Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_004333.2 Length=48247 Score E Sequences producing significant alignments: (Bits) Value seq16862 80.6 8e-11 >seq16862 Length=295 Score = 80.6 bits (88), Expect = 8e-11 Identities = 75/94 (80%), Gaps = 5/94 (5%) Strand=Plus/Minus Query 17815 GGAGACGTGGCTGAGTGGTCGAAAGCGCTCCCCTGCTAAGGGA--ACGCCTGGAGTAATC 17872 ||||| ||||| |||||| |||| ||||||||||||||||||| || ||| || Sbjct 220 GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTACACCT---CAAAAG 164 Query 17873 TGGGTCGAGGGTTCGAATCCCTCCGTCTCCGCCA 17906 | |||| ||||||||||||| || ||||||||| Sbjct 163 GGTGTCGGGGGTTCGAATCCCCCCTTCTCCGCCA 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154216038238458