Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq8007 96.9 1e-15 >seq8007 Length=747 Score = 96.9 bits (106), Expect = 1e-15 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 56627 CGCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACC-CGCCACC 56685 ||||||||||||||| || |||||||| || | ||| || | || ||||| | Sbjct 406 CGCCTGCTCCAGCGCGTCGAGCACGAACTCGGTGTGCATCGA-GCTGCTCTGGCGCCAGC 464 Query 56686 CCACGATGTATCCGGCA-AACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCAT 56744 |||||||| ||||| ||||| || |||| |||||||||||||| |||| ||||| Sbjct 465 CCACGATGCG-CCGGCTGAACACGTCGATGACGAACGCCACATAGACCCAGCCTTGCCAG 523 Query 56745 GTGCTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGA 56804 || || || || ||||| | ||||| ||||||| || || || || |||||| Sbjct 524 GTCGAAACATAGGTGAAATCCGAGACCCAGAGCTGGTTCGGCCGCTCGGCACGGAACTGC 583 Query 56805 CGGTTTACGCGGTC 56818 || || |||||||| Sbjct 584 CGATTGACGCGGTC 597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200464009981587