Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1253 84.2 3e-11 >seq1253 Length=553177 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || | ||| | ||| || ||||| | ||||||||||| || ||||| |||| Sbjct 470434 TTCCTCCACGAAGACGTAAAACTAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCTG 470375 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | ||| || | || || || || || |||| | |||||| || |||| Sbjct 470374 AAAGCGTACGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGAG 470315 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| ||||| |||||||| Sbjct 470314 GAATACCTTCCTTATCTTG 470296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743258721201920