Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq14 127 3e-24 >seq14 Length=1680605 Score = 127 bits (140), Expect = 3e-24 Identities = 135/178 (76%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 35580 GTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACG 35639 || |||||| || || || |||||||| |||||||| ||||| || || || || ||| Sbjct 5579 GTCGTGTTGGAAAATTCAAGCGTCACATGTCCTTCCCATTCAGGCTCAAGGGGGGTGACG 5638 Query 35640 TTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTG 35699 ||||| || || ||||||||||| ||||| || || ||||| ||||| || || | Sbjct 5639 TTGACAATAATGCCACAGCGCGCATAGGTAGATTTTCCTAAACAAACCACCAGAACATCA 5698 Query 35700 CGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCA 35757 || ||||| ||||| ||||| ||||| || || || | ||||| || || ||||||| Sbjct 5699 CGGGGAATACGGAAATATTCCACCGTACGAGCGAGCACAAAGCTATTGGGGGGAATCA 5756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825863259943440