Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_028953.1 Length=110764 Score E Sequences producing significant alignments: (Bits) Value seq7706 102 6e-17 >seq7706 Length=455 Score = 102 bits (112), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 97348 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97407 ||||| ||||| ||||| |||| || ||||| ||||| ||||| || || |||| || Sbjct 132 GTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGAGGGGCGCTGGGTGGCGAGGATCAG 191 Query 97408 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97467 || || || || || ||||||||||| ||||| ||| | | || ||| | | || Sbjct 192 GTGGATGCCCGCCGCACGCGCCTTCTGCGCGATACGGGC---GATGAGCTCTTCCACCTT 248 Query 97468 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGGAG 97527 |||| | || |||||| | ||| |||| ||||||||| | ||||||||| ||| || Sbjct 249 CTTGCCGACGATCATCATCATGTCGGCGAATTCGTCGACGATGACCACGATGGTGGGCAG 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354195629361725