Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2190 84.2 3e-11 >seq2190 Length=2111488 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 146983 TTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAG 147042 || || || || ||||| || | |||| | || |||| || |||||||||||||| ||| Sbjct 1172808 TTTAGACCAGTGACGTGAGCTATCATGCATGTCAGCAAAGAATAGCTGGCTATGTTAAAG 1172749 Query 147043 GGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCG 147102 || || || | ||||| || | || || || |||| ||||| || || || || | Sbjct 1172748 GGAACACCTAAACCCATATCAGCAGATCTTTGATACATTTGGCAAGACAGTTCACCATTT 1172689 Query 147103 GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 || || || |||||| || | |||||||| || | |||||| Sbjct 1172688 GCTACATAGAACTGGGCCAAGCAATGGCACGGTGGTAACGCCAT 1172645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583277937026400