Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2190 96.9 3e-15 >seq2190 Length=2111488 Score = 96.9 bits (106), Expect = 3e-15 Identities = 123/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 20399 TAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTT-TACGTTGCTAATAATGAATTG 20457 ||||||| || || || || ||| |||| ||| | || || || || ||| |||| || Sbjct 1172643 TAATGGCGTTACCACCGTGCCAT-TGCTTGGCCCAGTTCTATGTAGCAAATGGTGAACTG 1172701 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || || |||||||||||| |||| ||||||||||| | |||||||| || || || || Sbjct 1172702 TCTTGCCAAATGTATCAAAGATCTGCTGATATGGGTTTAGGTGTTCCCTTTAACATAGCC 1172761 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 || ||| | |||| || | ||||| || || || || | | |||| Sbjct 1172762 AGCTATTCTTTGCTGACATGCATGATAGCTCACGTCACTGGTCTAAA 1172808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399043881550945