Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= NC_030200.1 Length=137448 Score E Sequences producing significant alignments: (Bits) Value seq24 84.2 2e-11 >seq24 Length=1022294 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 49461 TATAGCACAAATTATGAGCCATCATTATACTTGGATATAAACTTTGAAAATCAAAAACTA 49520 ||||||| || ||||| ||||||||||||||||| |||| | | |||||| || | Sbjct 259417 TATAGCATAAGTTATGGGCCATCATTATACTTGGGTATAGAGATGCAAAATCCAATGTTG 259358 Query 49521 AGGTTGGAGTTGCGTAATATCCAATTTTGGGATCCAAAACCGTAGCTCC 49569 || ||||| ||| |||||||| ||||||| || | ||| ||||| || Sbjct 259357 AGATTGGATCTGCATAATATCCCTTTTTGGGTTCAATAACTGTAGCCCC 259309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439675947353600