Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq3421 114 3e-21 >seq3421 Length=34251 Score = 114 bits (126), Expect = 3e-21 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 676 ACCGCATCTTCCAGGTGGTCGGGGGCGAAGTGGGCATAGCGCATCGTCATCTTGATGTCG 735 || ||||| | |||||| ||||| || | ||| ||||||||||| ||||| | | | Sbjct 33699 ACGGCATCCTGCAGGTGATCGGGTGCAAGGTGTGCATAGCGCATGGTCATGGCCAAGGTG 33640 Query 736 GTGTGGCCGAGGATGCGCTGTAGCACCAGGATGTTGCCGCCGTTCATCATGAAGTGACTG 795 || ||||| ||||| ||| || ||||||||||||||| |||| | |||||||||| Sbjct 33639 GTATGGCCCAGGATCTTCTGCAGTGTGAGGATGTTGCCGCCGCTCATGACGAAGTGACTG 33580 Query 796 GCGAAGGTATGGCGCAGAACGTGGGTGCTCTGGCCTGCGGG 836 ||||| ||||| ||||| ||||| | |||||| || || Sbjct 33579 GCGAACGTATGCCGCAGGACGTGCGATGACTGGCCAGCCGG 33539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108623710132604