Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq3421 95.1 3e-15 >seq3421 Length=34251 Score = 95.1 bits (104), Expect = 3e-15 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 22748 GACGGCATTTTGCAGGTAGTCAGGCGCAAGGTGCGCATAGGCCATCGTC-TGCTGAATGC 22806 |||||||| ||||||| || || |||||||| |||||| ||| ||| || || | Sbjct 33700 GACGGCATCCTGCAGGTGATCGGGTGCAAGGTGTGCATAGCGCATGGTCATGGCCAAGG- 33642 Query 22807 TCGCATGTCCCAGAATCTGTTGCAGTGCGATTATATTGCCCCCATTCATCATGAAATGGC 22866 | | ||| ||||| |||| ||||||| || || ||||| || |||| | ||| || | Sbjct 33641 TGGTATGGCCCAGGATCTTCTGCAGTGTGAGGATGTTGCCGCCGCTCATGACGAAGTGAC 33582 Query 22867 TTGCGAATGTATGCCGCAGGATGTGGGTTGCCTG 22900 | ||||| ||||||||||||| ||| | || ||| Sbjct 33581 TGGCGAACGTATGCCGCAGGACGTGCGATGACTG 33548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104460766518072