Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq2190 89.7 2e-13 >seq2190 Length=2111488 Score = 89.7 bits (98), Expect = 2e-13 Identities = 111/150 (74%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 |||||||| | || |||||| | ||| ||||||||||| | ||| | || || Sbjct 1172645 ATGGCGTTACCACCGTGCCATTGCTTGGCCCAGTTCTATGTAGCAAATGGTGAACTGTCT 1172704 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 ||||| ||||||| | ||||| || ||| || || ||||| |||||||| |||||| Sbjct 1172705 TGCCAAATGTATCAAAGATCTGCTGATATGGGTTTAGGTGTTCCCTTTAACATAGCCAGC 1172764 Query 52230 TATTCCTTGCTGAC--GCATCTGATTGCTC 52257 ||||| |||||||| ||| |||| |||| Sbjct 1172765 TATTCTTTGCTGACATGCA--TGATAGCTC 1172792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190030984910610