ||| |||| || || Sbjct 297054 GGTGCCGCCGCCGAGATCGAAGATTAACACGTTCCTTTC---GCCTTTGAGGTTCTTGTC 297110 Query 518173 AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC 518232 || || || || | || || || || || || || || || | || ||| || ||||| Sbjct 297111 CAGGCCGTAGGCGAGTGCGGCGGCTGTGGGCTCGTTGATGATGCGCAGAACGTTCAGACC 297170 Query 518233 AGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 518292 || || ||| ||||| || || ||||| | || || ||||| || || || ||||| Sbjct 297171 TGCGATCGCTCCGGCATCCTTCGTCGCTTGACGCTGGGAGTCGTTGAAGTAAGCCGGAAC 297230 Query 518293 AGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 || | ||||| || || | |||| | ||| || || || | ||||| || Sbjct 297231 TGTGACTACGGCGTCGCGGACCGTTGTACCGAGATACGCCTCCGCGGTCTCCTTCATCTT 297290 Query 518353 ACTTAAAATCAT--TGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATT-TTGATA 518409 || | ||| || ||| ||| || |||| || ||| | || |||| Sbjct 297291 GACCAACACCATGCTGCTGA--TTTCCTCGGGGGCGAATCTCTTCGTCTCGCCCTTGAAC 297348 Query 518410 TGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCAT 518469 | |||| | | ||||| ||| | || | ||||| || ||||||| ||||| Sbjct 297349 TCC-ACTTGGATTTTCGGTTTGCTACAGTCGTTGACCACTTTGAAGGGCCAGTGCTTCAT 297407 Query 518470 ATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAA 518528 || | ||| | ||| || |||| || | | || ||||| ||||| || || || | Sbjct 297408 GTCGGCTTGTAT-CTTAGGATCATCGAATTTGCGGCCGATTAACCGTTTCGCGTCGAAGA 297466 Query 518529 TAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT-TCT 518587 || ||| | || || | || | || | || || || || || |||| || | || Sbjct 297467 CTGTGTTGTTGGGGTTCAGGGCCACCTGGTTCTTAGCAGCGTCGCCGATCA-ATCTCTCC 297525 Query 518588 GTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATT 518647 || ||||| |||| || || || ||||| || | || ||||| || || || || ||| Sbjct 297526 GTATCTGTGAATGCGACGTAAGACGGAGTCGTCCTGTTGCCTTGGTCGTTTGCGATGATT 297585 Query 518648 TCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 518707 || || || |||| |||||| ||||| || || ||||||| || | |||||||||| Sbjct 297586 TCGACATTTCCATGTTGCCAAACACCAACGCAGGAGTAAGTTGTACCGAGATCAATACCA 297645 Query 518708 ATAGC 518712 ||||| Sbjct 297646 ATAGC 297650 Score = 105 bits (116), Expect = 5e-17 Identities = 393/605 (65%), Gaps = 16/605 (3%) Strand=Plus/Plus Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT---GGTTTTTATC 518172 ||| || || || | |||||| || | || ||| ||| | ||| |||| || || Sbjct 307506 GGTGCCGCCGCCGAGATCAAAGATTAACACGTTCCGTTC---GCCTTTGAGGTTCTTGTC 307562 Query 518173 AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC 518232 || || || |||| || || || || || || || || || | | ||| || ||||| Sbjct 307563 CAGGCCGTAGGCAAGTGCGGCGGCTGTGGGCTCGTTGATGATGCGGAGAACGTTCAGACC 307622 Query 518233 AGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 518292 || || ||| ||||| || || ||||| | || || ||||| || || || ||||| Sbjct 307623 TGCGATCGCTCCGGCATCCTTCGTCGCTTGACGCTGGGAGTCGTTGAAGTAAGCCGGAAC 307682 Query 518293 AGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 || | || || || || | |||| | ||| || || || | ||||| || Sbjct 307683 TGTGACTACAGCGTCGCGAACCGTTGTACCGAGATACGCCTCCGCGGTCTCCTTCATCTT 307742 Query 518353 ACTTAAAATCAT--TGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATT-TTGATA 518409 || | ||| || ||| ||| || |||| || ||| | || |||| Sbjct 307743 GACCAACACCATGCTGCTGA--TTTCCTCGGGGGCGAATCTCTTCGTCTCGCCCTTGAAC 307800 Query 518410 TGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCAT 518469 | |||| | | ||||| ||| | || | ||||| || ||||||| ||||| Sbjct 307801 TCC-ACTTGGATTTTCGGTTTGCTACAGTCGTTGACCACTTTGAAGGGCCAGTGCTTCAT 307859 Query 518470 ATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAA 518528 || | ||| | ||| || |||| || | | || ||||| ||||| || || || | Sbjct 307860 GTCGGCTTGTAT-CTTAGGATCATCGAATTTGCGGCCGATTAACCGTTTCGCGTCGAAGA 307918 Query 518529 TAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT-TCT 518587 || ||| | || || | || | || | || || || || || |||| || | || Sbjct 307919 CTGTGTTGTTGGGGTTCAGGGCCACCTGGTTCTTAGCAGCGTCGCCGATCA-ATCTCTCC 307977 Query 518588 GTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATT 518647 || ||||| |||| || || || ||||| || | || ||||| || || || || ||| Sbjct 307978 GTATCTGTGAATGCGACGTAAGACGGAGTCGTCCTGTTGCCTTGGTCGTTTGCGATGATT 308037 Query 518648 TCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 518707 || || || |||| |||||| ||||| || || ||||||| || | |||||||||| Sbjct 308038 TCGACATTTCCATGTTGCCAAACACCAACGCAGGAGTAAGTTGTACCGAGATCAATACCA 308097 Query 518708 ATAGC 518712 ||||| Sbjct 308098 ATAGC 308102 Score = 104 bits (114), Expect = 2e-16 Identities = 187/268 (70%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACC 518505 ||||| || ||||||| ||||| || | ||| | ||| || |||| || | | || Sbjct 286910 ACTTTGAAGGGCCAGTGCTTCATGTCGGCTTGTAT-CTTAGGATCATCGAATTTGCGGCC 286852 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||||| ||||| || || || | || ||| | || || | || | || | || || Sbjct 286851 GATTAACCGTTTCGCGTCGAAGACTGTGTTGTTGGGGTTCAGGGCCACCTGGTTCTTAGC 286792 Query 518566 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 || || || |||| || | || || ||||| |||| || || || ||||| || | | Sbjct 286791 AGCGTCGCCGATCA-ATCTCTCCGTATCTGTGAATGCGACGTAAGACGGAGTCGTCCTGT 286733 Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 518684 | ||||| || || || || ||||| || || |||| |||||| ||||| || || Sbjct 286732 TGCCTTGGTCGTTTGCGATGATTTCGACATTTCCATGTTGCCAAACACCAACGCAGGAGT 286673 Query 518685 AAGTTGTTCCTAAATCAATACCAATAGC 518712 ||||||| || | ||||||||||||||| Sbjct 286672 AAGTTGTACCGAGATCAATACCAATAGC 286645 >seq26 Length=1171277 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 366997 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 367056 ||||| ||| | || ||||||||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct 842513 GTAGCTACAGTGGCTTTTGGTATGGGAATTGATAAACCGGATGTAAGATTTGTTATACAT 842572 Query 367057 TATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 367116 || | || ||| ||| |||||||||||| | ||||||||| || | ||| Sbjct 842573 CATACAATAAGTAAATCTATGGAAAATTATTATCAAGAGAGTGGTAGAGCTGGAAGAGAT 842632 Query 367117 GG 367118 || Sbjct 842633 GG 842634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780554682328870