Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq359 322 4e-82 seq1774 286 3e-71 seq2121 221 9e-52 seq687 98.7 7e-15 seq944 96.9 3e-14 seq626 86.0 5e-11 seq24 86.0 5e-11 >seq359 Length=249766 Score = 322 bits (356), Expect = 4e-82 Identities = 402/545 (74%), Gaps = 7/545 (1%) Strand=Plus/Minus Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398 |||| ||||| |||| |||||| ||||| ||||||||||| |||| ||||||||||||| Sbjct 4988 CAAG-CCATAGGCAATAGCAGCTGCAGTAGGTTCATTAATGATTCGTAAAACATTAAGAC 4930 Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458 ||||||| |||| |||||||| || ||||| | || |||||||||||||| ||||| | Sbjct 4929 CAGCAATGGTTCCAGCATCTTTGGTAGCTTGACGCTGGGAATCGTTAAAATAAGCAGGTA 4870 Query 282459 CAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTT 282518 |||||| ||| |||| | || | ||||| | |||||| || |||| ||||| | Sbjct 4869 CAGTAACAACAGCATTGGCCACAGCCTTTCCCAAATAAGCTTCAGCAGTTTCCTTCATCT 4810 Query 282519 TACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTGGATTCATTTTGATA 282576 | | | ||| || || |||| ||||| ||||| || || | ||||||| ||| Sbjct 4809 TCAGCAGTACCATGGAAGATATTTCCTCTGGGAAGAATGTT--TTTGTCTCATTTTTATA 4752 Query 282577 TGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCAT 282636 | |||| || | ||||| |||| || ||||||||| ||||||||||| |||||| Sbjct 4751 TTCAACTTGAATCTTCGGTTTTCCACCATCACTAATAACTTCAAATGGCCAATGTTTCAT 4692 Query 282637 ATCTGATTGAAC-ACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAA 282695 || | ||| || || | ||| | ||| | || || | |||||||||||||| | Sbjct 4691 GTCCGCTTGGACGACAGT-GTCCTCAAATCGGCGGCCGATAAGGCGTTTTGCATCAAAGA 4633 Query 282696 TAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTG 282755 || ||| | ||||| | || |||| | ||| || ||||| ||||||||| | || | Sbjct 4632 CTGTGTTGTTAGGATTCATAGCTACTTGGTTTTTTGCAGCATCACCAATCAGACGCTCAG 4573 Query 282756 TCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTT 282815 | |||| ||| | ||||||||||| || ||||| || ||||||||||| |||||||| | Sbjct 4572 TGTCTGAAAACGCTACATATGATGGTGTGGTGCGGTTTCCTTGATCATTTGCAATAATCT 4513 Query 282816 CAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 | || || || | || |||| || ||||| ||||||| || |||||||| |||| Sbjct 4512 CCACCTTGCCGTGCTGGAATACCCCAACACACGAGTAAGTTGTACCCAAATCAATGCCAA 4453 Query 282876 TAGCA 282880 |||| Sbjct 4452 CAGCA 4448 Score = 116 bits (128), Expect = 3e-20 Identities = 211/305 (69%), Gaps = 14/305 (5%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 ||||||| || || || | ||||| | |||||| ||| ||| | || || || || | Sbjct 5377 AATCAATACCCTCAAAAAGGGAATCGATTTCAATGCTAGCTTGGGCAGACGATGACAGGG 5318 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA----AGGCTT-TTGCTGATTG 282132 |||||| ||||| || || || || | ||| | |||| | |||| ||| ||| Sbjct 5317 TACGTTTGGCACGCTCGCAAGCAGTACGTAGGCGACGTAGAGCACGCTTGTTGGTGAC-- 5260 Query 282133 ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGA 282190 || ||| | || || |||| |||||| |||| |||| | ||| | || | ||| Sbjct 5259 ---CATATCCTTCTTGTACTTTCGCTTGAACTCTTGAACAAA--ATGGTTGACCATACGG 5205 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || |||||||| || || || || | ||||| ||| | || | | | |||| |||| | Sbjct 5204 TTGTCAAAATCCTCTCCACCTAAATGAGTATCTCCGGCAGTTGATTTCACTTCAAAAATT 5145 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 |||||||||| | ||| | | ||||||| ||||||||||| | ||| || ||||| Sbjct 5144 CCATCTTCAATTGTCAAGATCGAAACATCAAAAGTTCCACCACCAAGATCGAAGATAAGG 5085 Query 282311 ACATT 282315 || || Sbjct 5084 ACGTT 5080 Score = 104 bits (114), Expect = 2e-16 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 281758 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATT 281817 ||| ||||| |||| ||||| ||||||||||| || ||||| ||||||| | || || Sbjct 5703 AATTGCTGCCTGAACGGCAGCGCCATATGCAACGGCCTCATCGGGATTAATCGATTTGTT 5644 Query 281818 TAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATG 281876 ||||| ||| |||||||| |||| ||| || | || | || ||||||||||||| | Sbjct 5643 TAGTTCTTTCCCATTGAAGAAATCTTGCAACAGCTTCT-GGACTTTAGGAATACGAGTGG 5585 Query 281877 ATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAA 281936 | || ||||| | || || || || | || | ||| |||| ||||| || | Sbjct 5584 AGCCGCCAACAAGAACTATGTCCTGAATTTGGGCTTTGTCCATTTTTGCGTCACGGATGG 5525 Query 281937 CTTTTTCAACGGGTTC 281952 | |||||||| ||||| Sbjct 5524 CCTTTTCAACAGGTTC 5509 >seq1774 Length=9228 Score = 286 bits (316), Expect = 3e-71 Identities = 399/552 (72%), Gaps = 8/552 (1%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 |||||||| | ||||| |||| ||||||||||| || |||||||| || | | |||| Sbjct 902 TTTTTATCTAACCCATAAGCAATGGCAGCAGCAGTAGGCTCATTAATGATACGAAGAACA 843 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || |||||||||||| |||| ||||||||||||||||||| || ||||| |||||||| Sbjct 842 TTTAGACCAGCAATTGTTCCAGCATCTTTAGTGGCTTGTCGCTGGGAATCATTAAAATAG 783 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 ||||| || || | ||| |||| || ||| |||| ||||| || |||| | Sbjct 782 GCAGGGACGGTTACAACAGCATTACCAACAGTTTTGCCAAGGTAAGCTTCGGCAGTTTCT 723 Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTGGATTCAT 282569 |||||||| || | ||| || ||||| | |||||| ||||| || |||| ||||| Sbjct 722 TTCATTTTGAGCAACACCATGGAGGAAATCTCTTCTGGGAAGAATGTT--TTGGTTTCAT 665 Query 282570 T-TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAA 282628 | ||| || | || | | | |||||| ||| || ||| |||| |||||||||| Sbjct 664 TCTTGTAATCA-ACCTGGATCTTTGGTTTCCCTCCATCACTAACTACTTCAAATGGCCAA 606 Query 282629 TATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAATTAATCGTTTTGC 282687 | |||||| || | || ||| || || ||||| | || || ||||| || || Sbjct 605 TGTTTCATGTCAGCCTGGACAACAGAATC-TTCGAATCTGCGTCCGATCAATCGCTTAGC 547 Query 282688 ATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAG 282747 ||||| | |||||||| ||||| | ||| |||| | ||||| ||||| || || || Sbjct 546 GTCAAATACTGTATTGGTAGGATTCATTGCGACTTGGTTCTTGGCAGCATCACCGATAAG 487 Query 282748 ATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGC 282807 | |||| || || ||||||| || || || || || || |||||||| || ||||| || Sbjct 486 ACGTTCGGTGTCGGTAAATGCCACGTAAGAAGGTGTGGTTCGATTACCCTGGTCATTAGC 427 Query 282808 AATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATC 282867 ||| ||||| || || |||| || | ||||| ||||| | ||||| || ||||| Sbjct 426 AATGATTTCTACCTTTCCATGCTGGAAAACACCAACACAGGAGTAGGTTGTACCCAAATC 367 Query 282868 AATACCAATAGC 282879 ||| || | ||| Sbjct 366 AATGCCCACAGC 355 Score = 125 bits (138), Expect = 5e-23 Identities = 210/300 (70%), Gaps = 4/300 (1%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 ||||||| || || || | |||||||| || || ||| ||||| ||| ||||| | | Sbjct 1275 AATCAATACCCTCAAAGAGAGAATCAATCTCGATGCTAGCTTGAGCCGAGGAAGACAAGG 1216 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCT-GATTG-ATT 282135 ||| || ||||| || |||||||| | || | || | ||| ||| | ||| | Sbjct 1215 TACGCTTGGCACGCTCGCATGCTGTTCGAAGGCGACGCAGGGCAC--GCTTGTTTGTAGC 1158 Query 282136 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 282195 || ||| | || ||||| | ||||| |||| |||| | | || | || || || Sbjct 1157 CATATCCTTCTTGTATTTCCGTTTGAACTCTTGAACAAAGTGGTTCACCATGCGGTTGTC 1098 Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 ||||||||| |||||||| | ||||| || | |||| | |||| |||| ||||| Sbjct 1097 AAAATCTTCTCCTCCCAAGTGAGTATCACCAGCAGTAGACTTAACTTCAAAAATGCCATC 1038 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 ||||| | || | | ||||||| |||||||||||| | ||| || ||||||||||| Sbjct 1037 TTCAATTGTTAAGATTGAAACATCAAAGGTTCCACCACCAAGATCGAAGATAAGTACATT 978 Score = 95.1 bits (104), Expect = 9e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 281756 AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCA 281815 ||||||||||| |||| |||||| ||||| ||||| || ||||||||||| | | | Sbjct 1593 AGAATAGCTGCCTGAACAGCAGCGCCATAGGCAACTGCCTCATCAGGATTGATCGACTTG 1534 Query 281816 TTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGA 281874 || |||| ||| || || || |||| ||| || || || | || || ||||| | || Sbjct 1533 TTGAGTTCTTTTCCGTTAAAGAAATCTTGCAACAA-TTTTTGGACTTTCGGAATCCTAGT 1475 Query 281875 TGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATC 281928 ||| || ||||| | ||||| || || | ||| | ||||||| ||| | ||| Sbjct 1474 TGAACCACCAACAAGAACAATATCCTGAATCTGGGTCTTATCCATTTTGGCATC 1421 Score = 87.8 bits (96), Expect = 1e-11 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 86114 CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAAC 86173 |||| || || |||| || || ||||| || |||||||| || |||||||| || || Sbjct 895 CTAACCCATAAGCAATGGCAGCAGCAGTAGGCTCATTAATGATACGAAGAACATTTAGAC 836 Query 86174 CCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 86233 | |||||| | ||| ||| ||| ||||||| ||| | ||||||||||| || || | Sbjct 835 CAGCAATTGTTCCAGCATCTTTAGTGGCTTGTCGCTGGGAATCATTAAAATAGGCAGGGA 776 Query 86234 CAGTAATAACTGCTTTATTAATAGGTTT 86261 | || | ||| || ||| || || ||| Sbjct 775 CGGTTACAACAGCATTACCAACAGTTTT 748 >seq2121 Length=850518 Score = 221 bits (244), Expect = 9e-52 Identities = 598/908 (66%), Gaps = 8/908 (1%) Strand=Plus/Plus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 || || || || || ||||| || || | ||| || || ||||| | ||||| || ||| Sbjct 530467 GTCGACTTGTCGGCAGCAGTAACGTTCAAAATGCCGTTCGCATCGATGTCAAAGGTAACT 530526 Query 281471 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 281530 || || || || || |||| ||||||| || || || ||| | ||| |||||| Sbjct 530527 TCGATCTGGGGTACGCCTCGAGGAGCAGGAGGAATGCCAGTCAACTCGAATTTTCCCAAC 530586 Query 281531 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 281590 ||| || || ||||| | |||||| |||||| | | ||||| || ||| | Sbjct 530587 AGATTGTTGTCCTTAGTCATGGCTCGTTCTCCCTCGTACACCTGGATGAGGACGCCAGGT 530646 Query 281591 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTA 281650 || ||||| | ||| ||||| || ||| | || || || || || ||||| | Sbjct 530647 TGGTTATCAGCATACGTTGTGAAAACTTGAGTTTGCTTCGTTGGGATAGTGGTGTTCCGC 530706 Query 281651 TCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACA 281710 | || | ||||||| ||| ||||||||||| | ||||| || ||||||| || Sbjct 530707 TTGATGAGGGAAGTCATAACACCGCCAGCTGTTTCAATTCCAAGCGACAGAGGAGCAACG 530766 Query 281711 TCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGA 281770 |||| || | | || ||| | || | | ||| |||||| || || || Sbjct 530767 TCAAGCAGCAACAAATCTTGGACCGCCTCCGACTTATCCCCATGAAGAATTGCAGCCTGG 530826 Query 281771 ATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCA 281830 | || ||||| ||||| || |||||||||||||| | || | || |||| || ||| Sbjct 530827 ACCGCGGCACCGTATGCGACGGCTTCATCAGGATTGATAGACTTGTTCAGTTCCTTTCCA 530886 Query 281831 TTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAA 281889 ||||| || | ||| || | || | | || |||||||||| ||| |||||||| || Sbjct 530887 TTGAAGAAGTCTTGCAACATCTTCT-GAATTTTGGGAATACGAGTTGAACCTCCAACCAA 530945 Query 281890 TACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGG 281949 ||| |||||||| | || || || |||| || | ||| | | || ||||| || Sbjct 530946 TACGATTTCATGAATTTGGGACTTGTCCATCTTAGCATCTCGCAGGGCCTTCTCAACTGG 531005 Query 281950 TTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGT 282009 || | | | | | || | ||| | || || |||||||| || || || | | Sbjct 531006 CTCCAAAGTACCACGGAAAAGGTCGGCGCATAGCTCTTCGAAACGCGCCCTTGTGATGCT 531065 Query 282010 GACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 282069 | | ||||||| |||||| | | || |||| || || | | ||| | || || Sbjct 531066 GGTGTAGAAATCAATGCCTTCGTAGAGTGAGTCAATCTCGATTGACGCTTGGCTGGAGGA 531125 Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA 282129 ||||| | || || || || || || ||||| | || | |||| |||| | | Sbjct 531126 AGATAAGGTGCGCTTTGCCCGCTCGCAAGCTGTACGAAGACGCCGTAGGGCTCGAG-GGT 531184 Query 282130 TTG-ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAG 282186 | | | ||||||| | || | |||||| ||||| |||| ||| | ||| | || | Sbjct 531185 TAGAAGACAAATCTTTCTTGTGTTTTCTGTTGAACTCTTGGACAAA--ATGGTTGACCAT 531242 Query 282187 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 282246 ||||| || || |||||||| ||||| | |||| ||| | ||| | | | |||| ||| Sbjct 531243 CCGATTGTCGAAGTCTTCACCACCCAAGTGCGTATCTCCCGCCGTCGATTTAACTTCGAA 531302 Query 282247 AAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAAT 282306 || || ||||| | || | | | |||||| ||| || ||||| | ||||||||| Sbjct 531303 AATACCTTCTTCGATAGTGAGCATGGAAACATCGAAGGTGCCGCCACCAAGATCAAAAAT 531362 Query 282307 AAGTACAT 282314 | |||| Sbjct 531363 CAAAACAT 531370 Score = 143 bits (158), Expect = 2e-28 Identities = 243/352 (69%), Gaps = 0/352 (0%) Strand=Plus/Plus Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 |||||| |||| |||||||| || || || |||||||| | | || || | || | Sbjct 531462 ACCATAAGCAATGGCAGCAGCTGTCGGCTCGTTAATAATACGAAGGACGTTCAATCCCGA 531521 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 || |||||||||| || || ||||| | ||| |||||||| ||||||||||||||||| Sbjct 531522 GATGGTTCCTGCATCCTTTGTTGCTTGACGTTGGGAATCGTTGAAATATGCAGGAACAGT 531581 Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522 ||| |||||||| || |||| || || | ||||| || || | ||||| || Sbjct 531582 AATCACGGCATCAGTGACTTTTTGCCCTAGGTAAGCTTCAGCCGTCTCCTTCATCTTGAC 531641 Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATAC 282582 | | ||| || || || | ||| |||||| | || | ||| || || ||| Sbjct 531642 AAGCACCATAGAAGAGATCTCTTCGGGAGAAAACGTTTTCGTTTCCCCTTTGTAATCTAC 531701 Query 282583 TTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGA 282642 || || | ||||| ||| | | |||||||| |||||||||| |||||||| Sbjct 531702 TTGAATTTTCGGTTTTCCTCCATCGCTTATAACTTTGAATGGCCAATGCTTCATATCACT 531761 Query 282643 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAA 282694 || ||| | ||||| ||| | ||||| || ||||||||||| ||| Sbjct 531762 CTGGACAGTGGCGTCATCAAATCGACGGCCAATCAAACGTTTTGCATCTAAA 531813 Score = 136 bits (150), Expect = 3e-26 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746 || |||||| || ||| | ||||| | || |||| | ||||||||||||||| || | Sbjct 531863 CACCAAAAACTGTGTTGATAGGATTCATGGCTACTTGGTTTTTGGCTGCATCTCCGATTA 531922 Query 282747 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 282806 || ||||||| || ||||| | ||| || ||||| ||||| |||||||| ||||| || | Sbjct 531923 GACGTTCTGTGTCGGTAAACGCAACGTAAGATGGTGTTGTACGATTACCCTGATCGTTTG 531982 Query 282807 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 282866 |||| || || ||||| |||| || ||||||||||||| | || || || || | Sbjct 531983 CAATGATCTCCACTTTGCCATGCTGGAATACACCTACACACGAGTAGGTAGTACCCAAGT 532042 Query 282867 CAATACCAAT 282876 |||| ||||| Sbjct 532043 CAATGCCAAT 532052 >seq687 Length=2295375 Score = 98.7 bits (108), Expect = 7e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 432281 ATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTC 432340 ||| | ||| ||||||||||||||| |||| ||||| ||||| || ||||| || | || Sbjct 1940913 ATTTATAGGCAAAGAAGGTCGTATTCGAGGTAATTTAATGGGTAAACGTGTTGACTTTTC 1940972 Query 432341 TGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCT 432400 |||||||| || ||||| | ||||| ||| || | || || |||| || ||||| | Sbjct 1940973 GGCACGTACGGTCATTACGCCAGATCCCAATCTTCGTATCGATCAAGTGGGCGTTCCACG 1941032 Query 432401 CATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAAC 432439 | ||| ||| |||| | || ||| ||||| || || Sbjct 1941033 AAGTATCGCGCAAAACATGACCTTTCCTGAAATCGTGAC 1941071 >seq944 Length=2137955 Score = 96.9 bits (106), Expect = 3e-14 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 637121 TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGAT 637180 ||||||| |||| || || || || ||||| || |||||||| | || ||| | |||| Sbjct 2037717 TTATTGTTGATTTCTCATCACCGAACATTGCCAAGGAAATGCACGTAGGTCATCTGAGAT 2037658 Query 637181 CAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATC 637240 ||||||| ||||| || || || | | | | ||| | ||| || || || || Sbjct 2037657 CAACTATCATTGGCGACAGCATATGCAAGTTGCTTGAATTCCTTGGCCATGACGTGGTTC 2037598 Query 637241 GTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 637293 |||| ||||| |||||||| |||||||| || || || |||||| | ||| || Sbjct 2037597 GTATGAATCACGTGGGTGACTGGGGAACCCAGTTTGGCATGTTACTCGCTCAT 2037545 >seq626 Length=1369339 Score = 86.0 bits (94), Expect = 5e-11 Identities = 205/308 (67%), Gaps = 13/308 (4%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || |||||||| || ||||||||||| || | || || | ||||| | | Sbjct 256898 TGTACGCTCATTTTGACGGAAGGAGATTCAGCCAAGTCTTTGGCCGTCTCTGGTTTGGGT 256839 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||| | ||| | | ||| || |||||||||| ||||| | | || || | Sbjct 256838 GTGGTTGGTCGTGATAAATTTGGTGTCTTCCCACTTAAGGGAAAGGTACTCAACGTCCGA 256779 Query 400417 GATGCTAGTCCTaaaaaaaTTGCCGATAATGAGGAAATTACAGCAATCaaa--aaaaTTG 400474 || || | || |||| | ||| || |||| || || || ||| || |||||| Sbjct 256778 GAGGCAACTCATAAACAGATTATGGAGAATGCTGAGAT--CAATAATTTAATCAAAATTC 256721 Query 400475 TTGGACTTGA--ACAAGGAAAAGT-------TTATGATGATCTCAAAGGTTTACGATATG 400525 | |||||| | ||||| |||| | | ||| || |||||| | || || | Sbjct 256720 TCGGACTTCAATACAAGAAAAAATACGAAACTATTGAAGACCTCAAAACACTTCGTTACG 256661 Query 400526 GTAGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCA 400585 | || | ||||| | | ||||||||| ||||| | |||||||||||| || | | Sbjct 256660 GACGTTTGATGATCATGACAGATCAAGATCAGGATGGATCCCATATCAAAGGCTTGCTGA 256601 Query 400586 TGAATTTT 400593 | |||||| Sbjct 256600 TTAATTTT 256593 >seq24 Length=3543970 Score = 86.0 bits (94), Expect = 5e-11 Identities = 146/211 (69%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 282644 TGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTG 282703 |||||| | ||||| | | || | ||||| | || || |||||||| | |||||| Sbjct 1106172 TGAACAGTATGGTCTGTCCAGTCACGTCCAATGAGACGCTTGGCATCAAATACAGTATTT 1106113 Query 282704 GTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTG-- 282761 || || | | ||| | |||||| ||||| ||||| || |||| | || | Sbjct 1106112 TCAGGGTTGGTAGTAAGTTGGTTTTTGGCAGCATCACCAATAAGGCGTTCATTATCAGCA 1106053 Query 282762 -TAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACT 282820 |||| | |||||| |||||||| | || || ||||||||||||| || |||||||| Sbjct 1106052 GTAAAAGCAACATAGGATGGAGTAATACGGTTTCCTTGATCATTCGGGATGATTTCAACA 1105993 Query 282821 TTACCATTTTGCCATACACCTACACAACTAA 282851 ||||||| | ||||| |||| || || Sbjct 1105992 CGGCCATTTTTGAAGACACCCACACTACAAA 1105962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739216392613026