Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_026598.1 Length=58211 Score E Sequences producing significant alignments: (Bits) Value seq7338 82.4 3e-11 >seq7338 Length=490 Score = 82.4 bits (90), Expect = 3e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 23860 GGCAGCGCCTACGAGGGCCGCCTCGACCTGGGCAACACGCAGCCGGGCGACGGTAAGCGG 23919 |||||||||||||||||||| ||| ||||||||||||||| |||| ||||| ||| Sbjct 230 GGCAGCGCCTACGAGGGCCGGGCCGATCTGGGCAACACGCAGGCGGGTGACGGGGTGCGC 171 Query 23920 TTCAAGGGCCGCGGCCCTATCCAGATCACCGGCCGGTCGAACTAC 23964 ||| |||||||| | | |||| ||| || ||| | || ||| Sbjct 170 TTCCGCGGCCGCGGTATTTTTCAGACCACAGGGCGGGCCAATTAC 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186089933258226