Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq219 98.7 5e-16 >seq219 Length=603346 Score = 98.7 bits (108), Expect = 5e-16 Identities = 114/152 (75%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAGTGAATGGTTCAAAACAT 25072 ||| |||||||||||||||| ||| ||| ||| |||||| || || |||||||| || Sbjct 377495 AAACTCTCCAGACAAAACTCGTCT--TTGGTAAATGTTTGATGTAAAAGGTTCAAACGAT 377552 Query 25073 TCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAA 25132 ||||||||||||| ||||||| || || || || |||||| |||| || || ||| Sbjct 377553 TCATTATTTCCTAGTATTTGAGCGGTGGAGGCAGTGGGCATTGGCGCTAATAGAAGGGAA 377612 Query 25133 TTTCTCAAACCATATTTAACAATCTCTTGTTT 25164 || | | ||||| || |||| | || ||| Sbjct 377613 TTACGAAGACCATGCTTTGCAATTTTTTCTTT 377644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253023362224625