Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq2190 87.8 2e-12 >seq2190 Length=2111488 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 50553 GGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGTTGAAAACAAACCCCGACGAT 50612 |||||||| || ||||||||| |||| | ||| ||| | ||||| || |||||| Sbjct 1172540 GGTCAAGGGGTTGATCAACTGAAAAATTTGATAGAAACGATACGTACAAATCCTGACGAT 1172599 Query 50613 CGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCG 50672 || || || | | || || ||||||||||| | || | || | ||||| ||| Sbjct 1172600 CGACGCATGATTCTTACAGCTTGGAATCCAACGGCATTACCACTAATGGCGTTACCACCG 1172659 Query 50673 TGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTTTTATCCTGTCAATGTTATCAA 50732 || ||| || || || |||| || | || | || || ||| |||||| Sbjct 1172660 TGCCATTGCTTGGCCCAGTTCTATGTAGCAAATGGTGAACTGTCTTGCCAAATGTATCAA 1172719 Query 50733 AGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGC 50773 ||||| ||||||||||||||||| ||||| || ||| |||| Sbjct 1172720 AGATCTGCTGATATGGGTTTAGGTGTTCCCTTTAACATAGC 1172760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666835044589560