Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq60 91.5 8e-14 >seq60 Length=757983 Score = 91.5 bits (100), Expect = 8e-14 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 || ||||| || | ||| || || || ||| | |||||||| || || ||||||||| Sbjct 184734 ATAGGTGGCCACTTTGTGTGTAAGTTATTTGATTTGTTTACACCATTCAGCGCTGGTTTA 184675 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGA 4114 || || ||||||||| | || ||||| | |||| || |||||| || | || ||| Sbjct 184674 GTATACTTGATGTATCGTTCCTTTAAACAAATTTCCATCCATAAACCAAATACTTCCCGA 184615 Query 4115 CCGGCCAATTCTGAAAGATA 4134 ||||||||||| ||||| || Sbjct 184614 CCGGCCAATTCGGAAAGGTA 184595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276536120602558