Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq12 365 3e-95 seq17 295 5e-74 seq13 174 1e-37 seq105 123 2e-22 seq36 116 3e-20 seq218 100 2e-15 >seq12 Length=1364364 Score = 365 bits (404), Expect = 3e-95 Identities = 969/1467 (66%), Gaps = 21/1467 (1%) Strand=Plus/Minus Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 ||| | ||| || | |||||||| || |||||||| || | || || ||||| ||||| Sbjct 963256 GGCTGACACGTTTAATATACCATTAGCGTCCAAATCGAAAGCCACGTCGATTTGTGGGAC 963197 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 | | || || || || || | || ||| ||||| ||| |||||| ||||| Sbjct 963196 GTTCCGTGGCGCTGGAGGTATTCCGGTGAGATCAAAGGTTCCTAGAAGATTATTGTCTTT 963137 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 || | | |||||| ||| ||| ||| || || || | | ||||| || | ||| Sbjct 963136 CGTCATAGCCCTTTCACCTTCGTAAACTTGAATTGTCACGGCTGGCTGATTGTCCGCATA 963077 Query 281605 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 ||| || || | || | ||||| || || | | ||| | || | || ||||| Sbjct 963076 AGTCGTGAAGGTTTGCGAATGCTTACACGGTATCTTCGCGTTACGCTCGACTATTTTGGT 963017 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| | ||||| |||||||| | ||| | ||| | || || ||||| || | | || Sbjct 963016 CATCACCCCACCGGCTGTTTCGATACCCAAAGACAACGGCGTCACATCCACCAACAAAAC 962957 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 281784 | |||| ||| || | | || | ||||| ||||||| || || ||||| Sbjct 962956 GTCCTGAATTTTGGAATGACGCTCCCCGCTCAATATAGCAGCTTGAACCGCGGCCCCATA 962897 Query 281785 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TG 281843 ||||| ||||| || || |||| || || |||||||| || || || || || || Sbjct 962896 AGCAACGGCTTCGTCCGGGTTAATAGACAAGTTGAGTTTTTTCCCGTTAAAGAAGTTCTG 962837 Query 281844 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 281903 || ||| | | | | ||| ||||| || | || || || || || || || || | | Sbjct 962836 CAACAAGCTTTGT-ATCTTCGGAATGCGGGTAGAGCCCCCCACCAAAACGATGTCGTTAA 962778 Query 281904 CCTGTGA---TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAG 281960 || || ||| |||| |||| ||| || ||||||| || || || | Sbjct 962777 --TG-GAGTTTTTGTCCAACTTTGCATCTTTCAACGCTTTTTCTACTGGATCCAATGTTA 962721 Query 281961 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAAT 282020 | | ||||| |||| | |||||||| || ||||| | || || || | | | Sbjct 962720 CGCGGAACAAATCTGCATTCAGTTCTTCAAAACGCGCTCTGGAAATTCTGGAATAAAAGT 962661 Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 282080 |||| || || || |||| ||| | |||||| | | || ||| ||||| | | | Sbjct 962660 CAATGCCCTCAAATAAAGCATCGATTTCAATATTCGCTTCAGTACTGGAAGACAAAGTCC 962601 Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AA 282138 |||||| || || |||||||| || | || || || || | | ||| | | || Sbjct 962600 TTTTAGCGCGCTCCGCAGCTGTCCTAAGACGACGCAATGCCTTCG--GGTTGGTACGCAA 962543 Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 282198 ||| |||| | ||||| || || || ||| | | | |||| || || || || || Sbjct 962542 ATCCTTTTTGTGCTTTCTTTTAAATTCATCAGCCAAAAAGTTTACCAGGCGGTTGTCGAA 962483 Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATC 282255 ||||| || || | | || | ||||| |||||| |||||| ||| || ||| || Sbjct 962482 GTCTTCGCCACCTAGATGTGTGTCTCCTGCTGTAGCTTTTACTTCGAAGAGCGATCCCTC 962423 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 || | | | | || ||| || || || || | ||| ||||| || ||||| Sbjct 962422 GTCGATGTTAAGTATGGAGACGTCAAATGTACCCCCTCCAAGATCGAAAATTAGAACATT 962363 Query 282316 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 |||| | | |||||||| || ||||| |||| ||||| ||||||||||| || Sbjct 962362 TCTTTCCCCTTTCAGATTTTTATCCAGCCCATAAGCAAGGGCAGCTGCAGTTGGTTCGTT 962303 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 || || | | ||||| || ||||| ||| |||||| |||||||| ||||| | || Sbjct 962302 GATGATACGGAGGACATTGAGGCCAGCGATTGCTCCTGCGTCTTTAGTAGCTTGGCGCTG 962243 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATA 282495 || || || || || || || || || || || |||| | | ||| | |||| | ||| Sbjct 962242 AGAGTCATTGAAGTAAGCTGGGACCGTTATGACAGCATTTTTGACTGATCTTCCCAGATA 962183 Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCAT--TGATGAAATTTGTTCTGGAGAA 282553 || || || | ||||||||| | | || ||| | ||| | | ||| || | | Sbjct 962182 TGCCTCGGCCGTATCTTTCATTTTCGTCAGAACCATGCTACTGA--TCTCTTCGGGTGCA 962125 Query 282554 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 282613 | | |||| || | ||| | ||||| | | |||||| | || | ||||| Sbjct 962124 AAACGTTTGGTCTCGCCCTTATAAGTTACTTGTATCTTCGGTTTACTGCCCTCGTTAATG 962065 Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACC 282672 ||||| || ||||| | ||| | |||| || | ||| || |||| ||| | ||| || Sbjct 962064 ACTTTGAAAGGCCAGTGTTTGAGATCTTGCTGGAT-CTTAGGATCATCAAACTTTCTGCC 962006 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 || | |||||||| ||||| || ||||| || |||| || | || | |||||| Sbjct 962005 TATGAGACGTTTTGCGTCAAAGATTGTATTAACGGGGTTAAGAGCGACCTGGTTTTTGGC 961946 Query 282733 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792 || ||||| || || |||| || || ||||| | ||||| || || ||||| | ||| Sbjct 961945 AGCGTCTCCGATGAGGCGTTCGGTGTCCGTAAACGCTACATAAGAAGGTGTTGTTCTATT 961886 Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 282852 ||||||||| || || ||||| || || ||||||| |||||||||||| || ||| | | Sbjct 961885 ACCTTGATCGTTAGCTATAATATCTACATTACCATGTTGCCATACACCGACGCAAGAATA 961826 Query 282853 AGTTGTTCCTAAATCAATACCAATAGC 282879 ||| ||||||||||| || || || || Sbjct 961825 AGTCGTTCCTAAATCTATTCCGATTGC 961799 >seq17 Length=1813267 Score = 295 bits (326), Expect = 5e-74 Identities = 964/1469 (66%), Gaps = 39/1469 (3%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| | || ||||| ||||| | ||| || || || || |||| ||| || |||| Sbjct 1127028 ACATTCAAGATTCCATTAGCATCGAGATCGAAAGTTACATCTATTTTAGGAACACCTCGA 1127087 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 | || ||||| || || || || || || | |||||| ||||| || | Sbjct 1127088 GGTGCTGGTGGAATACCCGTCAGATCGAAACGACCTAATAGATTATTGTCTTTGGTCATA 1127147 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 | |||||| ||| | | || || || || | | ||| ||||| ||||| || || Sbjct 1127148 GCCCTTTCACCTTCGTACACCTGTATGGTGACGGCGGGTTGGTTATCAGAATATGTAGTG 1127207 Query 281612 AATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 || | || ||| || || || ||| | | |||| || || || || ||||| | Sbjct 1127208 AAGGTT-TGACTTTGCTTGCATGGTATTTTAGCATTTCGTTCGATGATCTTCGTCATGAC 1127266 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 || ||||||||||| | || | ||| ||||| | || || || | | || | ||| Sbjct 1127267 TCCTCCAGCTGTTTCGATGCCCAAAGACAGAGGCGCCACGTCCACCAACAGAACGTCTTG 1127326 Query 281731 AAGTTTTTCATCAGTT--TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 281788 | |||| | ||| | ||| || || || ||||| | || || || || || Sbjct 1127327 GA--TTTTACTGTGTTGTTCACCGCTTAGGATGGCCGCTTGCACCGCCGCTCCGTAAGCG 1127384 Query 281789 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAG 281847 || || || ||||| || | | ||||| |||||| ||| ||| || || |||| Sbjct 1127385 ACCGCCTCGTCAGGGTTGATGGAGAGATTTAATTTTTTGCCACAGAAGAAGTTCTGAAGC 1127444 Query 281848 AAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 281907 | ||| | | ||| |||||||||| || ||||| || | || | ||||| | || Sbjct 1127445 ATGTTTTGA-ATCTTCGGAATACGAGTAGAACCTCCGACGAGGACCACATCATGAA--TG 1127501 Query 281908 TGA--TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTA 281965 | ||| || || || | |||| ||| | ||||| || ||||| | || | || | Sbjct 1127502 GAACTTTTGTCAAGCTTGGCATCCTTCAAAGCCTTTTCGACCGGTTCCA-AC--GTTCCA 1127558 Query 281966 ---AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGT-GACATTATAA-T 282020 || ||||| || | |||||| ||| |||||| || ||| | || || || | Sbjct 1127559 CGGAATAAGTCAGAGTTTAATTCTTCAAATCTAGCTCGAG--AGACTCGAGTGTAAAAGT 1127616 Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 282080 | || ||||| | | ||||| ||| | || | || || ||| || |||| | Sbjct 1127617 CGATGCCTTCATGTAGTGCATCAATTTCCAAAGTGGCTTCCGTGCTAGAGGAAAGTGTGC 1127676 Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA- 282139 ||||||| | || ||||| | |||||| || | ||| || ||| | || Sbjct 1127677 GTTTAGCTCTCTCCGCAGCTGTACGTAGTCTACGCAGAGCTCGTGA--ATTACCACGAAG 1127734 Query 282140 -TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCA 282196 || ||||||| || | || || || || | | ||| | || | || || || Sbjct 1127735 ATCCTTTTTATACTTGCGTTTAAATTCAGCAGCTAA--ATGATCGACTAAGCGGTTGTCG 1127792 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA--AAGT-CCA 282253 || ||||||||||||| | || | |||| |||| | || | ||| ||| || Sbjct 1127793 AAGTCTTCACCTCCCAGATGGGTGTCACCTGCTGTAGACTTCACCTCGAACAAAGAGCCT 1127852 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 || || | || | | | ||||| ||| || || || | || || || | ||| Sbjct 1127853 TCATCTATAGTGAGGATGGATACATCGAAGGTGCCGCCTCCGAGGTCGAATATTAATACG 1127912 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 ||| | || | | |||||||| ||||||||||| |||||||||||||| |||||| Sbjct 1127913 TTCCTCTCACCTTTAAGATTTTTATCCAGACCATACGCCAAAGCAGCAGCAGTAGGTTCA 1127972 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || || |||| |||||||| | ||||| || | ||| |||||||| ||||| || | Sbjct 1127973 TTGATTATTCGTAAAACATTTATTCCAGCTATACCTCCCGCATCTTTGGTGGCCTGACGC 1128032 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || || |||||||| ||||| || || || || ||||| ||| || | || | || Sbjct 1128033 TGGGAGTCGTTAAAGTATGCGGGCACTGTGATCACGGCGTCTCGTA-TGCTGGAGCC-TA 1128090 Query 282494 TAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 || ||||| || |||| |||||| ||| | || | ||| || | |||||| | Sbjct 1128091 AAAACGCTTCAGCAGTTTCTTTCATCTTAGTCAATACCATGCTACTTATCTCTTCTGGTG 1128150 Query 282552 AATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 282610 | | || |||| ||||| || || | || | |||||| | |||| Sbjct 1128151 CGAACCGTTTAATTTCACCTTTGA-ATTCCACCTGAATCTTTGGTTTGCCGCAGTCATTG 1128209 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 282670 || ||||| || ||||||| || |||||| ||| | || |||| | ||| | | Sbjct 1128210 ATGACTTTGAAAGGCCAATGTTGCATATCCTGTTGTATCTTTGGGTCGTCAAACTTGCGG 1128269 Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 || |||||||| || ||||| || | || ||| | || || | ||| |||||| |||| Sbjct 1128270 CCTATTAATCGCTTGGCATCGAATACCGTGTTGTTGGGGTTTAATGCTACTTGATTTTTG 1128329 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || ||||||||||| | |||| || || ||||||| || || |||||||| || || Sbjct 1128330 GCAGCATCTCCAATTAAGCGTTCCGTGTCAGTAAATGCGACGTAAGATGGAGTGGTCCGG 1128389 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 || ||||| || || || || ||||| || || |||| ||||||||| || ||||| | Sbjct 1128390 TTGCCTTGGTCGTTAGCGATTATTTCCACATTTCCATGTTGCCATACTCCGACACATGAA 1128449 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || ||||| | ||| || ||||| || Sbjct 1128450 TACGTAGTTCCAAGATCGATTCCAATTGC 1128478 >seq13 Length=1808754 Score = 174 bits (192), Expect = 1e-37 Identities = 489/741 (66%), Gaps = 15/741 (2%) Strand=Plus/Plus Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 ||| || ||||||||||||||||||||||| ||||| || | | || |||| Sbjct 498876 TCTGAATAAGTCTGAACAAAGTTCTTCGAAGCGTGCTCTCGTGATCTTAGAATAGAAATC 498935 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 282081 || ||||| || | || ||||| | | | || || ||| || | || || Sbjct 498936 TATGCCTTCATGTAATGCGTCTACTTCTAAACTCGCTTCGGTATTAGAGGACAATGTTCG 498995 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-GATTCAA-A 282139 |||||| | || || || || ||||| |||| || ||||||| |||| |||| || | Sbjct 498996 TTTAGCCCTCTCGCAAGCAGTTCTTAGCCTTCTCAAAGCTTTTG--GATTAGATTTAATA 499053 Query 282140 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAA 282197 || | || || ||||||| || || | | | | ||| | || | || ||| | Sbjct 499054 TCCTTCTTGTACTTTCTCTCAAATTCCTGACAAAA--ATGATCAACCATTCGGCAATCGA 499111 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 ||||||| |||||||| | ||| | || | |||| || |||| || | | | Sbjct 499112 AATCTTCCCCTCCCAAATGAGTGTCGCCAGCTGTAGAACTAACTTCAAATAACGAGCCCT 499171 Query 282258 CAAGAGACAAAAGAGTA---ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314 | | | ||| | || ||| ||||| ||||| | || || || || || | Sbjct 499172 CGGAAATCTGAAGTATGGATACGTCAAATGTTCCTCCACCAAGGTCGAATATGAGGACGT 499231 Query 282315 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 || ||||| | | | |||||| |||||||| |||| ||||| || || ||||| | Sbjct 499232 TCTTTTCTCCTTTCAGTTCTTTATCTAGACCATAGGCAAGTGCAGCGGCTGTAGGTTCGT 499291 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 |||||||||| | |||||| || | || || ||| ||||| || || ||||||| || Sbjct 499292 TAATAATTCTAAGAACATTTAGCGCGGCTATAGCTCCAGCATCCTTCGTTGCTTGTCGTT 499351 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494 | | ||| || |||||||| || || || || || |||||| | || || | || Sbjct 499352 GCGCATCATTGAAATATGCTGGGACGGTTATCACAGCATCTTTGACAATACCCCCGAGAT 499411 Query 282495 AAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA--GA 282552 | | ||| ||| |||||||| ||||| ||| || ||||||| ||| ||| || Sbjct 499412 ATGTTTCAGCTATTTCCTTCATTTTTGATAAAACCATGGAGGAAATTTCTTCCGGAGTGA 499471 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 || |||| | | |||| ||| || ||| | ||| || ||| | || Sbjct 499472 AT-TTGCGTTTCTCTCCTTTG-TATTCAACAACAATCTTTGGGTTTCCCCCATCTGATAT 499529 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 282672 |||| ||||||||| | |||||||| |||| | |||||||||| | ||| || Sbjct 499530 TACTTCAAATGGCCAGAGTCTCATATCTTGCTGAATTTTGGGGTCATTAAATTTTCTTCC 499589 Query 282673 AATTAATCGTTTTGCATCAAA 282693 ||||| ||||||||||| || Sbjct 499590 TATTAAACGTTTTGCATCGAA 499610 Score = 174 bits (192), Expect = 1e-37 Identities = 489/741 (66%), Gaps = 15/741 (2%) Strand=Plus/Plus Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 ||| || ||||||||||||||||||||||| ||||| || | | || |||| Sbjct 512175 TCTGAATAAGTCTGAACAAAGTTCTTCGAAGCGTGCTCTCGTGATCTTAGAATAGAAATC 512234 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 282081 || ||||| || | || ||||| | | | || || ||| || | || || Sbjct 512235 TATGCCTTCATGTAATGCGTCTACTTCTAAACTCGCTTCGGTATTAGAGGACAATGTTCG 512294 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-GATTCAA-A 282139 |||||| | || || || || ||||| |||| || ||||||| |||| |||| || | Sbjct 512295 TTTAGCCCTCTCGCAAGCAGTTCTTAGCCTTCTCAAAGCTTTTG--GATTAGATTTAATA 512352 Query 282140 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAA 282197 || | || || ||||||| || || | | | | ||| | || | || ||| | Sbjct 512353 TCCTTCTTGTACTTTCTCTCAAATTCCTGACAAAA--ATGATCAACCATTCGGCAATCGA 512410 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 ||||||| |||||||| | ||| | || | |||| || |||| || | | | Sbjct 512411 AATCTTCCCCTCCCAAATGAGTGTCGCCAGCTGTAGAACTAACTTCAAATAACGAGCCCT 512470 Query 282258 CAAGAGACAAAAGAGTA---ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314 | | | ||| | || ||| ||||| ||||| | || || || || || | Sbjct 512471 CGGAAATCTGAAGTATGGATACGTCAAATGTTCCTCCACCAAGGTCGAATATGAGGACGT 512530 Query 282315 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 || ||||| | | | |||||| |||||||| |||| ||||| || || ||||| | Sbjct 512531 TCTTTTCTCCTTTCAGTTCTTTATCTAGACCATAGGCAAGTGCAGCGGCTGTAGGTTCGT 512590 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 |||||||||| | |||||| || | || || ||| ||||| || || ||||||| || Sbjct 512591 TAATAATTCTAAGAACATTTAGCGCGGCTATAGCTCCAGCATCCTTCGTTGCTTGTCGTT 512650 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494 | | ||| || |||||||| || || || || || |||||| | || || | || Sbjct 512651 GCGCATCATTGAAATATGCTGGGACGGTTATCACAGCATCTTTGACAATACCCCCGAGAT 512710 Query 282495 AAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA--GA 282552 | | ||| ||| |||||||| ||||| ||| || ||||||| ||| ||| || Sbjct 512711 ATGTTTCAGCTATTTCCTTCATTTTTGATAAAACCATGGAGGAAATTTCTTCCGGAGTGA 512770 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 || |||| | | |||| ||| || ||| | ||| || ||| | || Sbjct 512771 AT-TTGCGTTTCTCTCCTTTG-TATTCAACAACAATCTTTGGGTTTCCCCCATCTGATAT 512828 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 282672 |||| ||||||||| | |||||||| |||| | |||||||||| | ||| || Sbjct 512829 TACTTCAAATGGCCAGAGTCTCATATCTTGCTGAATTTTGGGGTCATTAAATTTTCTTCC 512888 Query 282673 AATTAATCGTTTTGCATCAAA 282693 ||||| ||||||||||| || Sbjct 512889 TATTAAACGTTTTGCATCGAA 512909 >seq105 Length=543808 Score = 123 bits (136), Expect = 2e-22 Identities = 134/175 (77%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 637120 ATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGA 637179 || ||||| || | |||||| ||||||||||| |||||||||||| | ||||||||||| Sbjct 267182 ATAATTGTAGACTTTTCTTCACCAAATATTGCAAAAGAAATGCATGTAGGACATTTAAGG 267123 Query 637180 TCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGAC-ACGATGTTTA 637238 || |||||||| || || ||||||| ||| || || | | ||||| | |||||| Sbjct 267122 TCGACTATTATAGGAGATAGTATTTGTCGGGCCTTGGAGTT-TCTGGACCATGATGTTCT 267064 Query 637239 TCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 637293 || | || ||| | ||||| ||||||||||| || || ||| | |||||| || Sbjct 267063 CCGCTTAAACCATCTTGGTGACTGGGGAACTCAGTTTGGAATGCTCATTGCTCAT 267009 >seq36 Length=956708 Score = 116 bits (128), Expect = 3e-20 Identities = 413/635 (65%), Gaps = 18/635 (3%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||| |||||||||||||| | ||| | || ||||| ||||| ||| | || Sbjct 882991 TCAAAGTCTTCACCTCCCAAGTGAGTGTCACCATTTGTAGCGACTACTTCGAATACACCG 882932 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | || | | | ||||| || || ||| ||||| |||| ||||| | | |||| Sbjct 882931 TTGTCGATGGTAAGAAGAGACACGTCGAAGGTACCACCGCCCAAGTCAAATACCAATACA 882872 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 ||| |||| ||| || || |||||||| || || | || || || || || ||| Sbjct 882871 TTCTTTTC---ACCTTCTTTCTTGTCAAGACCGTAAGCGATGGCTGCCGCCGTGGGCTCA 882815 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || || ||||||| ||| ||||| || || || || || ||||| |||||||| | Sbjct 882814 TTGATGATTCTCATAACGTTAAGTCCTGCGATGACACCGGCGTCTTTGGTGGCTTGACGC 882755 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || | ||||| || || || || || |||| ||||| | || || | || || | Sbjct 882754 TGGGCGTCGTTGAAGTAAGCTGGTACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGG 882695 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC--TGGAG 282551 ||||| || |||| |||||||| | | | ||| | || |||| ||| || | Sbjct 882694 TAAGCTTCAGCAGTTTCCTTCATTTTGGTGAGTACCATAGCGGAGATTTCTTCGGGGGCG 882635 Query 282552 AATATTGCTTGGATTCATTTTGATA--TGAT-ACTTCAAAATATGGTTTATTACCAACAT 282608 |||||| || ||| |||| | | || || || || ||||| | | Sbjct 882634 AATATT--TT---ATCACCTTGAGAGGTCATAACGGAAACATGAGGTTTGCTGTTCTTTT 882580 Query 282609 TAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTC 282668 | ||| || || || | |||| | ||| || ||| | |||| | | || | Sbjct 882579 CGACAACCTTGAAGGGGAAGAATTTAACATCGTGCTGGACAGTGCTGTCACTCCATTCAC 882520 Query 282669 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTG-CAGCTTGATAT 282727 ||| || | || || || || || | || || || || || ||| ||||| | Sbjct 882519 GACCGATAAGACGCTTGGCGTCGAAGACTGTGTTTTCGGGGTTCGTTGTCAG-TTGATTT 882461 Query 282728 TTGGCTGCATCTCCAATCAGATGTTCT--GTC-TCTGTAAATGAAACATATGATGGAGTT 282784 ||||| ||||||||||| ||| ||||| ||| |||| || | || ||||| || || Sbjct 882460 TTGGCAGCATCTCCAATAAGACGTTCTCCGTCGGCTGTGAAGGCTACGTATGAGGGCGTG 882401 Query 282785 GTGCGATTACCTTGATCATTCGCAATAATTTCAAC 282819 | || ||||| || || || ||||| |||||||| Sbjct 882400 ATACGGTTACCCTGGTCGTTGGCAATGATTTCAAC 882366 >seq218 Length=432465 Score = 100 bits (110), Expect = 2e-15 Identities = 186/268 (69%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACC 282672 ||||| || ||||| | ||||| || | ||| | ||| || |||| || | | || Sbjct 286910 ACTTTGAAGGGCCAGTGCTTCATGTCGGCTTGTAT-CTTAGGATCATCGAATTTGCGGCC 286852 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||||| ||||| || || || | || ||| | || || | || | || | || || Sbjct 286851 GATTAACCGTTTCGCGTCGAAGACTGTGTTGTTGGGGTTCAGGGCCACCTGGTTCTTAGC 286792 Query 282733 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 || || || |||| || | || || ||||| |||| || || || ||||| || | | Sbjct 286791 AGCGTCGCCGATCA-ATCTCTCCGTATCTGTGAATGCGACGTAAGACGGAGTCGTCCTGT 286733 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 | ||||| || || || || ||||| || || |||| |||||| ||||| || || Sbjct 286732 TGCCTTGGTCGTTTGCGATGATTTCGACATTTCCATGTTGCCAAACACCAACGCAGGAGT 286673 Query 282852 AAGTTGTTCCTAAATCAATACCAATAGC 282879 ||||||| || | ||||||||||||||| Sbjct 286672 AAGTTGTACCGAGATCAATACCAATAGC 286645 Score = 100 bits (110), Expect = 2e-15 Identities = 186/268 (69%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACC 282672 ||||| || ||||| | ||||| || | ||| | ||| || |||| || | | || Sbjct 297385 ACTTTGAAGGGCCAGTGCTTCATGTCGGCTTGTAT-CTTAGGATCATCGAATTTGCGGCC 297443 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||||| ||||| || || || | || ||| | || || | || | || | || || Sbjct 297444 GATTAACCGTTTCGCGTCGAAGACTGTGTTGTTGGGGTTCAGGGCCACCTGGTTCTTAGC 297503 Query 282733 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 || || || |||| || | || || ||||| |||| || || || ||||| || | | Sbjct 297504 AGCGTCGCCGATCA-ATCTCTCCGTATCTGTGAATGCGACGTAAGACGGAGTCGTCCTGT 297562 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 | ||||| || || || || ||||| || || |||| |||||| ||||| || || Sbjct 297563 TGCCTTGGTCGTTTGCGATGATTTCGACATTTCCATGTTGCCAAACACCAACGCAGGAGT 297622 Query 282852 AAGTTGTTCCTAAATCAATACCAATAGC 282879 ||||||| || | ||||||||||||||| Sbjct 297623 AAGTTGTACCGAGATCAATACCAATAGC 297650 Score = 100 bits (110), Expect = 2e-15 Identities = 186/268 (69%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACC 282672 ||||| || ||||| | ||||| || | ||| | ||| || |||| || | | || Sbjct 307837 ACTTTGAAGGGCCAGTGCTTCATGTCGGCTTGTAT-CTTAGGATCATCGAATTTGCGGCC 307895 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||||| ||||| || || || | || ||| | || || | || | || | || || Sbjct 307896 GATTAACCGTTTCGCGTCGAAGACTGTGTTGTTGGGGTTCAGGGCCACCTGGTTCTTAGC 307955 Query 282733 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 || || || |||| || | || || ||||| |||| || || || ||||| || | | Sbjct 307956 AGCGTCGCCGATCA-ATCTCTCCGTATCTGTGAATGCGACGTAAGACGGAGTCGTCCTGT 308014 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 | ||||| || || || || ||||| || || |||| |||||| ||||| || || Sbjct 308015 TGCCTTGGTCGTTTGCGATGATTTCGACATTTCCATGTTGCCAAACACCAACGCAGGAGT 308074 Query 282852 AAGTTGTTCCTAAATCAATACCAATAGC 282879 ||||||| || | ||||||||||||||| Sbjct 308075 AAGTTGTACCGAGATCAATACCAATAGC 308102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740365528299270