Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq2078 98.7 6e-16 >seq2078 Length=6971 Score = 98.7 bits (108), Expect = 6e-16 Identities = 121/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 8204 CTGTGGGTCAGGCCACTCTTGGCA-TCGACACCAATGTGGGCCTTCATGCCAAAGTGCCA 8262 || || ||||| ||||| ||||| ||||| || || || ||||| ||||||| ||| Sbjct 269 CTATGTGTCAGCCCACT-TTGGCTGTCGACGCCGATATGCAGTTTCATCCCAAAGTACCA 211 Query 8263 CTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGT 8322 || || || || || || |||| || || || ||||||| ||| |||||||||| Sbjct 210 TTGCTTCCCCTTACGCGTTTGCCGCATTTCGGGGTCACGTTGCTTCTCACTGTTCTTGGT 151 Query 8323 CGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCT 8365 ||| || ||||| |||| ||||| |||||||| | |||||| Sbjct 150 CGAACTCGGTGCAGCAATAATGGTCGCATCGACGATCGTGCCT 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303216034208706