Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq16310 84.2 2e-11 >seq16310 Length=633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/137 (74%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 39041 ACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTT 39100 || ||||||| || |||||| | || || || |||||||| || || |||||||| Sbjct 409 ACGAAAATTTG--CATGCCTCCCCGTAGACGCAATACCAAATGAAGAGTAGACTCTTTTT 466 Query 39101 GTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGAC 39160 | || ||||| || | || || || |||| || || || || || ||||| ||||||| Sbjct 467 GGATGTTATAGTCAGACAGCGTACGCCCGTCTTCTAGTTGCTTTCCAGCAAAAATAAGAC 526 Query 39161 GCTGCTGGTC-GGTGGG 39176 ||||||| || |||||| Sbjct 527 GCTGCTGATCGGGTGGG 543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429394824259313