Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq2247 84.2 6e-12 >seq2247 Length=6817 Score = 84.2 bits (92), Expect = 6e-12 Identities = 81/101 (80%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 25889 TCTTGTCGCCGTAC---TTGGTCGGATGCCACTTTGCCAGTAGCTTCAGGCGGGTTTCGA 25945 |||||||||||||| |||| || || |||| ||||| | ||| |||||||| |||| Sbjct 220 TCTTGTCGCCGTACCGCTTGG--GGTTGA-ACTTCGCCAGCATCTTGAGGCGGGTCTCGA 164 Query 25946 CTTGCAGCTTGCGGTGGCCCAGCATGTCGCCGCGCTTGACC 25986 || |||||||| || ||||||||||| ||||||||||| Sbjct 163 TCTGGAGCTTGCGATGCCCCAGCATGTCCTCGCGCTTGACC 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135847633478060