Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq359 318 4e-81 seq1774 291 6e-73 seq2121 206 2e-47 seq687 102 6e-16 seq944 96.9 3e-14 seq24 91.5 1e-12 seq626 89.7 4e-12 >seq359 Length=249766 Score = 318 bits (352), Expect = 4e-81 Identities = 401/545 (74%), Gaps = 7/545 (1%) Strand=Plus/Minus Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 518231 |||| ||||| |||| |||||| ||||| ||||||||||| |||| ||||||||||||| Sbjct 4988 CAAG-CCATAGGCAATAGCAGCTGCAGTAGGTTCATTAATGATTCGTAAAACATTAAGAC 4930 Query 518232 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 518291 ||||||| |||| |||||||| || ||||| | || |||||||||||||| ||||| | Sbjct 4929 CAGCAATGGTTCCAGCATCTTTGGTAGCTTGACGCTGGGAATCGTTAAAATAAGCAGGTA 4870 Query 518292 CAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTT 518351 |||||| ||| |||| | || | || || | |||||| || |||| ||||| | Sbjct 4869 CAGTAACAACAGCATTGGCCACAGCCTTTCCCAAATAAGCTTCAGCAGTTTCCTTCATCT 4810 Query 518352 TACTTAAAATCATTGATGAAATTTGTTCTGGG--GAATATTGCTTGGATTCATTTTGATA 518409 | | | ||| || || |||| |||||| |||| || || | ||||||| ||| Sbjct 4809 TCAGCAGTACCATGGAAGATATTTCCTCTGGGAAGAATGTT--TTTGTCTCATTTTTATA 4752 Query 518410 TGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCAT 518469 | |||| || | ||||| |||| || ||||||||| ||||||||| | |||||| Sbjct 4751 TTCAACTTGAATCTTCGGTTTTCCACCATCACTAATAACTTCAAATGGCCAATGTTTCAT 4692 Query 518470 ATCTGATTGAAC-ACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAA 518528 || | ||| || || | ||| | ||| | || || | |||||||||||||| | Sbjct 4691 GTCCGCTTGGACGACAGT-GTCCTCAAATCGGCGGCCGATAAGGCGTTTTGCATCAAAGA 4633 Query 518529 TAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTG 518588 || ||| | ||||| || || |||| | ||| || ||||| ||||||||| | || | Sbjct 4632 CTGTGTTGTTAGGATTCATAGCTACTTGGTTTTTTGCAGCATCACCAATCAGACGCTCAG 4573 Query 518589 TCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTT 518648 | |||| ||| | ||||||||||| || ||||| || ||||||||||| |||||||| | Sbjct 4572 TGTCTGAAAACGCTACATATGATGGTGTGGTGCGGTTTCCTTGATCATTTGCAATAATCT 4513 Query 518649 CAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 | || || || | || |||| || ||||| ||||||| || |||||||| |||| Sbjct 4512 CCACCTTGCCGTGCTGGAATACCCCAACACACGAGTAAGTTGTACCCAAATCAATGCCAA 4453 Query 518709 TAGCA 518713 |||| Sbjct 4452 CAGCA 4448 Score = 113 bits (124), Expect = 3e-19 Identities = 210/305 (69%), Gaps = 14/305 (5%) Strand=Plus/Minus Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 ||||||| || || || | ||||| | |||||| ||| ||| | || || || || | Sbjct 5377 AATCAATACCCTCAAAAAGGGAATCGATTTCAATGCTAGCTTGGGCAGACGATGACAGGG 5318 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA----AGGCTT-TTGCTGATTG 517965 |||||| ||||| || || || || | ||| | |||| | |||| ||| ||| Sbjct 5317 TACGTTTGGCACGCTCGCAAGCAGTACGTAGGCGACGTAGAGCACGCTTGTTGGTGAC-- 5260 Query 517966 ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGA 518023 || ||| | || || |||| |||||| |||| |||| | ||| | || | ||| Sbjct 5259 ---CATATCCTTCTTGTACTTTCGCTTGAACTCTTGAACAAA--ATGGTTGACCATACGG 5205 Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || |||||||| || || || || | ||||| ||| | || | | | |||| |||| | Sbjct 5204 TTGTCAAAATCCTCTCCACCTAAATGAGTATCTCCGGCAGTTGATTTCACTTCAAAAATT 5145 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 |||||||||| | ||| | | |||||| ||||||||||| | ||| || ||||| Sbjct 5144 CCATCTTCAATTGTCAAGATCGAAACATCAAAAGTTCCACCACCAAGATCGAAGATAAGG 5085 Query 518144 ACATT 518148 || || Sbjct 5084 ACGTT 5080 Score = 104 bits (114), Expect = 2e-16 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 517591 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATT 517650 ||| ||||| |||| ||||| ||||||||||| || ||||| ||||||| | || || Sbjct 5703 AATTGCTGCCTGAACGGCAGCGCCATATGCAACGGCCTCATCGGGATTAATCGATTTGTT 5644 Query 517651 TAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATG 517709 ||||| ||| |||||||| |||| ||| || | || | || ||||||||||||| | Sbjct 5643 TAGTTCTTTCCCATTGAAGAAATCTTGCAACAGCTTCT-GGACTTTAGGAATACGAGTGG 5585 Query 517710 ATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAA 517769 | || ||||| | || || || || | || | ||| |||| ||||| || | Sbjct 5584 AGCCGCCAACAAGAACTATGTCCTGAATTTGGGCTTTGTCCATTTTTGCGTCACGGATGG 5525 Query 517770 CTTTTTCAACGGGTTC 517785 | |||||||| ||||| Sbjct 5524 CCTTTTCAACAGGTTC 5509 >seq1774 Length=9228 Score = 291 bits (322), Expect = 6e-73 Identities = 400/552 (72%), Gaps = 8/552 (1%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 |||||||| | ||||| |||| ||||||||||| || |||||||| || | | |||| Sbjct 902 TTTTTATCTAACCCATAAGCAATGGCAGCAGCAGTAGGCTCATTAATGATACGAAGAACA 843 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || |||||||||||| |||| ||||||||||||||||||| || ||||| |||||||| Sbjct 842 TTTAGACCAGCAATTGTTCCAGCATCTTTAGTGGCTTGTCGCTGGGAATCATTAAAATAG 783 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 ||||| || || | ||| |||| | || ||| |||| ||||| || |||| | Sbjct 782 GCAGGGACGGTTACAACAGCATTACCAACAGTTTTGCCAAGGTAAGCTTCGGCAGTTTCT 723 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG--GAATATTGCTTGGATTCAT 518402 |||||||| || | ||| || ||||| | ||||||| |||| || |||| ||||| Sbjct 722 TTCATTTTGAGCAACACCATGGAGGAAATCTCTTCTGGGAAGAATGTT--TTGGTTTCAT 665 Query 518403 T-TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAG 518461 | ||| || | || | | | |||||| ||| || ||| |||| ||||||||| Sbjct 664 TCTTGTAATCA-ACCTGGATCTTTGGTTTCCCTCCATCACTAACTACTTCAAATGGCCAA 606 Query 518462 TATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAATTAATCGTTTTGC 518520 | |||||| || | || ||| || || ||||| | || || ||||| || || Sbjct 605 TGTTTCATGTCAGCCTGGACAACAGAATC-TTCGAATCTGCGTCCGATCAATCGCTTAGC 547 Query 518521 ATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAG 518580 ||||| | |||||||| ||||| ||||| |||| | ||||| ||||| || || || Sbjct 546 GTCAAATACTGTATTGGTAGGATTCATTGCGACTTGGTTCTTGGCAGCATCACCGATAAG 487 Query 518581 ATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGC 518640 | |||| || || ||||||| || || || || || || |||||||| || ||||| || Sbjct 486 ACGTTCGGTGTCGGTAAATGCCACGTAAGAAGGTGTGGTTCGATTACCCTGGTCATTAGC 427 Query 518641 AATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATC 518700 ||| ||||| || || |||| || | ||||| ||||| | ||||| || ||||| Sbjct 426 AATGATTTCTACCTTTCCATGCTGGAAAACACCAACACAGGAGTAGGTTGTACCCAAATC 367 Query 518701 AATACCAATAGC 518712 ||| || | ||| Sbjct 366 AATGCCCACAGC 355 Score = 122 bits (134), Expect = 7e-22 Identities = 209/300 (70%), Gaps = 4/300 (1%) Strand=Plus/Minus Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 ||||||| || || || | |||||||| || || ||| ||||| ||| ||||| | | Sbjct 1275 AATCAATACCCTCAAAGAGAGAATCAATCTCGATGCTAGCTTGAGCCGAGGAAGACAAGG 1216 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCT-GATTG-ATT 517968 ||| || ||||| || |||||||| | || | || | ||| ||| | ||| | Sbjct 1215 TACGCTTGGCACGCTCGCATGCTGTTCGAAGGCGACGCAGGGCAC--GCTTGTTTGTAGC 1158 Query 517969 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028 || ||| | || ||||| | ||||| |||| |||| | | || | || || || Sbjct 1157 CATATCCTTCTTGTATTTCCGTTTGAACTCTTGAACAAAGTGGTTCACCATGCGGTTGTC 1098 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 ||||||||| |||||||| | ||||| || | |||| | |||| |||| ||||| Sbjct 1097 AAAATCTTCTCCTCCCAAGTGAGTATCACCAGCAGTAGACTTAACTTCAAAAATGCCATC 1038 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 ||||| | || | | |||||| |||||||||||| | ||| || ||||||||||| Sbjct 1037 TTCAATTGTTAAGATTGAAACATCAAAGGTTCCACCACCAAGATCGAAGATAAGTACATT 978 Score = 95.1 bits (104), Expect = 9e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 517589 AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCA 517648 ||||||||||| |||| |||||| ||||| ||||| || ||||||||||| | | | Sbjct 1593 AGAATAGCTGCCTGAACAGCAGCGCCATAGGCAACTGCCTCATCAGGATTGATCGACTTG 1534 Query 517649 TTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGA 517707 || |||| ||| || || || |||| ||| || || || | || || ||||| | || Sbjct 1533 TTGAGTTCTTTTCCGTTAAAGAAATCTTGCAACAA-TTTTTGGACTTTCGGAATCCTAGT 1475 Query 517708 TGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATC 517761 ||| || ||||| | ||||| || || | ||| | ||||||| ||| | ||| Sbjct 1474 TGAACCACCAACAAGAACAATATCCTGAATCTGGGTCTTATCCATTTTGGCATC 1421 Score = 87.8 bits (96), Expect = 1e-11 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 322239 CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAAC 322298 |||| || || |||| || || ||||| || |||||||| || |||||||| || || Sbjct 895 CTAACCCATAAGCAATGGCAGCAGCAGTAGGCTCATTAATGATACGAAGAACATTTAGAC 836 Query 322299 CCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 322358 | |||||| | ||| ||| ||| ||||||| ||| | ||||||||||| || || | Sbjct 835 CAGCAATTGTTCCAGCATCTTTAGTGGCTTGTCGCTGGGAATCATTAAAATAGGCAGGGA 776 Query 322359 CAGTAATAACTGCTTTATTAATAGGTTT 322386 | || | ||| || ||| || || ||| Sbjct 775 CGGTTACAACAGCATTACCAACAGTTTT 748 >seq2121 Length=850518 Score = 206 bits (228), Expect = 2e-47 Identities = 595/908 (66%), Gaps = 8/908 (1%) Strand=Plus/Plus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 || || || || || ||||| || || | ||| || || ||||| | ||||| || ||| Sbjct 530467 GTCGACTTGTCGGCAGCAGTAACGTTCAAAATGCCGTTCGCATCGATGTCAAAGGTAACT 530526 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 || || || || || |||| ||||||| || || || ||| | ||| |||||| Sbjct 530527 TCGATCTGGGGTACGCCTCGAGGAGCAGGAGGAATGCCAGTCAACTCGAATTTTCCCAAC 530586 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 ||| || || ||||| | |||||| |||||| | | ||||| || ||| | Sbjct 530587 AGATTGTTGTCCTTAGTCATGGCTCGTTCTCCCTCGTACACCTGGATGAGGACGCCAGGT 530646 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTA 517483 || ||||| | ||| ||||| || ||| | || || || || || ||||| | Sbjct 530647 TGGTTATCAGCATACGTTGTGAAAACTTGAGTTTGCTTCGTTGGGATAGTGGTGTTCCGC 530706 Query 517484 TCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACA 517543 | || | ||||||| ||| || |||||||| | ||||| || ||||||| || Sbjct 530707 TTGATGAGGGAAGTCATAACACCGCCAGCTGTTTCAATTCCAAGCGACAGAGGAGCAACG 530766 Query 517544 TCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGA 517603 |||| || | | || ||| | || | | ||| |||||| || || || Sbjct 530767 TCAAGCAGCAACAAATCTTGGACCGCCTCCGACTTATCCCCATGAAGAATTGCAGCCTGG 530826 Query 517604 ATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCA 517663 | || ||||| ||||| || |||||||||||||| | || | || |||| || ||| Sbjct 530827 ACCGCGGCACCGTATGCGACGGCTTCATCAGGATTGATAGACTTGTTCAGTTCCTTTCCA 530886 Query 517664 TTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAA 517722 ||||| || | ||| || | || | | || |||||||||| ||| |||||||| || Sbjct 530887 TTGAAGAAGTCTTGCAACATCTTCT-GAATTTTGGGAATACGAGTTGAACCTCCAACCAA 530945 Query 517723 TACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGG 517782 ||| |||||||| | || || || |||| || | ||| | | || ||||| || Sbjct 530946 TACGATTTCATGAATTTGGGACTTGTCCATCTTAGCATCTCGCAGGGCCTTCTCAACTGG 531005 Query 517783 TTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGT 517842 || | | | | || | ||| | || || |||||||| || || || | | Sbjct 531006 CTCCAAAGTACCACGGAAAAGGTCGGCGCATAGCTCTTCGAAACGCGCCCTTGTGATGCT 531065 Query 517843 GACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 517902 | | ||||||| |||||| | | || |||| || || | | ||| | || || Sbjct 531066 GGTGTAGAAATCAATGCCTTCGTAGAGTGAGTCAATCTCGATTGACGCTTGGCTGGAGGA 531125 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA 517962 ||||| | || || || || || || ||||| | || | |||| |||| | | Sbjct 531126 AGATAAGGTGCGCTTTGCCCGCTCGCAAGCTGTACGAAGACGCCGTAGGGCTCGAG-GGT 531184 Query 517963 TTG-ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAG 518019 | | | ||||||| | || | |||||| ||||| |||| ||| | ||| | || | Sbjct 531185 TAGAAGACAAATCTTTCTTGTGTTTTCTGTTGAACTCTTGGACAAA--ATGGTTGACCAT 531242 Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||||| || || |||||||| ||||| | |||| ||| | ||| | | | |||| ||| Sbjct 531243 CCGATTGTCGAAGTCTTCACCACCCAAGTGCGTATCTCCCGCCGTCGATTTAACTTCGAA 531302 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 || || ||||| | || | | | ||||| ||| || ||||| | ||||||||| Sbjct 531303 AATACCTTCTTCGATAGTGAGCATGGAAACATCGAAGGTGCCGCCACCAAGATCAAAAAT 531362 Query 518140 AAGTACAT 518147 | |||| Sbjct 531363 CAAAACAT 531370 Score = 143 bits (158), Expect = 2e-28 Identities = 243/352 (69%), Gaps = 0/352 (0%) Strand=Plus/Plus Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235 |||||| |||| |||||||| || || || |||||||| | | || || | || | Sbjct 531462 ACCATAAGCAATGGCAGCAGCTGTCGGCTCGTTAATAATACGAAGGACGTTCAATCCCGA 531521 Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 || |||||||||| || || ||||| | ||| |||||||| ||||||||||||||||| Sbjct 531522 GATGGTTCCTGCATCCTTTGTTGCTTGACGTTGGGAATCGTTGAAATATGCAGGAACAGT 531581 Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACT 518355 ||| ||||||||||| |||| || || | ||||| ||||| | ||||| || Sbjct 531582 AATCACGGCATCAGTGACTTTTTGCCCTAGGTAAGCTTCAGCCGTCTCCTTCATCTTGAC 531641 Query 518356 TAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATAC 518415 | | ||| || || || | ||| || ||| | || | ||| || || ||| Sbjct 531642 AAGCACCATAGAAGAGATCTCTTCGGGAGAAAACGTTTTCGTTTCCCCTTTGTAATCTAC 531701 Query 518416 TTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGA 518475 || || | ||||| ||| | | |||||||| |||||||| | |||||||| Sbjct 531702 TTGAATTTTCGGTTTTCCTCCATCGCTTATAACTTTGAATGGCCAATGCTTCATATCACT 531761 Query 518476 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAA 518527 || ||| | ||||| ||| | ||||| || ||||||||||| ||| Sbjct 531762 CTGGACAGTGGCGTCATCAAATCGACGGCCAATCAAACGTTTTGCATCTAAA 531813 Score = 140 bits (154), Expect = 2e-27 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 518520 CATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 || |||||| || ||| | ||||| || || |||| | ||||||||||||||| || | Sbjct 531863 CACCAAAAACTGTGTTGATAGGATTCATGGCTACTTGGTTTTTGGCTGCATCTCCGATTA 531922 Query 518580 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 || ||||||| || ||||| | ||| || ||||| ||||| |||||||| ||||| || | Sbjct 531923 GACGTTCTGTGTCGGTAAACGCAACGTAAGATGGTGTTGTACGATTACCCTGATCGTTTG 531982 Query 518640 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 518699 |||| || || ||||| |||| || ||||||||||||| | || || || || | Sbjct 531983 CAATGATCTCCACTTTGCCATGCTGGAATACACCTACACACGAGTAGGTAGTACCCAAGT 532042 Query 518700 CAATACCAAT 518709 |||| ||||| Sbjct 532043 CAATGCCAAT 532052 >seq687 Length=2295375 Score = 102 bits (112), Expect = 6e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 668848 ATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTC 668907 ||| | ||| ||||||||||||||| |||| ||||| ||||| |||||||| || | || Sbjct 1940913 ATTTATAGGCAAAGAAGGTCGTATTCGAGGTAATTTAATGGGTAAACGTGTTGACTTTTC 1940972 Query 668908 TGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCT 668967 |||||||| || ||||| | ||||||||| || | || || |||| || ||||| | Sbjct 1940973 GGCACGTACGGTCATTACGCCAGATCCCAATCTTCGTATCGATCAAGTGGGCGTTCCACG 1941032 Query 668968 TATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 | ||| || |||| | || ||| ||||| || || Sbjct 1941033 AAGTATCGCGCAAAACATGACCTTTCCTGAAATCGTGAC 1941071 >seq944 Length=2137955 Score = 96.9 bits (106), Expect = 3e-14 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 870798 TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGAT 870857 ||||||| |||| || || || || ||||| || |||||||| | || ||| | |||| Sbjct 2037717 TTATTGTTGATTTCTCATCACCGAACATTGCCAAGGAAATGCACGTAGGTCATCTGAGAT 2037658 Query 870858 CAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATC 870917 ||||||| ||||| || || || | | | | ||| | ||| || || || || Sbjct 2037657 CAACTATCATTGGCGACAGCATATGCAAGTTGCTTGAATTCCTTGGCCATGACGTGGTTC 2037598 Query 870918 GTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 870970 |||| ||||| |||||||| |||||||| || || || |||||| | ||| || Sbjct 2037597 GTATGAATCACGTGGGTGACTGGGGAACCCAGTTTGGCATGTTACTCGCTCAT 2037545 >seq24 Length=3543970 Score = 91.5 bits (100), Expect = 1e-12 Identities = 167/244 (68%), Gaps = 3/244 (1%) Strand=Plus/Minus Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 || || ||||| || || || ||||| |||||| | ||||| | | || | Sbjct 1106205 ATCACCTTAAAGGGGAAGAGCTTGATATCATGCTGAACAGTATGGTCTGTCCAGTCACGT 1106146 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | || || |||||||| | |||||| || || | | | ||| | |||| Sbjct 1106145 CCAATGAGACGCTTGGCATCAAATACAGTATTTTCAGGGTTGGTAGTAAGTTGGTTTTTG 1106086 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTG---TAAATGAAACATATGATGGAGTTGTG 518620 || ||||| ||||| || |||| | || | |||| | |||||| |||||||| | Sbjct 1106085 GCAGCATCACCAATAAGGCGTTCATTATCAGCAGTAAAAGCAACATAGGATGGAGTAATA 1106026 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 || || ||||||||||||| || |||||||| ||||||| | ||||| |||| | Sbjct 1106025 CGGTTTCCTTGATCATTCGGGATGATTTCAACACGGCCATTTTTGAAGACACCCACACTA 1105966 Query 518681 CTAA 518684 | || Sbjct 1105965 CAAA 1105962 >seq626 Length=1369339 Score = 89.7 bits (98), Expect = 4e-12 Identities = 206/308 (67%), Gaps = 13/308 (4%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| || |||||||| || ||||||||||| || | || || | |||||| | | Sbjct 256898 TGTACGCTCATTTTGACGGAAGGAGATTCAGCCAAGTCTTTGGCCGTCTCTGGTTTGGGT 256839 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 || |||| | ||| | | ||| || |||||||||| ||||| | | || || | Sbjct 256838 GTGGTTGGTCGTGATAAATTTGGTGTCTTCCCACTTAAGGGAAAGGTACTCAACGTCCGA 256779 Query 635561 GATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCaaa--aaaaTTG 635618 || || | || |||| | ||| || |||| || || || ||| || |||||| Sbjct 256778 GAGGCAACTCATAAACAGATTATGGAGAATGCTGAGAT--CAATAATTTAATCAAAATTC 256721 Query 635619 TTGGACTTGA--ACAAGGAAAAGT-------TTATGATGATCTCAAAGGTTTACGATATG 635669 | |||||| | ||||| |||| | | ||| || |||||| | || || | Sbjct 256720 TCGGACTTCAATACAAGAAAAAATACGAAACTATTGAAGACCTCAAAACACTTCGTTACG 256661 Query 635670 GTAGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCA 635729 | || | ||||| | | ||||||||| ||||| | |||||||||||| || | | Sbjct 256660 GACGTTTGATGATCATGACAGATCAAGATCAGGATGGATCCCATATCAAAGGCTTGCTGA 256601 Query 635730 TGAATTTT 635737 | |||||| Sbjct 256600 TTAATTTT 256593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779393199509506