Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq18 89.7 3e-13 >seq18 Length=1446981 Score = 89.7 bits (98), Expect = 3e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | ||| |||||||| | || ||||||||||| | ||| | |||||||||| Sbjct 597605 CATAAACAGATCGGGAATCCAGAGAGCGTAAAATAAATCACGCGCACGATTTTCTTCTTT 597546 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||| ||| || || | ||| | ||||| || | ||| || ||||| ||||| || || Sbjct 597545 GCCGGTATTTTTCTTCAAATCGAGAAAATCGAACACATCAGAATGCCAAGGTTCCAAGTA 597486 Query 26053 GATAGCAAA 26061 ||| ||||| Sbjct 597485 GATTGCAAA 597477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253024006764950