Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq984 80.6 7e-12 >seq984 Length=2983 Score = 80.6 bits (88), Expect = 7e-12 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || ||||| |||||| || | |||||| |||| || |||| | || |||||| Sbjct 183 TGCACTTTCAACAAATTTGGCACGTCGGGCGAGGTGGAGAAGCACGACGCCCTGTGCATC 242 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 || ||| |||||||||||||| || || ||||| ||||||||||| |||||| Sbjct 243 CTTCCGCTCAACGTGGTCAACGAAAAAATTTACATCTTCCTCTGGTTTTGGTTC 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12476068663500