Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_007145.2 Length=37639 Score E Sequences producing significant alignments: (Bits) Value seq8128 86.0 2e-12 >seq8128 Length=492 Score = 86.0 bits (94), Expect = 2e-12 Identities = 160/226 (71%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 11686 AGTTGCCGCCGTCGATCTCCGACAGCACGGTTTCCATGATCCAGACCCACGGCTCGCGAT 11745 || |||||| ||||||| ||||| || | || |||||| ||||| || | ||| | Sbjct 299 AGCTGCCGCGTGCGATCTCGCTCAGCAGCGTCTTCACGATCCACACCCATGGGTGGCGTT 240 Query 11746 CGGCGCTCG-TCTCGGCGACGTGGCTGTTCATTTCTGCGAG-CAGGTCGTGCGGAAAACC 11803 || | |||| | ||| | | |||||||||||| | ||| | ||||||| | |||| | Sbjct 239 CGCC-CTCGGTGTCGCCAATGTGGCTGTTCATCTG-GCGCGTCAGGTCGCCCAGAAAGTC 182 Query 11804 GCCCTCGCTCGGGTCCATGCCGGCGAATTCGCACAGATAGCGCCAGGCGAGGGCG-ACGG 11862 ||||| | || ||||||||||| |||||||| |||| | || | ||| |||| Sbjct 181 GCCCTGCGACACATCGATGCCGGCGAAATCGCACAG-CAGCGTCCAGCCCGCGCGCACGG 123 Query 11863 CGGCGTAGTTGGCGGCCATACGGTTCGCGCCATCATCAGC-GCCGC 11907 || |||| || | | ||| ||| |||||| | ||| | ||||| Sbjct 122 CGCCGTAATTTGTGATCATCCGGGCCGCGCCGGCGTCATCGGCCGC 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120282048036762