Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq4681 259 1e-64 >seq4681 Length=1090 Score = 259 bits (286), Expect = 1e-64 Identities = 341/473 (72%), Gaps = 0/473 (0%) Strand=Plus/Minus Query 20295 GGAATACGCGGCGCGATGGGCGACCGAGCACGACATGCAGCTCGACGCTACGCTGACGTT 20354 || |||||| || ||||| | ||||||| ||||||| |||| | ||| ||| | Sbjct 1071 GGCATACGCTGCAAAGTGGGCAGCAGAGCACGGGCTGCAGCTGGACGACAAGCTCACGAT 1012 Query 20355 ACGCGACGAAGGACTGTCTGCATTCCACCAGCGCCACATCAAGCAGGGGGCACTCGGCGT 20414 | || ||||| ||||| || | ||||||||| ||| |||| |||||| || || | Sbjct 1011 GCTGGATGAAGGCCTGTCGGCCTACCACCAGCGGCACGTCAAATCGGGGGCGCTGGGGGC 952 Query 20415 ATTCCTGCGCGCGATCGAGGACGGACGCATTCAACCCGGCTCCGTGCTAATCGTCGAAGG 20474 |||||| | | | |||| ||| || || | | || || ||||| |||| || || Sbjct 951 GTTCCTGGCGGGGGTTGAGGCCGGGCGGATCGCATCTGGATCGGTGCTTGTCGTAGAGGG 892 Query 20475 ACTTGACCGCCTGAGCCGTGCAGAGCCAATTCAGGCTCAGGCACAGCTTGCGCAGATCAT 20534 || ||||| || || || ||||| || ||||||||||| || || || ||||| | Sbjct 891 GCTAGACCGGCTCTCACGCGCCGAGCCGATCCAGGCTCAGGCGCAACTGGCCCAGATTGT 832 Query 20535 CAACGCCGGCATCACAGTTGTAACAGCAAGCGATGGTCGCGAGTACAACCGTGAGCGACT 20594 || || ||||||||||| || || || |||||||| | |||| ||| ||||| || Sbjct 831 AAATGCGGGCATCACAGTGGTGACTGCGAGCGATGGAAAGGCCTACAGCCGGGAGCGCCT 772 Query 20595 GAAAGCACAGCCGATGGATCTCGTGTACAGCCTACTCGTAATGATCCGGGCGCATGAAGA 20654 ||||| | | |||||||| || ||||||||||| || || ||||||||||| |||||||| Sbjct 771 GAAAGAAAACCCGATGGACCTGGTGTACAGCCTGCTGGTGATGATCCGGGCCCATGAAGA 712 Query 20655 ATCAGACACGAAAAGCAAGCGCGTGAAAGCAGCAATTCGGCGGCAATGCGAGGGGTGGGT 20714 | ||||| || |||||||| ||||| || |||||||||| || ||||||||| Sbjct 711 AAGCGACACCAAGAGCAAGCGGGTGAAGGCCAGTATTCGGCGGCTGTGTGAGGGGTGGAA 652 Query 20715 TGCAGGAACATGGCGCGGGATCATTCGCAACGGAAAGGACCCGCACTGGGTGC 20767 ||||| || | ||||| | ||| | ||| | ||||| ||||| ||| Sbjct 651 GGCAGGCACCTATCGCGGCCGGGTGCGCCAGGGACACGACCCCGACTGGCTGC 599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143408767806376