Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq23 84.2 2e-11 >seq23 Length=1354378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGG 33623 ||||| || |||| |||||||| || || || |||||| | ||||||| ||||| || Sbjct 186410 CGCATCCCGCAGATTGGCGACAAATTCGCCTCCCGTCACGGTC-AGAAGGGTACGTGTGG 186352 Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683 || |||| |||| ||||||||||||||| ||| ||| || || ||| | | Sbjct 186351 AATTCAGTACCGCCAGGAGGACATGCCGTTCACTTGCGAGGGCCTGACTCCCGACATCAT 186292 Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 |||||||||||| || | || || || ||||| Sbjct 186291 CATCAACCCGCACGCCATTCCGTCTCGTATGAC 186259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356211084477958