Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 4e-15 >seq5 Length=2511979 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTT-CGCCGAGCG 65081 ||||| || ||||||||||||| ||| ||| || || | || |||| | || | Sbjct 2472126 AAGAAAGCTGAATGGGCAATGAAGTGGATTGGCAATAAAGAT-GCACCTTACAGTGAAAG 2472068 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTT 65140 | |||| ||||| ||||| || || |||||||| ||||| || ||| ||||| | Sbjct 2472067 AATCGTTGCTTTTGCCGCAGTGGAAGGAATTTTCTTCTCTGGGTCCTT-TGCAGCTATCT 2472009 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 |||| | || ||||| ||| | ||||| ||| | ||||||||||||||| || || Sbjct 2472008 TTTGGCTTAAAAAGCGAGGTTTGATGCCTGGCTTGACCTTCTCAAATGAACTGATCTCAA 2471949 Query 65201 GAGATGAGGGT 65211 ||||||||||| Sbjct 2471948 GAGATGAGGGT 2471938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596530927375680