Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq131 102 5e-17 seq221 98.7 6e-16 >seq131 Length=856804 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| || || |||| ||| | ||| ||||| |||||||| || || || Sbjct 308113 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308172 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || | ||||| ||||| ||||| |||| ||||||||| | || Sbjct 308173 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308232 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || ||| || || || |||| || || || | Sbjct 308233 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAAC--ATTCTCGATCGTGTCGGAGGGTTCAA 308290 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || ||||| || | || ||||||||||| ||||| Sbjct 308291 CTTCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308339 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| || || |||| ||| | ||| ||||| |||||||| || || || Sbjct 308341 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308400 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || | ||||| ||||| ||||| |||| ||||||||| | || Sbjct 308401 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308460 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || ||| || || || |||| || || || | Sbjct 308461 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAAC--ATTCTCGATCGTGTCGGAGGGTTCAA 308518 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || ||||| || | || ||||||||||| ||||| Sbjct 308519 CTTCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308567 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| || || |||| ||| | ||| ||||| |||||||| || || || Sbjct 308569 CCTCCTCTCAATCTTAGTACCAAGTGCAGGGTTGATTCCTTTTGAATGTTGTAATCAGAC 308628 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || | ||||| ||||| ||||| |||| ||||||||| | || Sbjct 308629 AGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 308688 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || ||| || || || |||| || || || | Sbjct 308689 ATTCCTTCCTTGTCCTGGATCTTAGCTTTAAC--ATTCTCGATCGTGTCGGAGGGTTCAA 308746 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || ||||| || | || ||||||||||| ||||| Sbjct 308747 CTTCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308795 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||| || | ||| || || || | ||| | ||| ||||| ||||||||||| || || Sbjct 307884 TCCCCCTCGCAATCTTAGTACTAAGTGCAGGGTTGATTCCTTTTGAATGTTATAATCAGA 307943 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| |||| |||| || | ||||| ||||| ||||| |||| ||||||||| | || Sbjct 307944 CAGGGTGCGTCCATCTTCTAACTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGG 308003 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCG 34927 | || |||||||| | || || ||| || || || |||| || || || Sbjct 308004 AATTCCTTCCTTGTCCTGGATCTTAGCTTTAAC--ATTCTCGATCGTGTCGGAGGGTTCA 308061 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || || ||||| || | || ||||||||||| ||||| Sbjct 308062 ACTTCCAAAGTGATCGTTTTTCCAGTTAATGTTTTTACAAAGATTTGCAT 308111 >seq221 Length=486136 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || || | || | || ||||| ||||| || || || Sbjct 78379 CTCCTTCTGGATGTTGTAGTCAGAAAGTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAA 78438 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || || |||||| | || | || |||||||| | |||||| || || Sbjct 78439 GATCAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATTTTTGCCTTTACATT 78498 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 |||| | || || ||||| || | ||| ||||| || || || | |||||| || Sbjct 78499 CTCTATGGTGTCGGAGGGTTCGACTTCTAGGGTGATGGTTTTGCCAGTCAAGGTCTTGAC 78558 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 78559 GAAGATCTGCAT 78570 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || |||||||| || || || || | || | || |||| ||| ||||| || || Sbjct 79291 CTCTTTTTGAATGTTGTAATCGGAAAGAGTACGTCCGTCCTCCAATTGTTTTCCTGCAAA 79350 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||||||||| ||| | || | ||||| ||||| | ||||| ||| || Sbjct 79351 GATCAATCGTTGCTGATCTGGTGGGATTCCCTCTTTGTCTTGAATTTTGGCTTTAACATT 79410 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | ||||| || | |||||||||||||| || || || ||||| Sbjct 79411 TTCAATAGTATCCGAAGGTTCGACTTCCAAAGTTATGGTCTTTCCAGTAAGCGTTTTTAC 79470 Query 34966 AAAGATCTGCAT 34977 ||| |||||||| Sbjct 79471 AAAAATCTGCAT 79482 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || || | || |||| || | ||| || || ||||| Sbjct 79064 TCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAA 79123 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||| || ||| | || | || |||||||| | ||||| || ||| | Sbjct 79124 ATCAAACGTTGTTGATCTGGGGGGATGCCTTCCTTGTCTTGGATTTTAGCCTTCACGTTT 79183 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||| || || | ||||| || || ||||| ||||| || ||| Sbjct 79184 TCAATAGTATCAGAAGGCTCTACCTCTAACGTTATAGTTTTACCCGTAAGGGTTTTAACA 79243 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 79244 AAGATCTGCAT 79254 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || || | || | || ||||| ||||| || || ||| Sbjct 78608 TCCTTCTGGATGTTGTAGTCAGAAAGTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAG 78667 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| || || ||||| | || | || || ||||| | ||||| ||| || || Sbjct 78668 ATCAGACGCTGTTGGTCGGGAGGGATACCTTCTTTGTCTTGGATTTTCGCTTTTAC--AT 78725 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || || | || | ||||| || | ||| ||||| || || || | |||||| | Sbjct 78726 TCTCAATTGTGTCTGAAGGTTCGACTTCTAGGGTGATGGTTTTGCCAGTCAAGGTCTTGA 78785 Query 34965 CAAAGATCTGCAT 34977 | ||||||||||| Sbjct 78786 CGAAGATCTGCAT 78798 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || || | || | || ||||| ||||| || || ||| Sbjct 78836 TCCTTCTGGATGTTGTAGTCAGAAAGTGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAG 78895 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| || || ||||| | || | || || ||||| | ||||| ||| || || Sbjct 78896 ATCAGACGCTGTTGGTCGGGAGGGATACCTTCTTTGTCTTGGATTTTCGCTTTTAC--AT 78953 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || || | || | ||||| || | ||| ||||| || || || | |||||| | Sbjct 78954 TCTCAATTGTGTCTGAAGGTTCGACTTCTAAGGTGATGGTTTTGCCAGTCAAGGTCTTGA 79013 Query 34965 CAAAGATCTGCAT 34977 | ||||||||||| Sbjct 79014 CGAAGATCTGCAT 79026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325671385189505