Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq41 113 8e-20 >seq41 Length=2363699 Score = 113 bits (124), Expect = 8e-20 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 182975 ATATCTATTCTATTAAACAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCAT 183034 |||| ||| | || |||| || || |||||||| |||||| || ||||| | Sbjct 735305 ATATATATACACTTGAACAGTTCTGCAAAGCAGAAACCCATGACGACCTGTGGAACTCGG 735364 Query 183035 CACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTA 183094 | |||||||| ||| | | ||| || || |||||| | ||| || ||||||||||| || Sbjct 735365 CTCAAATACAAATGGTTAAAGAGGGGAAGATGCATGGGTTTCTAAGAATGTACTGGTGTA 735424 Query 183095 AAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGA 183154 | ||||| || || ||||| | ||||||||| || |||| ||| || ||| ||| Sbjct 735425 AGAAGATCCTAGAGTGGACCTCGAGTCCGGAAGAGGCATTGAAATATGCCATATATTTGA 735484 Query 183155 ACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGT-TGTA 183205 || || | ||| | ||||| | ||| |||| |||||| || ||| |||| Sbjct 735485 ACGATCATTACAGTGTTGACGGCAGGGACCCTAGCGGATATGTTGGTGTGTA 735536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903350276207200