Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1802 140 2e-28 seq1878 134 9e-27 seq746 131 1e-25 seq2920 122 6e-23 seq1525 122 6e-23 seq1259 122 6e-23 seq3870 118 7e-22 seq667 118 7e-22 seq11 118 7e-22 seq25 116 2e-21 seq4492 114 9e-21 seq4254 114 9e-21 seq3570 114 9e-21 seq3490 114 9e-21 seq2660 114 9e-21 seq2650 114 9e-21 seq2101 114 9e-21 seq340 114 9e-21 seq1496 113 3e-20 seq1331 113 3e-20 seq816 111 1e-19 seq3586 102 5e-17 seq1607 91.5 1e-13 >seq1802 Length=7342 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 183 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 242 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 243 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 277 >seq1878 Length=7209 Score = 134 bits (148), Expect = 9e-27 Identities = 91/102 (89%), Gaps = 5/102 (5%) Strand=Plus/Plus Query 25895 TTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTA 25949 |||| ||||||||||||||| ||||||| ||||||||||||||||||||| |||| Sbjct 204 TTATTCTAAGCCCGTTCCCTTAGCTGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGTA 263 Query 25950 ATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||| ||||||| |||||||||||||||||||||||||||| Sbjct 264 ATCTCATTAATCCATTCATGCGCGTCACTAATTAGATGACGA 305 >seq746 Length=14047 Score = 131 bits (144), Expect = 1e-25 Identities = 75/77 (97%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 394 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGG 453 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 454 GGTCATATTTAGCCTTA 470 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| ||||||||||||||| |||||||||||||||||||||||| || |||||||| Sbjct 6461 AAGTCCGTTCCCTTGGCTGCGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 6520 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6521 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6555 Score = 131 bits (144), Expect = 1e-25 Identities = 75/77 (97%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8662 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGG 8721 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 8722 GGTCATATTTAGCCTTA 8738 >seq2920 Length=3434 Score = 122 bits (134), Expect = 6e-23 Identities = 73/77 (95%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1009 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCGT 950 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 949 GGCGATATTTAGCCTTA 933 >seq1525 Length=7927 Score = 122 bits (134), Expect = 6e-23 Identities = 73/77 (95%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 235 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCGT 294 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 295 GGCGATATTTAGCCTTA 311 >seq1259 Length=9117 Score = 122 bits (134), Expect = 6e-23 Identities = 73/77 (95%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 4905 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCGT 4964 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 4965 GGCGATATTTAGCCTTA 4981 >seq3870 Length=1299 Score = 118 bits (130), Expect = 7e-22 Identities = 85/98 (87%), Gaps = 5/98 (5%) Strand=Plus/Plus Query 25899 AATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCT 25953 || |||||||||||| | || |||| ||||||||||||||||||||| || ||||| Sbjct 60 AACAAGCCCGTTCCCCTTGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 119 Query 25954 CGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||||| ||| |||||||||||||||||||||||| Sbjct 120 CGTTAATCCATTCGTGCGCGTCACTAATTAGATGACGA 157 >seq667 Length=64734 Score = 118 bits (130), Expect = 7e-22 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 62908 CTCTCTCTTCANAGTTCTTTTCAACTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCGT 62849 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 62848 GGCGATATTTAGCCTTA 62832 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 30071 GCCCGTTCCCCTTGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 30012 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 30011 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 29979 >seq11 Length=2187803 Score = 118 bits (130), Expect = 7e-22 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 6171 CTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGC 6230 || ||||| ||||| || || ||||| ||||| || || ||||||||||| || ||| Sbjct 1808549 CTTAACGTGAATCGGAACGTTGCGGATGCGTTTTATCGTTACAAAATGCCTCGGCTCTTG 1808608 Query 6231 GCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTC 6290 || ||||| || ||||| ||||| || || ||||| ||||||||||||||| | || ||| Sbjct 1808609 GCTAAGGTAGAAGGTAAAGGAAATGGCATCAAAACAGTCATTGTCAACATGACCGAGGTC 1808668 Query 6291 GCTAAGGCGCTCGGACGCCC 6310 || || || || ||||| || Sbjct 1808669 GCCAAAGCACTAGGACGTCC 1808688 >seq25 Length=1288025 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||||||||||||| |||||| ||||| |||||||| | Sbjct 1060215 TACCACCGCGAAGACGAAGGACCAAATGAAGAGTGGACTCCTTCTGAATGTTGTAATCCG 1060156 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | |||| | || || | ||| ||||| ||||| || || || || || || | | Sbjct 1060155 AAAGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCAGGAG 1060096 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| || || || || |||| | || ||| |||| Sbjct 1060095 GGATTCCTTCCTTGTCTTGGATCTTAGCTTTGACGTTCTCAATGGTGTCTGACGGCTCAA 1060036 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || ||||| || |||||||| |||||||| |||||||| Sbjct 1060035 CTTCGAGGGTGATGGTTTTTCCTGTCAAGGTCTTCACGAAAATCTGCAT 1059987 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||||||||||||| ||||| ||||| || |||||| || || |||||||| | Sbjct 1058011 TACCTCCTCTCAAACGCAAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCCG 1057952 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| |||| | || || || || || || || || || |||||||| || || | || Sbjct 1057951 ACAAGGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATCAGGCGTTGCTGGTCTGGGG 1057892 Query 38209 G 38209 | Sbjct 1057891 G 1057891 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||||||||||||| ||||| ||||| || |||||| || || |||||||| | Sbjct 1058410 TACCTCCTCTCAAACGCAAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTG 1058351 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || | ||||| |||||||| || || || || ||||| | | Sbjct 1058350 ACAAGGTACGACCATCTTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGATCAGGTG 1058291 Query 38209 GGA 38211 ||| Sbjct 1058290 GGA 1058288 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||||||||||| ||||| || ||||| ||||||||| || |||||||| | Sbjct 1059987 TACCTCCTCTCAAACGCAGAACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAATCTG 1059928 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || | ||||| |||||||| || || || || ||||| | | Sbjct 1059927 ACAATGTACGACCATCTTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGATCAGGTG 1059868 Query 38209 GGA 38211 ||| Sbjct 1059867 GGA 1059865 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/235 (68%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||||| ||| | || || || || || ||||| || || || |||| Sbjct 1056832 CATT-CCTCCTCTCAGACGGAGGACTAAGTGCAGGGTAGATTCCTTCTGGATGTTATAAT 1056774 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 ||||||| ||| | || || | ||||| || ||||| || | || || ||||| | Sbjct 1056773 CAGACAAGGTACGACCATCTTCCAGCTGTTTGCCAGCAAAGATCAAACGCTGCTGATCTG 1056714 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||| || || || ||| || ||| ||||||| || |||||| | | Sbjct 1056713 GTGGAATGCCCTCCTTATCTTGAATCTTGGCCTTAACATTCTCGATAGTATCAGAAGGCT 1056654 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 |||| || | || || || || || ||||| || || || || |||||||| || Sbjct 1056653 CAACCTCAAGGGTGATGGTCTTGCCAGTCAATGTCTTGACAAAGATCTGCATCTT 1056599 >seq4492 Length=1127 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 338 GCCCGTTCCCCTTGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 397 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 398 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 430 >seq4254 Length=1180 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 148 GCCCGTTCCCCTCGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 207 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 208 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 240 >seq3570 Length=1507 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 1073 GCCCGTTCCCCTTGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 1014 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 1013 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 981 >seq3490 Length=1592 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 116 GCCCGTTCCCCTCGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 57 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 56 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 24 >seq2660 Length=3997 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 3317 GCCCGTTCCCCTTGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 3376 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 3377 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 3409 >seq2650 Length=3322 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 294 GCCCGTTCCCCTTGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 235 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 234 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 202 >seq2101 Length=6951 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 6019 GCCCGTTCCCCTTGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 6078 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 6079 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 6111 >seq340 Length=58022 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || |||| ||||||||||||||||||||| || |||||||||| Sbjct 2296 GCCCGTTCCCCTTGCAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2355 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 2356 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 2388 >seq1496 Length=7998 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 7857 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 7916 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||||| ||| Sbjct 7917 ACTTATATTTAGCTTTA 7933 >seq1331 Length=8854 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 907 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCGT 848 Query 20007 GGTAATATTTAGCCTTA 20023 || |||||||| ||| Sbjct 847 GGCGGTATTTAGCTTTA 831 >seq816 Length=34228 Score = 111 bits (122), Expect = 1e-19 Identities = 80/93 (86%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| | || ||| ||||||||||||||||||||| || |||||||||| Sbjct 33479 GCCCGTTCCCCTTGCAGTGNGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 33420 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||| |||||||||||||||||||||||| Sbjct 33419 ATCCATTCGTGCGCGTCACTAATTAGATGACGA 33387 >seq3586 Length=1487 Score = 102 bits (112), Expect = 5e-17 Identities = 75/86 (87%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 25911 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTT 25965 |||||| | |||| ||||||||||||||||||||| || |||||||||||||| || Sbjct 1 CCCTTG-CAGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 59 Query 25966 CATGCGCGTCACTAATTAGATGACGA 25991 | |||||||||||||||||||||||| Sbjct 60 CGTGCGCGTCACTAATTAGATGACGA 85 >seq1607 Length=7695 Score = 91.5 bits (100), Expect = 1e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||| |||||||||||||||| |||||| || | |||||||||||||||||||||| || Sbjct 5054 CTCTTTTCAAAGTTCTTTTCATCTTTCCTTCGCAGTACTTGTTCGCTATCGGTCTCCCGT 5113 Query 20009 TAATATTTAGCCTTA 20023 ||||||||| ||| Sbjct 5114 GTATATTTAGCTTTA 5128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334926029871566