Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq12 289 2e-72 seq17 230 2e-54 seq221 149 4e-30 seq218 149 4e-30 seq13 141 6e-28 seq219 98.7 6e-15 seq64 96.9 2e-14 seq196 95.1 8e-14 seq10 91.5 1e-12 seq105 86.0 4e-11 >seq12 Length=1364364 Score = 289 bits (320), Expect = 2e-72 Identities = 425/594 (72%), Gaps = 8/594 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || ||||||||||| ||||| ||| || | ||| |||||| ||||||| Sbjct 961799 GCAATCGGAATAGATTTAGGAACGACTTATTCTTGCGTCGGTGTATGGCAACATGGTAAT 961858 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || || || || |||||||||||||||||||| || ||||| | ||||| Sbjct 961859 GTAGATATTATAGCTAACGATCAAGGTAATAGAACAACACCTTCTTATGTAGCGTTTACG 961918 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| || || ||||| ||||| ||| | || | || ||| || |||||| Sbjct 961919 GACACCGAACGCCTCATCGGAGACGCTGCCAAAAACCAGGTCGCTCTTAACCCCGTTAAT 961978 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || || ||||| || ||| | | || || | || ||||||||| | | |||| Sbjct 961979 ACAATCTTTGACGCAAAACGTCTCATAGGCAGAAAGTTTGATGATCCTAAGATCCAGCAA 962038 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCA 474628 ||| | || |||||||| || || || || | || ||||||| | ||| ||| | Sbjct 962039 GATCTCAAACACTGGCCTTTCAAAGTCATTAACGAGGGCAGTAAACCGAAGATACAAGTA 962098 Query 474629 A--TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | || | | || || || |||| ||| |||| ||| | || | |||||| | Sbjct 962099 ACTTATAAG--GGCGAGACCAAACGTTTTGCACCCGAAGAGATCAGTAGCATGGTTCTGA 962156 Query 474687 CCAAAATGAAACAAACCG-CGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 | ||||||||| | || | |||| ||||||| ||| | ||| | |||| || || Sbjct 962157 CGAAAATGAAAGATACGGCCGAG-GCATATCTGGGAAGATCAGTCAAAAATGCTGTCATA 962215 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || ||||| ||||| || ||||| |||||||| || ||| ||| Sbjct 962216 ACGGTCCCAGCTTACTTCAATGACTCTCAGCGCCAAGCTACTAAAGACGCAGGAGCAATC 962275 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || || ||||| | ||||| || || |||||||| ||||| || ||||||||||| Sbjct 962276 GCTGGCCTCAATGTCCTCCGTATCATCAACGAACCAACTGCAGCTGCCCTTGCTTATGGG 962335 Query 474866 CTTGATAAGAATTCTGACA-AAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 || ||||| || ||||| | ||| ||||||| |||| || ||| |||||| Sbjct 962336 CTGGATAA-AAATCTGAAAGGGGAAAGAAATGTTCTAATTTTCGATCTTGGAGG 962388 >seq17 Length=1813267 Score = 230 bits (254), Expect = 2e-54 Identities = 385/552 (70%), Gaps = 6/552 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 |||||||| || ||| | |||||||| || ||||| | || |||||| |||| || Sbjct 1128478 GCAATTGGAATCGATCTTGGAACTACGTATTCATGTGTCGGAGTATGGCAACATGGAAAT 1128419 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || |||||||| || || |||||||| || | || || ||||| || || | |||||| Sbjct 1128418 GTGGAAATAATCGCTAACGACCAAGGCAACCGGACCACTCCATCTTACGTCGCATTTACT 1128359 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| | |||||||||||||| ||| |||||| |||| || || || Sbjct 1128358 GACACGGAACGCTTAATTGGAGATGCTGCCAAAAATCAAGTAGCATTAAACCCCAACAAC 1128299 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || ||||| || |||| || || || || ||||| || | | | ||| Sbjct 1128298 ACGGTATTCGATGCCAAGCGATTAATAGGCCGCAAGTTTGACGACCCAAAGATACAACAG 1128239 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AGAAG 474626 ||||||| ||||||||||| || || || |||| | || |||||| | || || | Sbjct 1128238 GATATGCAACATTGGCCTTTCAAAGTCATCAATGACTGCGGCAAACCAAAGATTCAGGTG 1128179 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 ||| || |||||||| ||||| || |||| ||| | || | ||||| || Sbjct 1128178 GAATTCA--AAGGTGAAATTAAACGGTTCGCACCAGAAGAGATAAGTAGCATGGTATTGA 1128121 Query 474687 CCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCAGTAATT 474745 | || |||||| |||| || | | | | || | || | || || || || || Sbjct 1128120 CTAAGATGAAAGAAACTGCTGAAGCGTTTTTAGGCTCCAGCA-TACGAGACGCCGTGATC 1128062 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || ||||| ||||| || || || ||||| || || |||||||||||| | || Sbjct 1128061 ACAGTGCCCGCATACTTTAACGACTCCCAGCGTCAGGCCACCAAAGATGCGGGAGGTATA 1128002 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || | ||||||||||| || || |||||||| || || || || | || |||||| Sbjct 1128001 GCTGGAATAAATGTTTTACGAATAATCAATGAACCTACTGCTGCTGCTTTGGCGTATGGT 1127942 Query 474866 CTTGATAAGAAT 474877 || ||||| ||| Sbjct 1127941 CTGGATAAAAAT 1127930 Score = 129 bits (142), Expect = 4e-24 Identities = 429/661 (65%), Gaps = 10/661 (2%) Strand=Plus/Minus Query 475511 GCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAA 475570 ||||| || | ||||| ||| || || | ||| | ||| ||||| | || |||| Sbjct 1127683 GCTAAACGCACACTTTCCTCTAGCACGGAAGCCACTTTGGAAATTGATGCACTACATGAA 1127624 Query 475571 GGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTC 475630 || || || | | | |||| | | | |||| ||||||||| | ||||| | Sbjct 1127623 GGCATCGACTTTTACACTCGAGTCTCTCGAGCTAGATTTGAAGAATTAAACTCTGACTTA 1127564 Query 475631 TTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAA--T 475688 || | ||| | ||||| || ||| | | | | | ||| | || ||||||||| | Sbjct 1127563 TTCCGTGGAACGTTGGAACCGGTCGAAAAGGCTTTGAAGGATGCCAAGCTTGACAAAAGT 1127504 Query 475689 CACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAA 475748 || | ||||| | || || || |||||||| || | ||||| || || | | | Sbjct 1127503 TCCA--TTCATGATGTGGTCCTCGTCGGAGGTTCTACTCGTATTCCGAAGATTCAAAACA 1127446 Query 475749 TGCTTTC-ATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCT 475807 ||||| | | | || | ||| ||||| |||||| | || ||||| || || Sbjct 1127445 TGCTTCAGAACTTCTTCTG-TGGCAAAAAATTAAATCTCTCCATCAACCCTGACGAGGCG 1127387 Query 475808 GTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTA 475867 || || || ||||| || || ||||| || || || ||| || | || ||| | Sbjct 1127386 GTCGCTTACGGAGCGGCGGTGCAAGCGGCCATCCTAAGCGGTGAACAACACAGTAAAATC 1127327 Query 475868 AATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGG 475927 | | || | | || ||||| | || || || || || | ||||||| |||||| Sbjct 1127326 CAAGACGTTCTGTTGGTGGACGTGGCGCCTCTGTCTTTGGGCATCGAAACAGCTGGAGGA 1127267 Query 475928 ATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAA--AAAATCAAAAGTAT 475985 | ||||| || | || || ||||| || || |||||||| ||| ||||| | Sbjct 1127266 GTCATGACGAAGATCATCGAACGAAATGCTAAAATACCATGCAAGCAAAGTCAAACCT-- 1127209 Query 475986 TTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAA 476045 | | || ||||||||||| ||| | | || ||||| || | | ||||||||||| Sbjct 1127208 TCACTACATATTCTGATAACCAACCCGCCGTCACCATACAGGTGTACGAAGGTGAAAGGG 1127149 Query 476046 AATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTC 476105 | || ||||| ||||| | | || ||| |||| |||||||| || || | Sbjct 1127148 CTATGACCAAAGACAATAATCTATTAGGTCGTTTCGATCTGACGGGTATTCCACCAGCAC 1127089 Query 476106 CCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATG 476165 | |||| |||||| |||| || || ||||| ||| | ||||| ||||| || | |||| Sbjct 1127088 CTCGAGGTGTTCCTAAAATAGATGTAACTTTCGATCTCGATGCTAATGGAATCTTGAATG 1127029 Query 476166 T 476166 | Sbjct 1127028 T 1127028 >seq221 Length=486136 Score = 149 bits (164), Expect = 4e-30 Identities = 226/316 (72%), Gaps = 22/316 (7%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 ||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||| Sbjct 12484 GTTTTTGATTGTTGGTTTGAATCAGGTTCTATGCCCTATGCTCAAAATCATTATCCATTT 12543 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAG---ATTTTATAACAGAA 297438 ||||| | ||| ||| | || | | || | || ||| | ||||| | ||| Sbjct 12544 GAAAA---CAAAA---AAGA-ATTTGATGAAAT--TTTTCCAGCTAACTTTATTGCGGAA 12594 Query 297439 TCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTT 297498 || || ||||||||||| ||||||||||| || | || | || || ||| ||||| Sbjct 12595 GGTATAGACCAAACAAGAGGATGGTTTTATACACTAATTGTGTTGTCAACGGCTTTATTT 12654 Query 297499 AACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAA 297558 || ||||| | ||||| ||| | || | || || | || ||| ||||||| ||| Sbjct 12655 AATAAACCCCCCTTTAAGAATTTGATCGCTAACGGTCTAATTCTAGCATCTGATGGGCAA 12714 Query 297559 AAAATGTCAAAAAGTAAAGGTAATTATCCTGATCCAAATATTTTGA---TGGA--TAAAT 297613 || ||||| || || || |||||||| ||||| ||| || || | ||| | Sbjct 12715 AAGATGTCCAAGAGAAAGAAGAATTATCCAGATCC-----TTTAGAAGTTGTATCTAAGT 12769 Query 297614 ATGGTGCAGATACTTT 297629 ||||||| ||| |||| Sbjct 12770 ATGGTGCTGATGCTTT 12785 Score = 102 bits (112), Expect = 5e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| ||||| ||||| |||||| ||| || | || || || | ||||| Sbjct 79033 ACGCAGACGTAGTACGAGATGGAGTGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGT 79092 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | ||| || ||||| ||||| | |||||||||||| || || || || Sbjct 79093 ACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATGCC 79152 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| || || || || |||||||||||||| | || | Sbjct 79153 TTCCTTGTCTTGGATTTTAGCCTTCACGTTTTCAATAGTATCAGAAGGCTCTACCTCTAA 79212 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||||||||| || || || ||||| || || || Sbjct 79213 CGTTATAGTTTTACCCGTAAGGGTTTTAACAAAGATCTG 79251 Score = 93.3 bits (102), Expect = 3e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| | ||||||||||| ||| ||||| || || ||||| | ||||| Sbjct 79262 CGAAGACGCAAAACAAGATGAAGAGTAGACTCTTTTTGAATGTTGTAATCGGAAAGAGTA 79321 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | || || | ||| ||||| ||||| || | ||||| ||||| || || ||||| Sbjct 79322 CGTCCGTCCTCCAATTGTTTTCCTGCAAAGATCAATCGTTGCTGATCTGGTGGGATTCCC 79381 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 || ||||||||||| || ||| ||| |||||||||||| Sbjct 79382 TCTTTGTCTTGAATTTTGGCTTTAACATTTTCAATAGTATC 79422 Score = 89.7 bits (98), Expect = 3e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| || ||||| |||||||| || ||||| ||||| || ||||| || ||||||||| Sbjct 78416 TCTTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTG 78475 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 ||||| || ||| || ||| || || || || | | || ||| ||||| || Sbjct 78476 TCTTGGATTTTTGCCTTTACATTCTCTATGGTGTCGGAGGGTTCGACTTCTAGGGTGATG 78535 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || | ||||| ||||| || || Sbjct 78536 GTTTTGCCAGTCAAGGTCTTGACGAAGATCTG 78567 >seq218 Length=432465 Score = 149 bits (164), Expect = 4e-30 Identities = 395/591 (67%), Gaps = 18/591 (3%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || |||||||||||| | || || |||||| || || | |||||||||| |||| || Sbjct 308102 GCTATTGGTATTGATCTCGGTACAACTTACTCCTGCGTTGGTGTTTGGCAACATGGAAAT 308043 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || || |||||||| || || || || || || || || | || || Sbjct 308042 GTCGAAATCATCGCAAACGACCAAGGCAACAGGACGACTCCGTCTTACGTCGCATTCACA 307983 Query 474449 GAAACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || || | || | || || || |||||||| | || | || || || || Sbjct 307982 GATACGGAGAGAT-TGATCGGCGACGCTGCTAAGAACCAGGTGGCCCTGAACCCCAACAA 307924 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | || || || ||| | || || || || || || |||||| | | | ||| | Sbjct 307923 CACAGTCTTCGACGCGAAACGGTTAATCGGCCGCAAATTCGATGATCCTAAGATACAAGC 307864 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 || ||| || ||||| || || ||| | || | || | ||||| | || ||| Sbjct 307863 CGACATGAAGCACTGGCCCTTCAAAGTGGTCAACGACTGTAGCAAACCGAAAATCCAAGT 307804 Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCA--ATGGTTT 474683 | | || | || || || || ||| | || || |||| | || ||||| | Sbjct 307803 GGAGTTCAAG--GGCGAGACGAAGAGATTCGCCCCCGAGGAAAT--CAGCAGCATGGTGT 307748 Query 474684 TAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCAGTA 474742 | | ||| ||||| | |||||| | ||||| || |||| | | || || ||| Sbjct 307747 TGGTCAAGATGAAGGAGACCGCGGAGGCGTATCTCGGTACAACGGTTCGC-GACGCTGTA 307689 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 | || ||||| || || || || || || || |||||||| || || ||||| ||| Sbjct 307688 GTCACAGTTCCGGCTTACTTCAACGACTCCCAGCGTCAAGCGACGAAGGATGCCGGAGCG 307629 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 || |||||||| || ||| | || || || || || || ||||| ||||||||||| || Sbjct 307628 ATCGCAGGTCTGAACGTTCTCCGCATCATCAACGAGCCCACAGCCGCCGCACTTGCCTAC 307569 Query 474863 GGTCTTGATAAGAATTCTGACAAA---GAAGTAAATGTTTTAATCTTTGAT 474910 || || || ||||| || |||| ||| || || |||||||||||| Sbjct 307568 GGCCTGGACAAGAA-CCT--CAAAGGCGAACGGAACGTGTTAATCTTTGAT 307521 >seq13 Length=1808754 Score = 141 bits (156), Expect = 6e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 474651 AATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCT 474710 |||| | |||||| ||||||| || ||||||||| | |||||||| ||| || Sbjct 499474 AATTCACTCCGGAAGAAATTTCCTCCATGGTTTTATCAAAAATGAAGGAAATAGCTGAAA 499415 Query 474711 CATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATT 474770 ||||||| || || | ||||| || || || || ||||||||||| |||||| Sbjct 499414 CATATCTCGGGGGTATTGTCAAAGATGCTGTGATAACCGTCCCAGCATATTTCAATGATG 499355 Query 474771 CTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTA 474830 | ||||| |||||||| || ||||| ||| || || | || |||||| | | |||| Sbjct 499354 CGCAACGACAAGCAACGAAGGATGCTGGAGCTATAGCCGCGCTAAATGTTCTTAGAATTA 499295 Query 474831 TTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 |||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct 499294 TTAACGAACCTACAGCCGCTGCACTTGCCTATGGTCTAGATAA 499252 Score = 141 bits (156), Expect = 6e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 474651 AATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCT 474710 |||| | |||||| ||||||| || ||||||||| | |||||||| ||| || Sbjct 512773 AATTCACTCCGGAAGAAATTTCCTCCATGGTTTTATCAAAAATGAAGGAAATAGCTGAAA 512714 Query 474711 CATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATT 474770 ||||||| || || | ||||| || || || || ||||||||||| |||||| Sbjct 512713 CATATCTCGGGGGTATTGTCAAAGATGCTGTGATAACCGTCCCAGCATATTTCAATGATG 512654 Query 474771 CTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTA 474830 | ||||| |||||||| || ||||| ||| || || | || |||||| | | |||| Sbjct 512653 CGCAACGACAAGCAACGAAGGATGCTGGAGCTATAGCCGCGCTAAATGTTCTTAGAATTA 512594 Query 474831 TTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 |||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct 512593 TTAACGAACCTACAGCCGCTGCACTTGCCTATGGTCTAGATAA 512551 >seq219 Length=603346 Score = 98.7 bits (108), Expect = 6e-15 Identities = 511/799 (64%), Gaps = 45/799 (6%) Strand=Plus/Plus Query 592134 AATATATAGTTTCAAATATTTTCCTATTAAGATCTCGAGCAATATCAGAATCAAATGGAA 592193 |||| || ||||||||||||| | |||||| | || | ||| ||| | || | Sbjct 377788 AATAGATCGTTTCAAATATTTGCTGATTAAGTAATATTGCCTTCTCACTCTCATACGGTA 377847 Query 592194 TTTTAAATATAGCAAACACATCGGCTAATCCTTGTACACCAACGCCAATAGGTCTATGGC 592253 | | | | | |||| |||| |||||||| || || || | ||||| || || || Sbjct 377848 ATCTCATAAGAACAAATGCATCCGCTAATCCCTGAACGCCGATACCAATGGGCCTGTG-- 377905 Query 592254 GTAAATTTGAAACACGTGTTTTT----TC---TACTGGATAATAATTTACATCAATAATA 592306 ||| | | || |||||| || ||| |||||| | || ||||||||||| Sbjct 377906 -----TTTCATATTCGAGTTTTTCGCCTCCGGTACAGGATAAAAGTTGACATCAATAATT 377960 Query 592307 TTATTTAAATTTCTTGTAATAATTCTTGCGACCTTGTACAATTTATTATAATCAAACTCT 592366 || || | |||| ||||| | || | | || | | || ||| || |||| || | | Sbjct 377961 TTGTTCAGATTTTGTGTAACAGTTTTAGTTACTTCTTTCAGTTTTTTGAAATCGAATTTT 378020 Query 592367 GGAACACCGTTTTCATGAATAATAAATTTAGGTAAACAAATTGATGACAAATTACAAACT 592426 ||||||| | || | |||||| | ||||| | | ||| || || Sbjct 378021 ------TTGTTTTCA--ACAAACATATTTAG----AGCTATTGAGGCGAGATTGCACACG 378068 Query 592427 GCATATTCATCTGCAGATGAGAATTCTACAATTTCACAACAAAGATTTGAGCCATTAATT 592486 ||| |||||| | |||| |||| ||||||||| ||| | ||| || || || Sbjct 378069 GCAACCTCATCTTCCGATGTATATTCAACAATTTCAGTACACAAATTACTGCATTTGATA 378128 Query 592487 ACGCCTATATTAATCTGATTTGATTTT-TGATTGATAGCATCTTTAAACAATATGTATGG 592545 || | ||| | ||||| |||| || | || |||||||| ||| |||||||| Sbjct 378129 GTTCCAAGATTTTTTTGATTACTTTTTCTGTTACAT-GCATCTTTGTACAGCATGTATGG 378187 Query 592546 TACACCTGTTTCAATTTGTGTTTCCATTAT---TTTAAACCATAA-ATCTCTTGCTTTGA 592601 ||| ||||| | ||| | ||| || || ||| |||||| |||| || | Sbjct 378188 AGTACCAGTTTCGACTTGCGCTTCAATAATGGCTTT---CCATAATATCT-GAGCGCGTA 378243 Query 592602 TTTGTTTTATAAATCTACCCTCATTTTCATATTTAAGATA-AGCTTTATTAAATTCTTCA 592660 ||| | | |||||| || | ||||||||| ||| | | | | |||||||||| Sbjct 378244 CTTGCCTGACAAATCTGTTTTCTTGTTCATATTTCTCATACAACGCT-TCAAATTCTTCA 378302 Query 592661 CCAT-ATTTTCCTACAATATCTGGACA-TTGTGATGGACACATAAGTGACCAATTTTCAT 592718 || | | || || || ||||||| || || |||||||| || ||||||||||| Sbjct 378303 CCGTAACAATCATA-AAGCCCTGGACAGTTATG-GGGACACATCAGACTCCAATTTTCAT 378360 Query 592719 CTTTTTCAACACGATCCATGAAAATATTATTAATCATTAATCCAAGGAATAAATCTCTGG 592778 | | ||||| | | |||||| | || ||| || || || || ||||||| Sbjct 378361 TTCTCTCAACCCTCTTCATGAACAAATCTGGTATCCATAGAGCATAAAACAATTCTCTGG 378420 Query 592779 CTCTTTCCGTTTCAGCACCAGTATTTTTCTTTAGATCAAGGAAGAAAAATATATCACCAT 592838 | || | ||| || || || ||||||| ||| | || || |||||| || Sbjct 378421 CCCTCACTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAAAAACTCGAAGATATCAGAAT 378480 Query 592839 GCCAAGGTTCAATAAATACCGCAAATGAACCAGCTCTTTTA---CCACCTTGATTCGCAT 592895 |||| || || | | | | || |||| || | | |||| || ||||||| ||| Sbjct 378481 GCCACGGCTCCACATAGATGGCGAATGCTCCCGGACGTTTATTGCCCCCTTGATCAACAT 378540 Query 592896 ATCTGGCTATGTCATTATA 592914 |||| ||| ||| |||||| Sbjct 378541 ATCTTGCTGTGTTATTATA 378559 >seq64 Length=1946208 Score = 96.9 bits (106), Expect = 2e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 |||||||| | ||| ||| || || ||| || || | || || | |||||| Sbjct 785719 ACAAGATGCAAGGTAGATTCCTTTTGAATATTGTAGTCGGATAAGGTACGACCATCTTCC 785778 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 | ||| |||||||| || || | || || ||||| || ||||| |||||||||||||| Sbjct 785779 AATTGTTTTCCAGCGAATATCAATCGCTGCTGATCTGGTGGAATACCTTCCTTGTCTTGG 785838 Query 480684 ATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 ||||| || ||| || || || |||| | | || |||||||| |||||| Sbjct 785839 ATCTTGGCCTTTACATTCTCGATGGTGTCAGAGGCCTCAACCTCTAGGGTAATGGTTTTA 785898 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || |||||||||||||| || Sbjct 785899 CCCGTTAGGGTCTTAACGAAAATCTG 785924 >seq196 Length=822064 Score = 95.1 bits (104), Expect = 8e-14 Identities = 243/363 (67%), Gaps = 8/363 (2%) Strand=Plus/Plus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| ||| || | ||||| || || || || || || || ||| |||| ||| Sbjct 693521 GATGCCAAACGACTCATTGGCCGCAAGTTCGAGGACCTTACAGTGCAAGCTGACATGAAA 693580 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAATACACG 474635 || ||||| || | ||||| | || ||| || |||||| || | | ||||||| Sbjct 693581 CACTGGCCATTCGAAGTGATCAGTGATGGAGGCAAACCAATGATCAAGGTACAATACAA- 693639 Query 474636 CAGGTGAA-ACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATG 474694 ||| ||| || | || | ||| || || || | || ||||| | | || ||| Sbjct 693640 -AGGAGAAGACAAGACTTTCTTC-CCTGAGGAAGTGAGCTCGATGGTGCTCACAAAGATG 693697 Query 474695 AAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCC 474753 || |||| || ||| | || || || || || ||||||| || || ||||| Sbjct 693698 AAGGAAACAGCCGAGG-CTTACCTCGGCAAAACGGTGCAAAATGCAGTTATAACGGTTCC 693756 Query 474754 AGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCT 474813 ||| || || || || || || || || || || ||||||||||| | || | || || Sbjct 693757 AGCGTACTTCAACGACTCACAGCGACAGGCCACGAAAGATGCGGGTACCATCTCTGGCCT 693816 Query 474814 TAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 || ||| | ||||| || || ||||| || || || || |||| || |||||||| || Sbjct 693817 GAACGTTCTCCGTATCATCAACGAACCGACCGCTGCTGCGATTGCCTACGGTCTTGACAA 693876 Query 474874 GAA 474876 ||| Sbjct 693877 GAA 693879 >seq10 Length=3673010 Score = 91.5 bits (100), Expect = 1e-12 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 321774 AATGTAAGATTTTTTGCAATAATTAATGGTAAACCAACTTCATTCA-GTGCAATATTTGG 321832 ||||| | ||||| ||||||| | ||| | || |||| | | | |||| ||| || Sbjct 2025403 AATGTCAAATTTTGTGCAATAGATCTTGGGACGCCTACTTGGTCAATGCGCAA-ATTAGG 2025461 Query 321833 ATCAGATGTGATAACTGTACGACCAGACATATCAACACGTTTACCCATAAGATTTCCTCT 321892 ||||| ||| || ||||| | | | || | |||||||||||| |||||||||||||| | Sbjct 2025462 ATCAGGTGTAATTACTGTTCTAGCTGAGAAATCAACACGTTTTCCCATAAGATTTCCACG 2025521 Query 321893 AATACGACCTTCTTTTCCACGTAATCTTG 321921 ||| | ||||||||| || || ||||| Sbjct 2025522 AATTCTACCTTCTTTGCCTTTTAGTCTTG 2025550 >seq105 Length=543808 Score = 86.0 bits (94), Expect = 4e-11 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 |||| ||||| || |||||||||||||| ||||||||| | ||||| || || || || | Sbjct 267175 TAGACTTTTCTTCACCAAATATTGCAAAAGAAATGCATGTAGGACATTTAAGGTCGACTA 267116 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGA-TGTGAAGTACAAAGAATA 817216 | || || || | ||||| | | || | ||| |||| ||| || | | || Sbjct 267115 TTATAGGAGATAGTATTTGTCGGGCCT-TGGAGTTTCTGGACCATGATGTTCTCCGCTTA 267057 Query 817217 AATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 || ||| ||||||| |||||||| || ||||| ||| | ||||| Sbjct 267056 AACCATCTTGGTGACTGGGGAACTCAGTTTGGAATGCTCATTGC 267013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267947782273460